RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 POLD1P28340 1107 aa13.47□□□□□ -0.25
TGFB1-203ENST00000598758 SLC27A3Q5K4L6 730 aa13.47□□□□□ -0.25
TGFB1-203ENST00000598758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.47□□□□□ -0.25
TGFB1-203ENST00000598758 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
TGFB1-203ENST00000598758 TOGARAM1Q9Y4F4 1720 aa13.46□□□□□ -0.25
TGFB1-203ENST00000598758 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
TGFB1-203ENST00000598758 ADCY9O60503 1353 aa13.45□□□□□ -0.26
TGFB1-203ENST00000598758 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
TGFB1-203ENST00000598758 L3MBTL2Q969R5 705 aa13.44□□□□□ -0.26
TGFB1-203ENST00000598758 ANKRD36BQ8N2N9 1353 aa13.44□□□□□ -0.26
TGFB1-203ENST00000598758 MEGF6O75095 1541 aa13.44□□□□□ -0.26
TGFB1-203ENST00000598758 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
TGFB1-203ENST00000598758 PRIM1P49642 420 aaKnown RBP13.42□□□□□ -0.26
TGFB1-203ENST00000598758 MSL1Q68DK7 614 aa13.42□□□□□ -0.26
TGFB1-203ENST00000598758 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
TGFB1-203ENST00000598758 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
TGFB1-203ENST00000598758 ITGB4P16144 1822 aa13.41□□□□□ -0.26
TGFB1-203ENST00000598758 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
TGFB1-203ENST00000598758 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
TGFB1-203ENST00000598758 EDC4Q6P2E9 1401 aaKnown RBP13.4□□□□□ -0.26
TGFB1-203ENST00000598758 LTV1Q96GA3 475 aaPredicted RBP13.4□□□□□ -0.26
TGFB1-203ENST00000598758 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
TGFB1-203ENST00000598758 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
TGFB1-203ENST00000598758 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
TGFB1-203ENST00000598758 HSPA6P17066 643 aa13.38□□□□□ -0.27
TGFB1-203ENST00000598758 ZNF526Q8TF50 670 aaPredicted RBP13.38□□□□□ -0.27
TGFB1-203ENST00000598758 IP6K1Q92551 441 aa13.38□□□□□ -0.27
TGFB1-203ENST00000598758 KIAA1551Q9HCM1 1747 aa13.38□□□□□ -0.27
TGFB1-203ENST00000598758 SLC12A5Q9H2X9 1139 aa13.37□□□□□ -0.27
TGFB1-203ENST00000598758 GPBP1L1Q9HC44 474 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-203ENST00000598758 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
TGFB1-203ENST00000598758 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
TGFB1-203ENST00000598758 CICQ96RK0 1608 aaPredicted RBP13.36□□□□□ -0.27
TGFB1-203ENST00000598758 FBLN1P23142 703 aa13.36□□□□□ -0.27
TGFB1-203ENST00000598758 AMIGO3Q86WK7 504 aa13.36□□□□□ -0.27
TGFB1-203ENST00000598758 SIN3AQ96ST3 1273 aa13.36□□□□□ -0.27
TGFB1-203ENST00000598758 PCNTO95613 3336 aa13.36□□□□□ -0.27
TGFB1-203ENST00000598758 ZCRB1Q8TBF4 217 aaKnown RBP13.35□□□□□ -0.27
TGFB1-203ENST00000598758 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
TGFB1-203ENST00000598758 MAP3K19Q56UN5 1328 aa13.35□□□□□ -0.27
TGFB1-203ENST00000598758 USP47Q96K76 1375 aa13.34□□□□□ -0.27
TGFB1-203ENST00000598758 HOXC9P31274 260 aa13.34□□□□□ -0.27
TGFB1-203ENST00000598758 WWC3Q9ULE0 1092 aa13.34□□□□□ -0.27
TGFB1-203ENST00000598758 CD2APQ9Y5K6 639 aa13.34□□□□□ -0.27
TGFB1-203ENST00000598758 N4BP2Q86UW6 1770 aaPredicted RBP13.34□□□□□ -0.27
TGFB1-203ENST00000598758 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
TGFB1-203ENST00000598758 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.27
TGFB1-203ENST00000598758 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
TGFB1-203ENST00000598758 KIF3CO14782 793 aa13.32□□□□□ -0.28
TGFB1-203ENST00000598758 SMIM5Q71RC9 77 aa13.32□□□□□ -0.28
TGFB1-203ENST00000598758 USHBP1Q8N6Y0 703 aa13.32□□□□□ -0.28
TGFB1-203ENST00000598758 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
TGFB1-203ENST00000598758 BRCA1P38398 1863 aaKnown RBP13.31□□□□□ -0.28
TGFB1-203ENST00000598758 WDR90Q96KV7 1748 aa13.31□□□□□ -0.28
TGFB1-203ENST00000598758 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
TGFB1-203ENST00000598758 KIF20BQ96Q89 1820 aa13.3□□□□□ -0.28
TGFB1-203ENST00000598758 NBPF6Q5VWK0 638 aa13.3□□□□□ -0.28
TGFB1-203ENST00000598758 NBPF4Q96M43 638 aa13.3□□□□□ -0.28
TGFB1-203ENST00000598758 TERF2IPQ9NYB0 399 aa13.29□□□□□ -0.28
TGFB1-203ENST00000598758 RTL1A6NKG5 1358 aa13.29□□□□□ -0.28
TGFB1-203ENST00000598758 AMPHP49418 695 aa13.28□□□□□ -0.28
TGFB1-203ENST00000598758 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
TGFB1-203ENST00000598758 PXDNLA1KZ92 1463 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 PHF14O94880 888 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
TGFB1-203ENST00000598758 DNAJC5GQ8N7S2 189 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 COG3Q96JB2 828 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
TGFB1-203ENST00000598758 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
TGFB1-203ENST00000598758 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
TGFB1-203ENST00000598758 CYP27B1O15528 508 aa13.25□□□□□ -0.29
TGFB1-203ENST00000598758 MPRIPQ6WCQ1 1025 aa13.25□□□□□ -0.29
TGFB1-203ENST00000598758 ANKRD26Q9UPS8 1709 aa13.25□□□□□ -0.29
TGFB1-203ENST00000598758 PCDH11XQ9BZA7 1347 aa13.24□□□□□ -0.29
TGFB1-203ENST00000598758 PCDH11YQ9BZA8 1340 aa13.24□□□□□ -0.29
TGFB1-203ENST00000598758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
TGFB1-203ENST00000598758 AK7Q96M32 723 aa13.24□□□□□ -0.29
TGFB1-203ENST00000598758 C4AP0C0L4 1744 aa13.23□□□□□ -0.29
TGFB1-203ENST00000598758 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-203ENST00000598758 APLP1P51693 650 aa13.23□□□□□ -0.29
TGFB1-203ENST00000598758 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
TGFB1-203ENST00000598758 RAPGEF4Q8WZA2 1011 aa13.23□□□□□ -0.29
TGFB1-203ENST00000598758 TESK2Q96S53 571 aa13.23□□□□□ -0.29
TGFB1-203ENST00000598758 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
TGFB1-203ENST00000598758 TATP17735 454 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-203ENST00000598758 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
TGFB1-203ENST00000598758 PUS7Q96PZ0 661 aaKnown RBP13.22□□□□□ -0.29
TGFB1-203ENST00000598758 NCAPD2Q15021 1401 aa13.22□□□□□ -0.29
TGFB1-203ENST00000598758 MYH14Q7Z406 1995 aaKnown RBP13.21□□□□□ -0.29
TGFB1-203ENST00000598758 SBF1O95248 1867 aa13.21□□□□□ -0.29
TGFB1-203ENST00000598758 PIGBQ92521 554 aa13.21□□□□□ -0.29
TGFB1-203ENST00000598758 NMRK2Q9NPI5 230 aa13.21□□□□□ -0.29
TGFB1-203ENST00000598758 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
TGFB1-203ENST00000598758 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
TGFB1-203ENST00000598758 INSRP06213 1382 aa13.2□□□□□ -0.3
TGFB1-203ENST00000598758 SSFA2P28290 1259 aa13.2□□□□□ -0.3
TGFB1-203ENST00000598758 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
TGFB1-203ENST00000598758 HTRA3P83110 453 aa13.2□□□□□ -0.3
TGFB1-203ENST00000598758 ITPK1Q13572 414 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms