RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TNNT2P45379 298 aaPredicted RBP19■□□□□ 0.63
SCAF1-203ENST00000598359 PANK3Q9H999 370 aa19■□□□□ 0.63
SCAF1-203ENST00000598359 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
SCAF1-203ENST00000598359 TXNRD1Q16881 649 aa18.99■□□□□ 0.63
SCAF1-203ENST00000598359 CHD4Q14839 1912 aa18.98■□□□□ 0.63
SCAF1-203ENST00000598359 ZCRB1Q8TBF4 217 aaKnown RBP18.98■□□□□ 0.63
SCAF1-203ENST00000598359 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
SCAF1-203ENST00000598359 BTAF1O14981 1849 aa18.96■□□□□ 0.63
SCAF1-203ENST00000598359 KIF24Q5T7B8 1368 aa18.95■□□□□ 0.62
SCAF1-203ENST00000598359 RAPGEF4Q8WZA2 1011 aa18.95■□□□□ 0.62
SCAF1-203ENST00000598359 PDGFDQ9GZP0 370 aaPredicted RBP18.95■□□□□ 0.62
SCAF1-203ENST00000598359 POLKQ9UBT6 870 aa18.95■□□□□ 0.62
SCAF1-203ENST00000598359 ZNF784Q8NCA9 323 aaPredicted RBP18.94■□□□□ 0.62
SCAF1-203ENST00000598359 SYTL4Q96C24 671 aaPredicted RBP18.94■□□□□ 0.62
SCAF1-203ENST00000598359 ANKRD26Q9UPS8 1709 aa18.94■□□□□ 0.62
SCAF1-203ENST00000598359 TATP17735 454 aaPredicted RBP18.93■□□□□ 0.62
SCAF1-203ENST00000598359 PRIM1P49642 420 aaKnown RBP18.93■□□□□ 0.62
SCAF1-203ENST00000598359 DOT1LQ8TEK3 1739 aa18.93■□□□□ 0.62
SCAF1-203ENST00000598359 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
SCAF1-203ENST00000598359 MAP2P11137 1827 aaKnown RBP18.92■□□□□ 0.62
SCAF1-203ENST00000598359 WASHC2AQ641Q2 1341 aa18.92■□□□□ 0.62
SCAF1-203ENST00000598359 SENP3-EIF4A1A0A087X0R7 540 aa18.91■□□□□ 0.62
SCAF1-203ENST00000598359 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
SCAF1-203ENST00000598359 STK32BQ9NY57 414 aa18.91■□□□□ 0.62
SCAF1-203ENST00000598359 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
SCAF1-203ENST00000598359 IFFO2Q5TF58 517 aa18.9■□□□□ 0.62
SCAF1-203ENST00000598359 LRRC4BQ9NT99 713 aa18.9■□□□□ 0.62
SCAF1-203ENST00000598359 NSD2O96028 1365 aa18.9■□□□□ 0.62
SCAF1-203ENST00000598359 CASZ1Q86V15 1759 aa18.89■□□□□ 0.61
SCAF1-203ENST00000598359 KCNQ4P56696 695 aa18.89■□□□□ 0.61
SCAF1-203ENST00000598359 SLC15A2Q16348 729 aa18.89■□□□□ 0.61
SCAF1-203ENST00000598359 EYA1Q99502 592 aa18.89■□□□□ 0.61
SCAF1-203ENST00000598359 ZBTB7AO95365 584 aa18.88■□□□□ 0.61
SCAF1-203ENST00000598359 EIF4A2Q14240 407 aaKnown RBP18.88■□□□□ 0.61
SCAF1-203ENST00000598359 CYP27B1O15528 508 aa18.87■□□□□ 0.61
SCAF1-203ENST00000598359 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
SCAF1-203ENST00000598359 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
SCAF1-203ENST00000598359 PAPPAQ13219 1627 aa18.86■□□□□ 0.61
SCAF1-203ENST00000598359 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
SCAF1-203ENST00000598359 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
SCAF1-203ENST00000598359 ZNF827Q17R98 1081 aa18.86■□□□□ 0.61
SCAF1-203ENST00000598359 KNSTRNQ9Y448 316 aa18.86■□□□□ 0.61
SCAF1-203ENST00000598359 C1QTNF8P60827 252 aa18.84■□□□□ 0.61
SCAF1-203ENST00000598359 ATF5Q9Y2D1 282 aaPredicted RBP18.84■□□□□ 0.61
SCAF1-203ENST00000598359 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.61
SCAF1-203ENST00000598359 AMER1Q5JTC6 1135 aaPredicted RBP18.82■□□□□ 0.6
SCAF1-203ENST00000598359 TOGARAM1Q9Y4F4 1720 aa18.82■□□□□ 0.6
SCAF1-203ENST00000598359 MPRIPQ6WCQ1 1025 aa18.81■□□□□ 0.6
SCAF1-203ENST00000598359 CNGB1Q14028 1251 aaPredicted RBP18.8■□□□□ 0.6
SCAF1-203ENST00000598359 SLC27A3Q5K4L6 730 aa18.8■□□□□ 0.6
SCAF1-203ENST00000598359 AKT1S1Q96B36 256 aa18.8■□□□□ 0.6
SCAF1-203ENST00000598359 SPG7Q9UQ90 795 aa18.8■□□□□ 0.6
SCAF1-203ENST00000598359 LY75O60449 1722 aa18.8■□□□□ 0.6
SCAF1-203ENST00000598359 PTGER2P43116 358 aa18.79■□□□□ 0.6
SCAF1-203ENST00000598359 CCNL1Q9UK58 526 aaPredicted RBP18.79■□□□□ 0.6
SCAF1-203ENST00000598359 IGSF1Q8N6C5 1336 aa18.78■□□□□ 0.6
SCAF1-203ENST00000598359 CEP350Q5VT06 3117 aa18.77■□□□□ 0.6
SCAF1-203ENST00000598359 PER1O15534 1290 aaPredicted RBP18.77■□□□□ 0.6
SCAF1-203ENST00000598359 CC2D1BQ5T0F9 858 aaKnown RBP18.77■□□□□ 0.6
SCAF1-203ENST00000598359 AEBP1Q8IUX7 1158 aa18.77■□□□□ 0.6
SCAF1-203ENST00000598359 PHKG2P15735 406 aa18.76■□□□□ 0.59
SCAF1-203ENST00000598359 PIGBQ92521 554 aa18.76■□□□□ 0.59
SCAF1-203ENST00000598359 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
SCAF1-203ENST00000598359 SYT17Q9BSW7 474 aa18.75■□□□□ 0.59
SCAF1-203ENST00000598359 FHDC1Q9C0D6 1143 aaPredicted RBP18.75■□□□□ 0.59
SCAF1-203ENST00000598359 MTFR1LQ9H019 292 aa18.75■□□□□ 0.59
SCAF1-203ENST00000598359 TFCP2L1Q9NZI6 479 aa18.75■□□□□ 0.59
SCAF1-203ENST00000598359 PALLDQ8WX93 1383 aa18.75■□□□□ 0.59
SCAF1-203ENST00000598359 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
SCAF1-203ENST00000598359 ITGB4P16144 1822 aa18.74■□□□□ 0.59
SCAF1-203ENST00000598359 TUBGCP6Q96RT7 1819 aa18.74■□□□□ 0.59
SCAF1-203ENST00000598359 IFNL2Q8IZJ0 200 aa18.74■□□□□ 0.59
SCAF1-203ENST00000598359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCAF1-203ENST00000598359 SGIP1Q9BQI5 828 aa18.73■□□□□ 0.59
SCAF1-203ENST00000598359 IL13P35225 146 aa18.72■□□□□ 0.59
SCAF1-203ENST00000598359 MTHFSP49914 203 aa18.72■□□□□ 0.59
SCAF1-203ENST00000598359 SULT6B1Q6IMI4 303 aa18.71■□□□□ 0.59
SCAF1-203ENST00000598359 ZNF530Q6P9A1 599 aaPredicted RBP18.7■□□□□ 0.58
SCAF1-203ENST00000598359 TMOD3Q9NYL9 352 aa18.7■□□□□ 0.58
SCAF1-203ENST00000598359 ASAP1Q9ULH1 1129 aa18.7■□□□□ 0.58
SCAF1-203ENST00000598359 C5P01031 1676 aa18.69■□□□□ 0.58
SCAF1-203ENST00000598359 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
SCAF1-203ENST00000598359 MSH5O43196 834 aa18.69■□□□□ 0.58
SCAF1-203ENST00000598359 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
SCAF1-203ENST00000598359 GOLGB1Q14789 3259 aaKnown RBP18.68■□□□□ 0.58
SCAF1-203ENST00000598359 SMIM5Q71RC9 77 aa18.68■□□□□ 0.58
SCAF1-203ENST00000598359 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
SCAF1-203ENST00000598359 COL23A1Q86Y22 540 aaPredicted RBP18.67■□□□□ 0.58
SCAF1-203ENST00000598359 ARXQ96QS3 562 aa18.67■□□□□ 0.58
SCAF1-203ENST00000598359 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-203ENST00000598359 GIGYF1O75420 1035 aaPredicted RBP18.66■□□□□ 0.58
SCAF1-203ENST00000598359 HMOX1P09601 288 aa18.66■□□□□ 0.58
SCAF1-203ENST00000598359 AMIGO3Q86WK7 504 aa18.66■□□□□ 0.58
SCAF1-203ENST00000598359 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 SIK1P57059 783 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 SLC16A10Q8TF71 515 aa18.65■□□□□ 0.58
SCAF1-203ENST00000598359 ATG3Q9NT62 314 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms