RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 GRM5P41594 1212 aa10.68□□□□□ -0.7
FARP1-223ENST00000598346 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
FARP1-223ENST00000598346 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
FARP1-223ENST00000598346 PCDHB11Q9Y5F2 797 aa10.68□□□□□ -0.7
FARP1-223ENST00000598346 ATP5J2-PTCD1G3V325 749 aa10.67□□□□□ -0.7
FARP1-223ENST00000598346 SNRPBP14678 240 aaKnown RBP10.67□□□□□ -0.7
FARP1-223ENST00000598346 CAPN5O15484 640 aaPredicted RBP10.66□□□□□ -0.7
FARP1-223ENST00000598346 CSB-PGBD3P0DP91 1061 aa10.66□□□□□ -0.7
FARP1-223ENST00000598346 FSHRP23945 695 aa10.66□□□□□ -0.7
FARP1-223ENST00000598346 NFX1Q12986 1120 aaKnown RBP10.66□□□□□ -0.7
FARP1-223ENST00000598346 NOD1Q9Y239 953 aa10.66□□□□□ -0.7
FARP1-223ENST00000598346 FAM196BA6NMK8 535 aa10.65□□□□□ -0.7
FARP1-223ENST00000598346 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
FARP1-223ENST00000598346 ADH1CP00326 375 aa10.65□□□□□ -0.7
FARP1-223ENST00000598346 RASA1P20936 1047 aa10.65□□□□□ -0.7
FARP1-223ENST00000598346 CRTC2Q53ET0 693 aaPredicted RBP10.65□□□□□ -0.7
FARP1-223ENST00000598346 TERTO14746 1132 aaKnown RBP10.64□□□□□ -0.71
FARP1-223ENST00000598346 USP4Q13107 963 aa10.64□□□□□ -0.71
FARP1-223ENST00000598346 ELOAQ14241 798 aaKnown RBP10.64□□□□□ -0.71
FARP1-223ENST00000598346 TRIM50Q86XT4 487 aa10.64□□□□□ -0.71
FARP1-223ENST00000598346 TRAIPQ9BWF2 469 aa10.64□□□□□ -0.71
FARP1-223ENST00000598346 USP17L15C9J2P7 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L10C9JJH3 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L13C9JLJ4 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L12C9JPN9 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L11C9JVI0 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L21D6R901 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L18D6R9N7 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L22D6RA61 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L17D6RBQ6 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L19D6RCP7 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L20D6RJB6 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 CLDN10P78369 228 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USP17L24Q0WX57 530 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 PTK7Q13308 1070 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
FARP1-223ENST00000598346 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 USTQ9Y2C2 406 aa10.63□□□□□ -0.71
FARP1-223ENST00000598346 WIPF1O43516 503 aa10.62□□□□□ -0.71
FARP1-223ENST00000598346 PDE4CQ08493 712 aa10.62□□□□□ -0.71
FARP1-223ENST00000598346 NR5A1Q13285 461 aa10.62□□□□□ -0.71
FARP1-223ENST00000598346 SIRT1Q96EB6 747 aa10.62□□□□□ -0.71
FARP1-223ENST00000598346 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
FARP1-223ENST00000598346 NOVA2Q9UNW9 492 aaKnown RBP10.62□□□□□ -0.71
FARP1-223ENST00000598346 SCTRP47872 440 aa10.61□□□□□ -0.71
FARP1-223ENST00000598346 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
FARP1-223ENST00000598346 GTF2IP78347 998 aa10.61□□□□□ -0.71
FARP1-223ENST00000598346 INSM1Q01101 510 aaPredicted RBP10.61□□□□□ -0.71
FARP1-223ENST00000598346 DHX9Q08211 1270 aaKnown RBP10.61□□□□□ -0.71
FARP1-223ENST00000598346 DNAAF2Q9NVR5 837 aaKnown RBP10.61□□□□□ -0.71
FARP1-223ENST00000598346 NR3C2P08235 984 aa10.6□□□□□ -0.71
FARP1-223ENST00000598346 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
FARP1-223ENST00000598346 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
FARP1-223ENST00000598346 STK32AQ8WU08 396 aa10.6□□□□□ -0.71
FARP1-223ENST00000598346 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
FARP1-223ENST00000598346 TMPRSS4Q9NRS4 437 aa10.6□□□□□ -0.71
FARP1-223ENST00000598346 CARNS1A5YM72 827 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
FARP1-223ENST00000598346 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 LARGE2Q8N3Y3 721 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 KIAA1024Q9UPX6 916 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 PCDHGA11Q9Y5H2 935 aa10.59□□□□□ -0.71
FARP1-223ENST00000598346 ZBTB7BO15156 539 aaPredicted RBP10.58□□□□□ -0.72
FARP1-223ENST00000598346 NNTQ13423 1086 aa10.58□□□□□ -0.72
FARP1-223ENST00000598346 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
FARP1-223ENST00000598346 TMEM164Q5U3C3 297 aa10.58□□□□□ -0.72
FARP1-223ENST00000598346 ANKMY2Q8IV38 441 aa10.58□□□□□ -0.72
FARP1-223ENST00000598346 NPAS3Q8IXF0 933 aa10.58□□□□□ -0.72
FARP1-223ENST00000598346 CYLDQ9NQC7 956 aa10.58□□□□□ -0.72
FARP1-223ENST00000598346 CC2D2BQ6DHV5 1058 aa10.57□□□□□ -0.72
FARP1-223ENST00000598346 TRIM46Q7Z4K8 759 aa10.57□□□□□ -0.72
FARP1-223ENST00000598346 SIX5Q8N196 739 aa10.57□□□□□ -0.72
FARP1-223ENST00000598346 ZNF784Q8NCA9 323 aaPredicted RBP10.57□□□□□ -0.72
FARP1-223ENST00000598346 FAM200AQ8TCP9 573 aa10.57□□□□□ -0.72
FARP1-223ENST00000598346 DKK1O94907 266 aa10.56□□□□□ -0.72
FARP1-223ENST00000598346 BMP1P13497 986 aa10.56□□□□□ -0.72
FARP1-223ENST00000598346 DPYDQ12882 1025 aa10.56□□□□□ -0.72
FARP1-223ENST00000598346 TRIM52Q96A61 297 aa10.56□□□□□ -0.72
FARP1-223ENST00000598346 NXF1Q9UBU9 619 aaKnown RBP10.56□□□□□ -0.72
FARP1-223ENST00000598346 STK17AQ9UEE5 414 aa10.56□□□□□ -0.72
FARP1-223ENST00000598346 LILRA1O75019 489 aa10.55□□□□□ -0.72
FARP1-223ENST00000598346 PSME1Q06323 249 aa10.55□□□□□ -0.72
FARP1-223ENST00000598346 SCARF1Q14162 830 aa10.55□□□□□ -0.72
FARP1-223ENST00000598346 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
FARP1-223ENST00000598346 ESF1Q9H501 851 aaKnown RBP10.55□□□□□ -0.72
FARP1-223ENST00000598346 CCDC102BQ68D86 513 aa10.54□□□□□ -0.72
FARP1-223ENST00000598346 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
FARP1-223ENST00000598346 PGPEP1Q9NXJ5 209 aa10.54□□□□□ -0.72
FARP1-223ENST00000598346 EMILIN1Q9Y6C2 1016 aa10.54□□□□□ -0.72
FARP1-223ENST00000598346 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
FARP1-223ENST00000598346 FAM69CQ0P6D2 419 aa10.53□□□□□ -0.72
FARP1-223ENST00000598346 TRIM26Q12899 539 aaPredicted RBP10.52□□□□□ -0.73
FARP1-223ENST00000598346 MRPL14Q6P1L8 145 aaKnown RBP10.52□□□□□ -0.73
FARP1-223ENST00000598346 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
FARP1-223ENST00000598346 RBM19Q9Y4C8 960 aaKnown RBP10.52□□□□□ -0.73
FARP1-223ENST00000598346 TIMP2P16035 220 aa10.51□□□□□ -0.73
FARP1-223ENST00000598346 ADD1P35611 737 aaKnown RBP10.51□□□□□ -0.73
FARP1-223ENST00000598346 SEC13P55735 322 aa10.51□□□□□ -0.73
FARP1-223ENST00000598346 SFI1A8K8P3 1242 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms