RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 CCDC146Q8IYE0 955 aa21.11■□□□□ 0.97
LTBP4-222ENST00000598256 SHANK3Q9BYB0 1731 aa21.11■□□□□ 0.97
LTBP4-222ENST00000598256 SPATA31A1Q5TZJ5 1347 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 SPATA31A5Q5VU36 1347 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 SPATA31A7Q8IWB4 1347 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 MAPK8IP3Q9UPT6 1336 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 RAPGEF4Q8WZA2 1011 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
LTBP4-222ENST00000598256 TCP11L2Q8N4U5 519 aa21.08■□□□□ 0.97
LTBP4-222ENST00000598256 RUNDC1Q96C34 613 aa21.08■□□□□ 0.97
LTBP4-222ENST00000598256 IL2RBP14784 551 aa21.07■□□□□ 0.96
LTBP4-222ENST00000598256 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
LTBP4-222ENST00000598256 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
LTBP4-222ENST00000598256 THSD7AQ9UPZ6 1657 aa21.07■□□□□ 0.96
LTBP4-222ENST00000598256 OVOS2A0A0G2JMS6 1433 aa21.06■□□□□ 0.96
LTBP4-222ENST00000598256 DISP2A7MBM2 1401 aa21.06■□□□□ 0.96
LTBP4-222ENST00000598256 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
LTBP4-222ENST00000598256 PLEKHF1Q96S99 279 aa21.05■□□□□ 0.96
LTBP4-222ENST00000598256 PLEKHG2Q9H7P9 1386 aa21.05■□□□□ 0.96
LTBP4-222ENST00000598256 BARGINQ6ZT62 677 aa21.02■□□□□ 0.96
LTBP4-222ENST00000598256 PHACTR3Q96KR7 559 aa21.02■□□□□ 0.96
LTBP4-222ENST00000598256 CDCA7Q9BWT1 371 aaPredicted RBP21.02■□□□□ 0.96
LTBP4-222ENST00000598256 A0A0G2JS52 829 aa21.01■□□□□ 0.95
LTBP4-222ENST00000598256 MYT1Q01538 1121 aa21.01■□□□□ 0.95
LTBP4-222ENST00000598256 PLEKHO1Q53GL0 409 aaPredicted RBP21.01■□□□□ 0.95
LTBP4-222ENST00000598256 TNS2Q63HR2 1409 aa21.01■□□□□ 0.95
LTBP4-222ENST00000598256 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
LTBP4-222ENST00000598256 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
LTBP4-222ENST00000598256 APAF1O14727 1248 aa21■□□□□ 0.95
LTBP4-222ENST00000598256 FAM98CQ17RN3 349 aaKnown RBP21■□□□□ 0.95
LTBP4-222ENST00000598256 AMOTQ4VCS5 1084 aa21■□□□□ 0.95
LTBP4-222ENST00000598256 GAS2L2Q8NHY3 880 aa21■□□□□ 0.95
LTBP4-222ENST00000598256 SENP3-EIF4A1A0A087X0R7 540 aa20.99■□□□□ 0.95
LTBP4-222ENST00000598256 SPG7Q9UQ90 795 aa20.99■□□□□ 0.95
LTBP4-222ENST00000598256 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
LTBP4-222ENST00000598256 MTHFSDQ2M296 383 aaKnown RBP20.98■□□□□ 0.95
LTBP4-222ENST00000598256 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
LTBP4-222ENST00000598256 NEUROD2Q15784 382 aa20.97■□□□□ 0.95
LTBP4-222ENST00000598256 NFE2L2Q16236 605 aa20.97■□□□□ 0.95
LTBP4-222ENST00000598256 ZNF530Q6P9A1 599 aaPredicted RBP20.97■□□□□ 0.95
LTBP4-222ENST00000598256 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
LTBP4-222ENST00000598256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.97■□□□□ 0.95
LTBP4-222ENST00000598256 PCDH11XQ9BZA7 1347 aa20.97■□□□□ 0.95
LTBP4-222ENST00000598256 PCDH11YQ9BZA8 1340 aa20.97■□□□□ 0.95
LTBP4-222ENST00000598256 TMPOP42166 694 aaKnown RBP20.96■□□□□ 0.95
LTBP4-222ENST00000598256 SEPT12Q8IYM1 358 aa20.96■□□□□ 0.95
LTBP4-222ENST00000598256 ZCRB1Q8TBF4 217 aaKnown RBP20.96■□□□□ 0.95
LTBP4-222ENST00000598256 DDB1Q16531 1140 aa20.95■□□□□ 0.94
LTBP4-222ENST00000598256 C1orf141Q5JVX7 400 aa20.95■□□□□ 0.94
LTBP4-222ENST00000598256 MAP3K5Q99683 1374 aa20.95■□□□□ 0.94
LTBP4-222ENST00000598256 DOT1LQ8TEK3 1739 aa20.95■□□□□ 0.94
LTBP4-222ENST00000598256 LRP5O75197 1615 aa20.94■□□□□ 0.94
LTBP4-222ENST00000598256 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
LTBP4-222ENST00000598256 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
LTBP4-222ENST00000598256 SALL2Q9Y467 1007 aaPredicted RBP20.94■□□□□ 0.94
LTBP4-222ENST00000598256 TOGARAM1Q9Y4F4 1720 aa20.93■□□□□ 0.94
LTBP4-222ENST00000598256 EXOC5O00471 708 aa20.93■□□□□ 0.94
LTBP4-222ENST00000598256 RIPK4P57078 832 aa20.93■□□□□ 0.94
LTBP4-222ENST00000598256 ITGB4P16144 1822 aa20.92■□□□□ 0.94
LTBP4-222ENST00000598256 KAT6BQ8WYB5 2073 aa20.92■□□□□ 0.94
LTBP4-222ENST00000598256 LMOD3Q0VAK6 560 aa20.92■□□□□ 0.94
LTBP4-222ENST00000598256 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
LTBP4-222ENST00000598256 AKAP4Q5JQC9 854 aa20.91■□□□□ 0.94
LTBP4-222ENST00000598256 IFNL2Q8IZJ0 200 aa20.91■□□□□ 0.94
LTBP4-222ENST00000598256 NGEFQ8N5V2 710 aa20.91■□□□□ 0.94
LTBP4-222ENST00000598256 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
LTBP4-222ENST00000598256 SIPA1L3O60292 1781 aaPredicted RBP20.9■□□□□ 0.94
LTBP4-222ENST00000598256 PHKG2P15735 406 aa20.9■□□□□ 0.94
LTBP4-222ENST00000598256 SF3B2Q13435 895 aaKnown RBP20.9■□□□□ 0.94
LTBP4-222ENST00000598256 RTF1Q92541 710 aaKnown RBP20.9■□□□□ 0.94
LTBP4-222ENST00000598256 CYP27B1O15528 508 aa20.89■□□□□ 0.93
LTBP4-222ENST00000598256 PSDA5PKW4 1024 aaPredicted RBP20.88■□□□□ 0.93
LTBP4-222ENST00000598256 KRT27Q7Z3Y8 459 aa20.88■□□□□ 0.93
LTBP4-222ENST00000598256 SBF2Q86WG5 1849 aa20.88■□□□□ 0.93
LTBP4-222ENST00000598256 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
LTBP4-222ENST00000598256 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
LTBP4-222ENST00000598256 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
LTBP4-222ENST00000598256 NCBP3Q53F19 620 aaKnown RBP20.87■□□□□ 0.93
LTBP4-222ENST00000598256 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
LTBP4-222ENST00000598256 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
LTBP4-222ENST00000598256 HTATSF1O43719 755 aaKnown RBP20.86■□□□□ 0.93
LTBP4-222ENST00000598256 TRIM35Q9UPQ4 493 aa20.86■□□□□ 0.93
LTBP4-222ENST00000598256 DCTN1Q14203 1278 aa20.85■□□□□ 0.93
LTBP4-222ENST00000598256 MPRIPQ6WCQ1 1025 aa20.85■□□□□ 0.93
LTBP4-222ENST00000598256 MRC1P22897 1456 aa20.84■□□□□ 0.93
LTBP4-222ENST00000598256 MCM10Q7L590 875 aa20.84■□□□□ 0.93
LTBP4-222ENST00000598256 WWC1Q8IX03 1113 aa20.84■□□□□ 0.93
LTBP4-222ENST00000598256 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
LTBP4-222ENST00000598256 NHSQ6T4R5 1651 aa20.83■□□□□ 0.93
LTBP4-222ENST00000598256 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
LTBP4-222ENST00000598256 KDM3BQ7LBC6 1761 aa20.82■□□□□ 0.92
LTBP4-222ENST00000598256 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
LTBP4-222ENST00000598256 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
LTBP4-222ENST00000598256 BAG6P46379 1132 aa20.81■□□□□ 0.92
LTBP4-222ENST00000598256 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
LTBP4-222ENST00000598256 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
LTBP4-222ENST00000598256 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
LTBP4-222ENST00000598256 TEFQ10587 303 aa20.8■□□□□ 0.92
LTBP4-222ENST00000598256 IL17REQ8NFR9 667 aa20.8■□□□□ 0.92
LTBP4-222ENST00000598256 LGR6Q9HBX8 967 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms