RNA–Protein interactions for RNA: ENST00000597743.5

CALM3-209, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 577 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-209ENST00000597743 ATF5Q9Y2D1 282 aaPredicted RBP35.48■■■■□ 3.27
CALM3-209ENST00000597743 YY1P25490 414 aa35.47■■■■□ 3.27
CALM3-209ENST00000597743 BTAF1O14981 1849 aa35.47■■■■□ 3.27
CALM3-209ENST00000597743 AMER1Q5JTC6 1135 aaPredicted RBP35.46■■■■□ 3.27
CALM3-209ENST00000597743 MTFR1LQ9H019 292 aa35.45■■■■□ 3.27
CALM3-209ENST00000597743 PTGER2P43116 358 aa35.44■■■■□ 3.26
CALM3-209ENST00000597743 RRS1Q15050 365 aaKnown RBP35.43■■■■□ 3.26
CALM3-209ENST00000597743 RTL1A6NKG5 1358 aa35.39■■■■□ 3.26
CALM3-209ENST00000597743 ANKRD26Q9UPS8 1709 aa35.39■■■■□ 3.26
CALM3-209ENST00000597743 SLC27A3Q5K4L6 730 aa35.38■■■■□ 3.25
CALM3-209ENST00000597743 MORC1Q86VD1 984 aa35.38■■■■□ 3.25
CALM3-209ENST00000597743 ZCRB1Q8TBF4 217 aaKnown RBP35.37■■■■□ 3.25
CALM3-209ENST00000597743 SYTL4Q96C24 671 aaPredicted RBP35.37■■■■□ 3.25
CALM3-209ENST00000597743 NPC1L1Q9UHC9 1359 aa35.36■■■■□ 3.25
CALM3-209ENST00000597743 TNNT2P45379 298 aaPredicted RBP35.35■■■■□ 3.25
CALM3-209ENST00000597743 KIF24Q5T7B8 1368 aa35.35■■■■□ 3.25
CALM3-209ENST00000597743 SMG6Q86US8 1419 aaKnown RBP35.34■■■■□ 3.25
CALM3-209ENST00000597743 LRRC4BQ9NT99 713 aa35.34■■■■□ 3.25
CALM3-209ENST00000597743 PAPPAQ13219 1627 aa35.34■■■■□ 3.25
CALM3-209ENST00000597743 PRIM1P49642 420 aaKnown RBP35.33■■■■□ 3.25
CALM3-209ENST00000597743 EMILIN1Q9Y6C2 1016 aa35.33■■■■□ 3.25
CALM3-209ENST00000597743 FHDC1Q9C0D6 1143 aaPredicted RBP35.32■■■■□ 3.24
CALM3-209ENST00000597743 RGPD2P0DJD1 1756 aa35.31■■■■□ 3.24
CALM3-209ENST00000597743 CC2D1BQ5T0F9 858 aaKnown RBP35.31■■■■□ 3.24
CALM3-209ENST00000597743 POLKQ9UBT6 870 aa35.31■■■■□ 3.24
CALM3-209ENST00000597743 FLT4P35916 1363 aa35.3■■■■□ 3.24
CALM3-209ENST00000597743 ZNF827Q17R98 1081 aa35.3■■■■□ 3.24
CALM3-209ENST00000597743 RAPGEF4Q8WZA2 1011 aa35.3■■■■□ 3.24
CALM3-209ENST00000597743 SYT17Q9BSW7 474 aa35.3■■■■□ 3.24
CALM3-209ENST00000597743 NBPF6Q5VWK0 638 aa35.29■■■■□ 3.24
CALM3-209ENST00000597743 NBPF4Q96M43 638 aa35.29■■■■□ 3.24
CALM3-209ENST00000597743 SGIP1Q9BQI5 828 aa35.29■■■■□ 3.24
CALM3-209ENST00000597743 ARXQ96QS3 562 aa35.28■■■■□ 3.24
CALM3-209ENST00000597743 MEGF6O75095 1541 aa35.27■■■■□ 3.24
CALM3-209ENST00000597743 INSRP06213 1382 aa35.26■■■■□ 3.24
CALM3-209ENST00000597743 PPM1GO15355 546 aaPredicted RBP35.26■■■■□ 3.24
CALM3-209ENST00000597743 HSP90AB2PQ58FF8 381 aa35.26■■■■□ 3.24
CALM3-209ENST00000597743 SLC16A10Q8TF71 515 aa35.26■■■■□ 3.24
CALM3-209ENST00000597743 AKT1S1Q96B36 256 aa35.26■■■■□ 3.24
CALM3-209ENST00000597743 DOT1LQ8TEK3 1739 aa35.24■■■■□ 3.23
CALM3-209ENST00000597743 TATP17735 454 aaPredicted RBP35.24■■■■□ 3.23
CALM3-209ENST00000597743 DDX10Q13206 875 aaKnown RBP35.24■■■■□ 3.23
CALM3-209ENST00000597743 USHBP1Q8N6Y0 703 aa35.24■■■■□ 3.23
CALM3-209ENST00000597743 TFCP2L1Q9NZI6 479 aa35.24■■■■□ 3.23
CALM3-209ENST00000597743 CNGB1Q14028 1251 aaPredicted RBP35.21■■■■□ 3.23
CALM3-209ENST00000597743 SHANK3Q9BYB0 1731 aa35.2■■■■□ 3.23
CALM3-209ENST00000597743 MAP2P11137 1827 aaKnown RBP35.2■■■■□ 3.23
CALM3-209ENST00000597743 ZNF316A6NFI3 1004 aaPredicted RBP35.19■■■■□ 3.22
CALM3-209ENST00000597743 POLD1P28340 1107 aa35.19■■■■□ 3.22
CALM3-209ENST00000597743 QSER1Q2KHR3 1735 aa35.18■■■■□ 3.22
CALM3-209ENST00000597743 KCNQ4P56696 695 aa35.18■■■■□ 3.22
CALM3-209ENST00000597743 CCNL1Q9UK58 526 aaPredicted RBP35.18■■■■□ 3.22
CALM3-209ENST00000597743 MAP3K5Q99683 1374 aa35.16■■■■□ 3.22
CALM3-209ENST00000597743 PNPLA7Q6ZV29 1317 aa35.16■■■■□ 3.22
CALM3-209ENST00000597743 PCDH11XQ9BZA7 1347 aa35.16■■■■□ 3.22
CALM3-209ENST00000597743 PCDH11YQ9BZA8 1340 aa35.16■■■■□ 3.22
CALM3-209ENST00000597743 LY75O60449 1722 aa35.15■■■■□ 3.22
CALM3-209ENST00000597743 HMGB2P26583 209 aaKnown RBP35.15■■■■□ 3.22
CALM3-209ENST00000597743 MTHFSP49914 203 aa35.1■■■■□ 3.21
CALM3-209ENST00000597743 KLHL34Q8N239 644 aa35.09■■■■□ 3.21
CALM3-209ENST00000597743 MSH5O43196 834 aa35.07■■■■□ 3.2
CALM3-209ENST00000597743 EIF4A2Q14240 407 aaKnown RBP35.07■■■■□ 3.2
CALM3-209ENST00000597743 TUBGCP6Q96RT7 1819 aa35.06■■■■□ 3.2
CALM3-209ENST00000597743 UTRNP46939 3433 aa35.06■■■■□ 3.2
CALM3-209ENST00000597743 CHD4Q14839 1912 aa35.05■■■■□ 3.2
CALM3-209ENST00000597743 GPR162Q16538 588 aa35.04■■■■□ 3.2
CALM3-209ENST00000597743 MPRIPQ6WCQ1 1025 aa35.04■■■■□ 3.2
CALM3-209ENST00000597743 CYP27B1O15528 508 aa35.02■■■■□ 3.2
CALM3-209ENST00000597743 COL24A1Q17RW2 1714 aa35.01■■■■□ 3.2
CALM3-209ENST00000597743 EYA1Q99502 592 aa35.01■■■■□ 3.2
CALM3-209ENST00000597743 SPG7Q9UQ90 795 aa35.01■■■■□ 3.2
CALM3-209ENST00000597743 PPP2R1AP30153 589 aa35■■■■□ 3.19
CALM3-209ENST00000597743 SMARCC1Q92922 1105 aaPredicted RBP35■■■■□ 3.19
CALM3-209ENST00000597743 PALLDQ8WX93 1383 aa35■■■■□ 3.19
CALM3-209ENST00000597743 ZNF784Q8NCA9 323 aaPredicted RBP34.99■■■■□ 3.19
CALM3-209ENST00000597743 COL23A1Q86Y22 540 aaPredicted RBP34.98■■■■□ 3.19
CALM3-209ENST00000597743 FLAD1Q8NFF5 587 aa34.98■■■■□ 3.19
CALM3-209ENST00000597743 NCAPD2Q15021 1401 aa34.98■■■■□ 3.19
CALM3-209ENST00000597743 IL13P35225 146 aa34.96■■■■□ 3.19
CALM3-209ENST00000597743 PELP1Q8IZL8 1130 aaKnown RBP34.95■■■■□ 3.19
CALM3-209ENST00000597743 C5P01031 1676 aa34.95■■■■□ 3.18
CALM3-209ENST00000597743 PKD1L3Q7Z443 1732 aa34.95■■■■□ 3.18
CALM3-209ENST00000597743 IGSF1Q8N6C5 1336 aa34.94■■■■□ 3.18
CALM3-209ENST00000597743 NKX1-1Q15270 411 aaPredicted RBP34.93■■■■□ 3.18
CALM3-209ENST00000597743 RALBP1Q15311 655 aa34.93■■■■□ 3.18
CALM3-209ENST00000597743 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.93■■■■□ 3.18
CALM3-209ENST00000597743 ITGB4P16144 1822 aa34.92■■■■□ 3.18
CALM3-209ENST00000597743 DIAPH1O60610 1272 aaKnown RBP34.9■■■■□ 3.18
CALM3-209ENST00000597743 PIGBQ92521 554 aa34.9■■■■□ 3.18
CALM3-209ENST00000597743 AK7Q96M32 723 aa34.89■■■■□ 3.18
CALM3-209ENST00000597743 CFAP53Q96M91 514 aa34.89■■■■□ 3.18
CALM3-209ENST00000597743 COL3A1P02461 1466 aaPredicted RBP34.89■■■■□ 3.18
CALM3-209ENST00000597743 TAF1LQ8IZX4 1826 aa34.88■■■■□ 3.17
CALM3-209ENST00000597743 MSL1Q68DK7 614 aa34.88■■■■□ 3.17
CALM3-209ENST00000597743 TOGARAM1Q9Y4F4 1720 aa34.87■■■■□ 3.17
CALM3-209ENST00000597743 NLGN2Q8NFZ4 835 aa34.87■■■■□ 3.17
CALM3-209ENST00000597743 IFNL2Q8IZJ0 200 aa34.86■■■■□ 3.17
CALM3-209ENST00000597743 TMOD3Q9NYL9 352 aa34.86■■■■□ 3.17
CALM3-209ENST00000597743 C4BP0C0L5 1744 aa34.82■■■■□ 3.16
CALM3-209ENST00000597743 GRIN3BO60391 1043 aa34.82■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms