RNA–Protein interactions for RNA: ENST00000597493.5

C19orf48-208, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 971 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-208ENST00000597493 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
C19orf48-208ENST00000597493 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
C19orf48-208ENST00000597493 IGSF1Q8N6C5 1336 aa16.86■□□□□ 0.29
C19orf48-208ENST00000597493 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
C19orf48-208ENST00000597493 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
C19orf48-208ENST00000597493 IL13P35225 146 aa16.85■□□□□ 0.29
C19orf48-208ENST00000597493 NBPF14Q5TI25 921 aa16.85■□□□□ 0.29
C19orf48-208ENST00000597493 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
C19orf48-208ENST00000597493 CYP27B1O15528 508 aa16.84■□□□□ 0.29
C19orf48-208ENST00000597493 MTHFSP49914 203 aa16.84■□□□□ 0.29
C19orf48-208ENST00000597493 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
C19orf48-208ENST00000597493 TXNRD1Q16881 649 aa16.83■□□□□ 0.28
C19orf48-208ENST00000597493 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
C19orf48-208ENST00000597493 ACSBG1Q96GR2 724 aa16.83■□□□□ 0.28
C19orf48-208ENST00000597493 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
C19orf48-208ENST00000597493 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
C19orf48-208ENST00000597493 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
C19orf48-208ENST00000597493 SBF2Q86WG5 1849 aa16.81■□□□□ 0.28
C19orf48-208ENST00000597493 RGPD2P0DJD1 1756 aa16.81■□□□□ 0.28
C19orf48-208ENST00000597493 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
C19orf48-208ENST00000597493 AMOTQ4VCS5 1084 aa16.79■□□□□ 0.28
C19orf48-208ENST00000597493 SLC27A3Q5K4L6 730 aa16.79■□□□□ 0.28
C19orf48-208ENST00000597493 KDRP35968 1356 aa16.78■□□□□ 0.28
C19orf48-208ENST00000597493 ZEB1P37275 1124 aaPredicted RBP16.78■□□□□ 0.28
C19orf48-208ENST00000597493 IFNL2Q8IZJ0 200 aa16.78■□□□□ 0.28
C19orf48-208ENST00000597493 PHKG2P15735 406 aa16.77■□□□□ 0.28
C19orf48-208ENST00000597493 HMGB2P26583 209 aaKnown RBP16.77■□□□□ 0.28
C19orf48-208ENST00000597493 PLEKHO1Q53GL0 409 aaPredicted RBP16.77■□□□□ 0.28
C19orf48-208ENST00000597493 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
C19orf48-208ENST00000597493 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.27
C19orf48-208ENST00000597493 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
C19orf48-208ENST00000597493 PSDA5PKW4 1024 aaPredicted RBP16.76■□□□□ 0.27
C19orf48-208ENST00000597493 DIAPH1O60610 1272 aaKnown RBP16.76■□□□□ 0.27
C19orf48-208ENST00000597493 SULT6B1Q6IMI4 303 aa16.76■□□□□ 0.27
C19orf48-208ENST00000597493 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
C19orf48-208ENST00000597493 HSP90AB1P08238 724 aaKnown RBP16.74■□□□□ 0.27
C19orf48-208ENST00000597493 SLC15A2Q16348 729 aa16.74■□□□□ 0.27
C19orf48-208ENST00000597493 SYTL4Q96C24 671 aaPredicted RBP16.74■□□□□ 0.27
C19orf48-208ENST00000597493 LRRC4BQ9NT99 713 aa16.74■□□□□ 0.27
C19orf48-208ENST00000597493 RREB1Q92766 1687 aa16.73■□□□□ 0.27
C19orf48-208ENST00000597493 ERVV-2B6SEH9 535 aa16.73■□□□□ 0.27
C19orf48-208ENST00000597493 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
C19orf48-208ENST00000597493 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
C19orf48-208ENST00000597493 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
C19orf48-208ENST00000597493 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
C19orf48-208ENST00000597493 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
C19orf48-208ENST00000597493 PIGBQ92521 554 aa16.72■□□□□ 0.27
C19orf48-208ENST00000597493 SMARCC1Q92922 1105 aaPredicted RBP16.72■□□□□ 0.27
C19orf48-208ENST00000597493 SHANK3Q9BYB0 1731 aa16.71■□□□□ 0.27
C19orf48-208ENST00000597493 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
C19orf48-208ENST00000597493 MPRIPQ6WCQ1 1025 aa16.7■□□□□ 0.26
C19orf48-208ENST00000597493 AKT1S1Q96B36 256 aa16.7■□□□□ 0.26
C19orf48-208ENST00000597493 PKD1L3Q7Z443 1732 aa16.7■□□□□ 0.26
C19orf48-208ENST00000597493 CFAP53Q96M91 514 aa16.69■□□□□ 0.26
C19orf48-208ENST00000597493 KAT6BQ8WYB5 2073 aa16.68■□□□□ 0.26
C19orf48-208ENST00000597493 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
C19orf48-208ENST00000597493 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
C19orf48-208ENST00000597493 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
C19orf48-208ENST00000597493 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
C19orf48-208ENST00000597493 CCNL1Q9UK58 526 aaPredicted RBP16.67■□□□□ 0.26
C19orf48-208ENST00000597493 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
C19orf48-208ENST00000597493 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
C19orf48-208ENST00000597493 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
C19orf48-208ENST00000597493 BTAF1O14981 1849 aa16.66■□□□□ 0.26
C19orf48-208ENST00000597493 HMOX1P09601 288 aa16.65■□□□□ 0.26
C19orf48-208ENST00000597493 RALBP1Q15311 655 aa16.65■□□□□ 0.26
C19orf48-208ENST00000597493 SPON1Q9HCB6 807 aa16.65■□□□□ 0.26
C19orf48-208ENST00000597493 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
C19orf48-208ENST00000597493 PALLDQ8WX93 1383 aa16.64■□□□□ 0.26
C19orf48-208ENST00000597493 FCHSD2O94868 740 aa16.64■□□□□ 0.25
C19orf48-208ENST00000597493 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
C19orf48-208ENST00000597493 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
C19orf48-208ENST00000597493 SLC16A10Q8TF71 515 aa16.64■□□□□ 0.25
C19orf48-208ENST00000597493 MTHFSDQ2M296 383 aaKnown RBP16.63■□□□□ 0.25
C19orf48-208ENST00000597493 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
C19orf48-208ENST00000597493 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
C19orf48-208ENST00000597493 LOC102724428A0A0B4J2F2 783 aa16.62■□□□□ 0.25
C19orf48-208ENST00000597493 U2SURPO15042 1029 aaKnown RBP16.62■□□□□ 0.25
C19orf48-208ENST00000597493 KCNQ4P56696 695 aa16.62■□□□□ 0.25
C19orf48-208ENST00000597493 SIK1P57059 783 aa16.62■□□□□ 0.25
C19orf48-208ENST00000597493 CABP4P57796 275 aa16.62■□□□□ 0.25
C19orf48-208ENST00000597493 KDM6AO15550 1401 aaPredicted RBP16.62■□□□□ 0.25
C19orf48-208ENST00000597493 LRP5O75197 1615 aa16.61■□□□□ 0.25
C19orf48-208ENST00000597493 NFATC2IPQ8NCF5 419 aa16.61■□□□□ 0.25
C19orf48-208ENST00000597493 MTFR1LQ9H019 292 aa16.61■□□□□ 0.25
C19orf48-208ENST00000597493 DOT1LQ8TEK3 1739 aa16.61■□□□□ 0.25
C19orf48-208ENST00000597493 PAPPAQ13219 1627 aa16.6■□□□□ 0.25
C19orf48-208ENST00000597493 RNMTO43148 476 aaKnown RBP16.6■□□□□ 0.25
C19orf48-208ENST00000597493 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
C19orf48-208ENST00000597493 SGIP1Q9BQI5 828 aa16.6■□□□□ 0.25
C19orf48-208ENST00000597493 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
C19orf48-208ENST00000597493 TFCP2L1Q9NZI6 479 aa16.6■□□□□ 0.25
C19orf48-208ENST00000597493 PTGER2P43116 358 aa16.59■□□□□ 0.25
C19orf48-208ENST00000597493 FLAD1Q8NFF5 587 aa16.59■□□□□ 0.25
C19orf48-208ENST00000597493 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
C19orf48-208ENST00000597493 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
C19orf48-208ENST00000597493 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
C19orf48-208ENST00000597493 LY75O60449 1722 aa16.58■□□□□ 0.24
C19orf48-208ENST00000597493 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
C19orf48-208ENST00000597493 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms