RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 HSPA5P11021 654 aaKnown RBP23.6■■□□□ 1.37
CCDC9-202ENST00000595659 ZNF827Q17R98 1081 aa23.6■■□□□ 1.37
CCDC9-202ENST00000595659 FLT4P35916 1363 aa23.6■■□□□ 1.37
CCDC9-202ENST00000595659 SMG6Q86US8 1419 aaKnown RBP23.59■■□□□ 1.37
CCDC9-202ENST00000595659 INSRP06213 1382 aa23.59■■□□□ 1.37
CCDC9-202ENST00000595659 TATP17735 454 aaPredicted RBP23.58■■□□□ 1.37
CCDC9-202ENST00000595659 PTGER2P43116 358 aa23.58■■□□□ 1.37
CCDC9-202ENST00000595659 FAM208AQ9UK61 1670 aaKnown RBP23.57■■□□□ 1.36
CCDC9-202ENST00000595659 EIF4G2P78344 907 aaKnown RBP eCLIP23.57■■□□□ 1.36
CCDC9-202ENST00000595659 CGNL1Q0VF96 1302 aa23.56■■□□□ 1.36
CCDC9-202ENST00000595659 CASZ1Q86V15 1759 aa23.55■■□□□ 1.36
CCDC9-202ENST00000595659 TNNT2P45379 298 aaPredicted RBP23.55■■□□□ 1.36
CCDC9-202ENST00000595659 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
CCDC9-202ENST00000595659 MYOM1P52179 1685 aa23.54■■□□□ 1.36
CCDC9-202ENST00000595659 MTFR1LQ9H019 292 aa23.54■■□□□ 1.36
CCDC9-202ENST00000595659 BTAF1O14981 1849 aa23.54■■□□□ 1.36
CCDC9-202ENST00000595659 NSD2O96028 1365 aa23.53■■□□□ 1.36
CCDC9-202ENST00000595659 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
CCDC9-202ENST00000595659 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
CCDC9-202ENST00000595659 AKT1S1Q96B36 256 aa23.52■■□□□ 1.36
CCDC9-202ENST00000595659 PANK3Q9H999 370 aa23.51■■□□□ 1.35
CCDC9-202ENST00000595659 KIF20BQ96Q89 1820 aa23.51■■□□□ 1.35
CCDC9-202ENST00000595659 POLKQ9UBT6 870 aa23.5■■□□□ 1.35
CCDC9-202ENST00000595659 CYP27B1O15528 508 aa23.49■■□□□ 1.35
CCDC9-202ENST00000595659 SGIP1Q9BQI5 828 aa23.49■■□□□ 1.35
CCDC9-202ENST00000595659 FHDC1Q9C0D6 1143 aaPredicted RBP23.49■■□□□ 1.35
CCDC9-202ENST00000595659 CCNL1Q9UK58 526 aaPredicted RBP23.49■■□□□ 1.35
CCDC9-202ENST00000595659 WASHC2AQ641Q2 1341 aa23.49■■□□□ 1.35
CCDC9-202ENST00000595659 PAPPAQ13219 1627 aa23.48■■□□□ 1.35
CCDC9-202ENST00000595659 DCAF8L1A6NGE4 600 aa23.48■■□□□ 1.35
CCDC9-202ENST00000595659 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
CCDC9-202ENST00000595659 PCDH11XQ9BZA7 1347 aa23.48■■□□□ 1.35
CCDC9-202ENST00000595659 PCDH11YQ9BZA8 1340 aa23.48■■□□□ 1.35
CCDC9-202ENST00000595659 EYA1Q99502 592 aa23.47■■□□□ 1.35
CCDC9-202ENST00000595659 MPRIPQ6WCQ1 1025 aa23.46■■□□□ 1.35
CCDC9-202ENST00000595659 KAT6BQ8WYB5 2073 aa23.46■■□□□ 1.35
CCDC9-202ENST00000595659 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
CCDC9-202ENST00000595659 DOT1LQ8TEK3 1739 aa23.45■■□□□ 1.34
CCDC9-202ENST00000595659 PNPLA7Q6ZV29 1317 aa23.45■■□□□ 1.34
CCDC9-202ENST00000595659 ARXQ96QS3 562 aa23.45■■□□□ 1.34
CCDC9-202ENST00000595659 SYT17Q9BSW7 474 aa23.45■■□□□ 1.34
CCDC9-202ENST00000595659 YY1P25490 414 aa23.44■■□□□ 1.34
CCDC9-202ENST00000595659 EIF4A2Q14240 407 aaKnown RBP23.43■■□□□ 1.34
CCDC9-202ENST00000595659 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
CCDC9-202ENST00000595659 MSH5O43196 834 aa23.41■■□□□ 1.34
CCDC9-202ENST00000595659 KLHL34Q8N239 644 aa23.4■■□□□ 1.34
CCDC9-202ENST00000595659 SLC16A10Q8TF71 515 aa23.39■■□□□ 1.33
CCDC9-202ENST00000595659 PIGBQ92521 554 aa23.38■■□□□ 1.33
CCDC9-202ENST00000595659 NCAPD2Q15021 1401 aa23.38■■□□□ 1.33
CCDC9-202ENST00000595659 PALLDQ8WX93 1383 aa23.38■■□□□ 1.33
CCDC9-202ENST00000595659 NKX1-1Q15270 411 aaPredicted RBP23.37■■□□□ 1.33
CCDC9-202ENST00000595659 MORC1Q86VD1 984 aa23.37■■□□□ 1.33
CCDC9-202ENST00000595659 COL23A1Q86Y22 540 aaPredicted RBP23.37■■□□□ 1.33
CCDC9-202ENST00000595659 POLD1P28340 1107 aa23.36■■□□□ 1.33
CCDC9-202ENST00000595659 PHKG2P15735 406 aa23.34■■□□□ 1.33
CCDC9-202ENST00000595659 MSL1Q68DK7 614 aa23.34■■□□□ 1.33
CCDC9-202ENST00000595659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.34■■□□□ 1.33
CCDC9-202ENST00000595659 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
CCDC9-202ENST00000595659 IFNL2Q8IZJ0 200 aa23.33■■□□□ 1.33
CCDC9-202ENST00000595659 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
CCDC9-202ENST00000595659 SMIM5Q71RC9 77 aa23.32■■□□□ 1.32
CCDC9-202ENST00000595659 TMOD3Q9NYL9 352 aa23.32■■□□□ 1.32
CCDC9-202ENST00000595659 LY75O60449 1722 aa23.32■■□□□ 1.32
CCDC9-202ENST00000595659 ANKRD26Q9UPS8 1709 aa23.31■■□□□ 1.32
CCDC9-202ENST00000595659 KIF7Q2M1P5 1343 aa23.31■■□□□ 1.32
CCDC9-202ENST00000595659 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
CCDC9-202ENST00000595659 ASAP1Q9ULH1 1129 aa23.3■■□□□ 1.32
CCDC9-202ENST00000595659 MAP2P11137 1827 aaKnown RBP23.3■■□□□ 1.32
CCDC9-202ENST00000595659 AEBP1Q8IUX7 1158 aa23.29■■□□□ 1.32
CCDC9-202ENST00000595659 TOGARAM1Q9Y4F4 1720 aa23.28■■□□□ 1.32
CCDC9-202ENST00000595659 AMIGO3Q86WK7 504 aa23.28■■□□□ 1.32
CCDC9-202ENST00000595659 PKD1L3Q7Z443 1732 aa23.28■■□□□ 1.32
CCDC9-202ENST00000595659 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
CCDC9-202ENST00000595659 PHF14O94880 888 aa23.27■■□□□ 1.32
CCDC9-202ENST00000595659 SIK1P57059 783 aa23.27■■□□□ 1.32
CCDC9-202ENST00000595659 NLGN2Q8NFZ4 835 aa23.27■■□□□ 1.32
CCDC9-202ENST00000595659 AK7Q96M32 723 aa23.27■■□□□ 1.32
CCDC9-202ENST00000595659 MAP3K5Q99683 1374 aa23.27■■□□□ 1.31
CCDC9-202ENST00000595659 GPR162Q16538 588 aa23.26■■□□□ 1.31
CCDC9-202ENST00000595659 AMER1Q5JTC6 1135 aaPredicted RBP23.26■■□□□ 1.31
CCDC9-202ENST00000595659 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
CCDC9-202ENST00000595659 ATG3Q9NT62 314 aa23.26■■□□□ 1.31
CCDC9-202ENST00000595659 PLEKHO1Q53GL0 409 aaPredicted RBP23.25■■□□□ 1.31
CCDC9-202ENST00000595659 LINC00116Q8NCU8 138 aa23.25■■□□□ 1.31
CCDC9-202ENST00000595659 ITPK1Q13572 414 aa23.24■■□□□ 1.31
CCDC9-202ENST00000595659 ZNF530Q6P9A1 599 aaPredicted RBP23.24■■□□□ 1.31
CCDC9-202ENST00000595659 TUBGCP6Q96RT7 1819 aa23.24■■□□□ 1.31
CCDC9-202ENST00000595659 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
CCDC9-202ENST00000595659 CNGB1Q14028 1251 aaPredicted RBP23.23■■□□□ 1.31
CCDC9-202ENST00000595659 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
CCDC9-202ENST00000595659 FLAD1Q8NFF5 587 aa23.23■■□□□ 1.31
CCDC9-202ENST00000595659 HMGB2P26583 209 aaKnown RBP23.22■■□□□ 1.31
CCDC9-202ENST00000595659 QSER1Q2KHR3 1735 aa23.22■■□□□ 1.31
CCDC9-202ENST00000595659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.21■■□□□ 1.31
CCDC9-202ENST00000595659 IL13P35225 146 aa23.21■■□□□ 1.31
CCDC9-202ENST00000595659 CC2D1BQ5T0F9 858 aaKnown RBP23.21■■□□□ 1.31
CCDC9-202ENST00000595659 DCAF5Q96JK2 942 aa23.2■■□□□ 1.3
CCDC9-202ENST00000595659 C5P01031 1676 aa23.19■■□□□ 1.3
CCDC9-202ENST00000595659 ERVV-2B6SEH9 535 aa23.19■■□□□ 1.3
CCDC9-202ENST00000595659 HSP90AB1P08238 724 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms