RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 SHANK3Q9BYB0 1731 aa18.53■□□□□ 0.56
TMEM38A-202ENST00000595452 PCDH11XQ9BZA7 1347 aa18.52■□□□□ 0.56
TMEM38A-202ENST00000595452 PCDH11YQ9BZA8 1340 aa18.52■□□□□ 0.56
TMEM38A-202ENST00000595452 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.56
TMEM38A-202ENST00000595452 PLEKHG2Q9H7P9 1386 aa18.52■□□□□ 0.55
TMEM38A-202ENST00000595452 DOT1LQ8TEK3 1739 aa18.52■□□□□ 0.55
TMEM38A-202ENST00000595452 NCAPD2Q15021 1401 aa18.51■□□□□ 0.55
TMEM38A-202ENST00000595452 PER1O15534 1290 aaPredicted RBP18.51■□□□□ 0.55
TMEM38A-202ENST00000595452 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
TMEM38A-202ENST00000595452 NUP188Q5SRE5 1749 aa18.5■□□□□ 0.55
TMEM38A-202ENST00000595452 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
TMEM38A-202ENST00000595452 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
TMEM38A-202ENST00000595452 BTAF1O14981 1849 aa18.49■□□□□ 0.55
TMEM38A-202ENST00000595452 PLSCR1O15162 318 aa18.49■□□□□ 0.55
TMEM38A-202ENST00000595452 NBPF14Q5TI25 921 aa18.49■□□□□ 0.55
TMEM38A-202ENST00000595452 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
TMEM38A-202ENST00000595452 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
TMEM38A-202ENST00000595452 EYA1Q99502 592 aa18.48■□□□□ 0.55
TMEM38A-202ENST00000595452 ACSBG1Q96GR2 724 aa18.47■□□□□ 0.55
TMEM38A-202ENST00000595452 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
TMEM38A-202ENST00000595452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
TMEM38A-202ENST00000595452 CNGB1Q14028 1251 aaPredicted RBP18.45■□□□□ 0.54
TMEM38A-202ENST00000595452 SYTL4Q96C24 671 aaPredicted RBP18.45■□□□□ 0.54
TMEM38A-202ENST00000595452 MTHFSP49914 203 aa18.44■□□□□ 0.54
TMEM38A-202ENST00000595452 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
TMEM38A-202ENST00000595452 KCNQ2O43526 872 aa18.42■□□□□ 0.54
TMEM38A-202ENST00000595452 HMGB2P26583 209 aaKnown RBP18.41■□□□□ 0.54
TMEM38A-202ENST00000595452 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
TMEM38A-202ENST00000595452 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
TMEM38A-202ENST00000595452 PLEKHO1Q53GL0 409 aaPredicted RBP18.4■□□□□ 0.54
TMEM38A-202ENST00000595452 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
TMEM38A-202ENST00000595452 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 PTF1AQ7RTS3 328 aa18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 ITGB4P16144 1822 aa18.39■□□□□ 0.53
TMEM38A-202ENST00000595452 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
TMEM38A-202ENST00000595452 IL13P35225 146 aa18.38■□□□□ 0.53
TMEM38A-202ENST00000595452 SULT6B1Q6IMI4 303 aa18.38■□□□□ 0.53
TMEM38A-202ENST00000595452 KDRP35968 1356 aa18.38■□□□□ 0.53
TMEM38A-202ENST00000595452 CYP27B1O15528 508 aa18.37■□□□□ 0.53
TMEM38A-202ENST00000595452 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
TMEM38A-202ENST00000595452 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
TMEM38A-202ENST00000595452 LY75O60449 1722 aa18.36■□□□□ 0.53
TMEM38A-202ENST00000595452 STK32BQ9NY57 414 aa18.36■□□□□ 0.53
TMEM38A-202ENST00000595452 TOGARAM1Q9Y4F4 1720 aa18.36■□□□□ 0.53
TMEM38A-202ENST00000595452 LRP5O75197 1615 aa18.35■□□□□ 0.53
TMEM38A-202ENST00000595452 PHKG2P15735 406 aa18.35■□□□□ 0.53
TMEM38A-202ENST00000595452 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
TMEM38A-202ENST00000595452 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
TMEM38A-202ENST00000595452 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
TMEM38A-202ENST00000595452 SRCAPQ6ZRS2 3230 aa18.33■□□□□ 0.53
TMEM38A-202ENST00000595452 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
TMEM38A-202ENST00000595452 MPRIPQ6WCQ1 1025 aa18.33■□□□□ 0.52
TMEM38A-202ENST00000595452 SMARCC1Q92922 1105 aaPredicted RBP18.33■□□□□ 0.52
TMEM38A-202ENST00000595452 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
TMEM38A-202ENST00000595452 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
TMEM38A-202ENST00000595452 AEBP1Q8IUX7 1158 aa18.32■□□□□ 0.52
TMEM38A-202ENST00000595452 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
TMEM38A-202ENST00000595452 PPP2R1AP30153 589 aa18.31■□□□□ 0.52
TMEM38A-202ENST00000595452 PAPPAQ13219 1627 aa18.31■□□□□ 0.52
TMEM38A-202ENST00000595452 HMOX1P09601 288 aa18.3■□□□□ 0.52
TMEM38A-202ENST00000595452 PROM2Q8N271 834 aa18.3■□□□□ 0.52
TMEM38A-202ENST00000595452 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
TMEM38A-202ENST00000595452 DDX10Q13206 875 aaKnown RBP18.29■□□□□ 0.52
TMEM38A-202ENST00000595452 CCNL1Q9UK58 526 aaPredicted RBP18.29■□□□□ 0.52
TMEM38A-202ENST00000595452 QSER1Q2KHR3 1735 aa18.29■□□□□ 0.52
TMEM38A-202ENST00000595452 C5P01031 1676 aa18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 SCN11AQ9UI33 1791 aa18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 ERVV-2B6SEH9 535 aa18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 VIRMAQ69YN4 1812 aaKnown RBP18.28■□□□□ 0.52
TMEM38A-202ENST00000595452 RALBP1Q15311 655 aa18.27■□□□□ 0.52
TMEM38A-202ENST00000595452 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
TMEM38A-202ENST00000595452 NEFMP07197 916 aa18.26■□□□□ 0.51
TMEM38A-202ENST00000595452 CASZ1Q86V15 1759 aa18.26■□□□□ 0.51
TMEM38A-202ENST00000595452 TAF1LQ8IZX4 1826 aa18.26■□□□□ 0.51
TMEM38A-202ENST00000595452 CABP4P57796 275 aa18.25■□□□□ 0.51
TMEM38A-202ENST00000595452 GAS2L2Q8NHY3 880 aa18.25■□□□□ 0.51
TMEM38A-202ENST00000595452 PIGBQ92521 554 aa18.25■□□□□ 0.51
TMEM38A-202ENST00000595452 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
TMEM38A-202ENST00000595452 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
TMEM38A-202ENST00000595452 SPON1Q9HCB6 807 aa18.24■□□□□ 0.51
TMEM38A-202ENST00000595452 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
TMEM38A-202ENST00000595452 LRRC4BQ9NT99 713 aa18.23■□□□□ 0.51
TMEM38A-202ENST00000595452 TFCP2L1Q9NZI6 479 aa18.22■□□□□ 0.51
TMEM38A-202ENST00000595452 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
TMEM38A-202ENST00000595452 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
TMEM38A-202ENST00000595452 ZNF831Q5JPB2 1677 aa18.21■□□□□ 0.51
TMEM38A-202ENST00000595452 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
TMEM38A-202ENST00000595452 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
TMEM38A-202ENST00000595452 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
TMEM38A-202ENST00000595452 MAP3K5Q99683 1374 aa18.19■□□□□ 0.5
TMEM38A-202ENST00000595452 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
TMEM38A-202ENST00000595452 FCHSD2O94868 740 aa18.19■□□□□ 0.5
TMEM38A-202ENST00000595452 PRKAR2BP31323 418 aa18.19■□□□□ 0.5
TMEM38A-202ENST00000595452 SIK1P57059 783 aa18.19■□□□□ 0.5
TMEM38A-202ENST00000595452 MTHFSDQ2M296 383 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 570 ms