RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PKD1L3Q7Z443 1732 aa29.7■■■□□ 2.34
HOMER3-206ENST00000594439 IL13P35225 146 aa29.69■■■□□ 2.34
HOMER3-206ENST00000594439 APBA3O96018 575 aa29.68■■■□□ 2.34
HOMER3-206ENST00000594439 EN1Q05925 392 aaPredicted RBP29.68■■■□□ 2.34
HOMER3-206ENST00000594439 PTF1AQ7RTS3 328 aa29.68■■■□□ 2.34
HOMER3-206ENST00000594439 NHSQ6T4R5 1651 aa29.68■■■□□ 2.34
HOMER3-206ENST00000594439 DDX10Q13206 875 aaKnown RBP29.67■■■□□ 2.34
HOMER3-206ENST00000594439 BCL11BQ9C0K0 894 aaPredicted RBP29.67■■■□□ 2.34
HOMER3-206ENST00000594439 COL3A1P02461 1466 aaPredicted RBP29.64■■■□□ 2.34
HOMER3-206ENST00000594439 CAMKK2Q96RR4 588 aa29.64■■■□□ 2.34
HOMER3-206ENST00000594439 KCNQ2O43526 872 aa29.63■■■□□ 2.33
HOMER3-206ENST00000594439 ACSBG1Q96GR2 724 aa29.63■■■□□ 2.33
HOMER3-206ENST00000594439 KAT6BQ8WYB5 2073 aa29.62■■■□□ 2.33
HOMER3-206ENST00000594439 PCDH11XQ9BZA7 1347 aa29.62■■■□□ 2.33
HOMER3-206ENST00000594439 PCDH11YQ9BZA8 1340 aa29.62■■■□□ 2.33
HOMER3-206ENST00000594439 PPP2R1AP30153 589 aa29.61■■■□□ 2.33
HOMER3-206ENST00000594439 EZH2Q15910 746 aaKnown RBP29.61■■■□□ 2.33
HOMER3-206ENST00000594439 DOT1LQ8TEK3 1739 aa29.61■■■□□ 2.33
HOMER3-206ENST00000594439 PLEKHG2Q9H7P9 1386 aa29.61■■■□□ 2.33
HOMER3-206ENST00000594439 RGPD3A6NKT7 1758 aaPredicted RBP29.6■■■□□ 2.33
HOMER3-206ENST00000594439 RGPD4Q7Z3J3 1758 aa29.6■■■□□ 2.33
HOMER3-206ENST00000594439 AEBP1Q8IUX7 1158 aa29.6■■■□□ 2.33
HOMER3-206ENST00000594439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.6■■■□□ 2.33
HOMER3-206ENST00000594439 PARD3Q8TEW0 1356 aa29.6■■■□□ 2.33
HOMER3-206ENST00000594439 RREB1Q92766 1687 aa29.6■■■□□ 2.33
HOMER3-206ENST00000594439 CYP27B1O15528 508 aa29.59■■■□□ 2.33
HOMER3-206ENST00000594439 DIAPH1O60610 1272 aaKnown RBP29.59■■■□□ 2.33
HOMER3-206ENST00000594439 KDRP35968 1356 aa29.59■■■□□ 2.33
HOMER3-206ENST00000594439 SPG7Q9UQ90 795 aa29.58■■■□□ 2.33
HOMER3-206ENST00000594439 BTAF1O14981 1849 aa29.57■■■□□ 2.32
HOMER3-206ENST00000594439 SULT6B1Q6IMI4 303 aa29.57■■■□□ 2.32
HOMER3-206ENST00000594439 PLSCR1O15162 318 aa29.56■■■□□ 2.32
HOMER3-206ENST00000594439 NUP188Q5SRE5 1749 aa29.54■■■□□ 2.32
HOMER3-206ENST00000594439 TOGARAM1Q9Y4F4 1720 aa29.52■■■□□ 2.32
HOMER3-206ENST00000594439 CFAP53Q96M91 514 aa29.52■■■□□ 2.32
HOMER3-206ENST00000594439 PRIM1P49642 420 aaKnown RBP29.51■■■□□ 2.31
HOMER3-206ENST00000594439 NKX1-1Q15270 411 aaPredicted RBP29.51■■■□□ 2.31
HOMER3-206ENST00000594439 PLEKHO1Q53GL0 409 aaPredicted RBP29.5■■■□□ 2.31
HOMER3-206ENST00000594439 ZNF316A6NFI3 1004 aaPredicted RBP29.49■■■□□ 2.31
HOMER3-206ENST00000594439 HMOX1P09601 288 aa29.49■■■□□ 2.31
HOMER3-206ENST00000594439 PHKG2P15735 406 aa29.49■■■□□ 2.31
HOMER3-206ENST00000594439 AMOTQ4VCS5 1084 aa29.48■■■□□ 2.31
HOMER3-206ENST00000594439 IFNL2Q8IZJ0 200 aa29.48■■■□□ 2.31
HOMER3-206ENST00000594439 SYTL4Q96C24 671 aaPredicted RBP29.48■■■□□ 2.31
HOMER3-206ENST00000594439 ITGB4P16144 1822 aa29.48■■■□□ 2.31
HOMER3-206ENST00000594439 RALBP1Q15311 655 aa29.47■■■□□ 2.31
HOMER3-206ENST00000594439 PROM2Q8N271 834 aa29.47■■■□□ 2.31
HOMER3-206ENST00000594439 U2SURPO15042 1029 aaKnown RBP29.46■■■□□ 2.31
HOMER3-206ENST00000594439 ZNF530Q6P9A1 599 aaPredicted RBP29.44■■■□□ 2.3
HOMER3-206ENST00000594439 TXNRD1Q16881 649 aa29.43■■■□□ 2.3
HOMER3-206ENST00000594439 NUDCQ9Y266 331 aa29.4■■■□□ 2.3
HOMER3-206ENST00000594439 LY75O60449 1722 aa29.39■■■□□ 2.3
HOMER3-206ENST00000594439 MPRIPQ6WCQ1 1025 aa29.38■■■□□ 2.29
HOMER3-206ENST00000594439 HSP90AB1P08238 724 aaKnown RBP29.37■■■□□ 2.29
HOMER3-206ENST00000594439 KDM6AO15550 1401 aaPredicted RBP29.37■■■□□ 2.29
HOMER3-206ENST00000594439 PSDA5PKW4 1024 aaPredicted RBP29.36■■■□□ 2.29
HOMER3-206ENST00000594439 C1orf141Q5JVX7 400 aa29.36■■■□□ 2.29
HOMER3-206ENST00000594439 DCAF5Q96JK2 942 aa29.36■■■□□ 2.29
HOMER3-206ENST00000594439 R3HDM1Q15032 1099 aaKnown RBP29.35■■■□□ 2.29
HOMER3-206ENST00000594439 NBPF14Q5TI25 921 aa29.35■■■□□ 2.29
HOMER3-206ENST00000594439 PIGBQ92521 554 aa29.35■■■□□ 2.29
HOMER3-206ENST00000594439 MYBBP1AQ9BQG0 1328 aaKnown RBP29.35■■■□□ 2.29
HOMER3-206ENST00000594439 U2AF1L5P0DN76 240 aaPredicted RBP29.34■■■□□ 2.29
HOMER3-206ENST00000594439 U2AF1Q01081 240 aaKnown RBP eCLIP29.34■■■□□ 2.29
HOMER3-206ENST00000594439 MTHFSDQ2M296 383 aaKnown RBP29.34■■■□□ 2.29
HOMER3-206ENST00000594439 RSPH6AQ9H0K4 717 aa29.34■■■□□ 2.29
HOMER3-206ENST00000594439 AKAP4Q5JQC9 854 aa29.33■■■□□ 2.29
HOMER3-206ENST00000594439 PRKRIP1Q9H875 184 aaPredicted RBP29.33■■■□□ 2.29
HOMER3-206ENST00000594439 ANO8Q9HCE9 1232 aaPredicted RBP29.33■■■□□ 2.29
HOMER3-206ENST00000594439 PAPPAQ13219 1627 aa29.33■■■□□ 2.29
HOMER3-206ENST00000594439 SCN11AQ9UI33 1791 aa29.33■■■□□ 2.29
HOMER3-206ENST00000594439 ERVV-2B6SEH9 535 aa29.32■■■□□ 2.28
HOMER3-206ENST00000594439 LRRC4BQ9NT99 713 aa29.32■■■□□ 2.28
HOMER3-206ENST00000594439 TMOD3Q9NYL9 352 aa29.32■■■□□ 2.28
HOMER3-206ENST00000594439 PRKAR2BP31323 418 aa29.31■■■□□ 2.28
HOMER3-206ENST00000594439 SLC27A3Q5K4L6 730 aa29.31■■■□□ 2.28
HOMER3-206ENST00000594439 VIRMAQ69YN4 1812 aaKnown RBP29.3■■■□□ 2.28
HOMER3-206ENST00000594439 PALLDQ8WX93 1383 aa29.28■■■□□ 2.28
HOMER3-206ENST00000594439 FCHSD2O94868 740 aa29.28■■■□□ 2.28
HOMER3-206ENST00000594439 PHACTR3Q96KR7 559 aa29.28■■■□□ 2.28
HOMER3-206ENST00000594439 ADAMTS7Q9UKP4 1686 aa29.28■■■□□ 2.28
HOMER3-206ENST00000594439 SMARCC1Q92922 1105 aaPredicted RBP29.27■■■□□ 2.28
HOMER3-206ENST00000594439 KCNQ4P56696 695 aa29.25■■■□□ 2.27
HOMER3-206ENST00000594439 GAS2L2Q8NHY3 880 aa29.25■■■□□ 2.27
HOMER3-206ENST00000594439 CCNL1Q9UK58 526 aaPredicted RBP29.25■■■□□ 2.27
HOMER3-206ENST00000594439 CABP4P57796 275 aa29.24■■■□□ 2.27
HOMER3-206ENST00000594439 LGR6Q9HBX8 967 aa29.24■■■□□ 2.27
HOMER3-206ENST00000594439 STK32BQ9NY57 414 aa29.24■■■□□ 2.27
HOMER3-206ENST00000594439 ASAP1Q9ULH1 1129 aa29.24■■■□□ 2.27
HOMER3-206ENST00000594439 RNMTO43148 476 aaKnown RBP29.23■■■□□ 2.27
HOMER3-206ENST00000594439 SLC15A2Q16348 729 aa29.23■■■□□ 2.27
HOMER3-206ENST00000594439 ATG3Q9NT62 314 aa29.22■■■□□ 2.27
HOMER3-206ENST00000594439 MRC1P22897 1456 aa29.22■■■□□ 2.27
HOMER3-206ENST00000594439 TAF1LQ8IZX4 1826 aa29.21■■■□□ 2.27
HOMER3-206ENST00000594439 MAP3K5Q99683 1374 aa29.21■■■□□ 2.27
HOMER3-206ENST00000594439 ZNF827Q17R98 1081 aa29.2■■■□□ 2.26
HOMER3-206ENST00000594439 NFATC2IPQ8NCF5 419 aa29.2■■■□□ 2.26
HOMER3-206ENST00000594439 C5P01031 1676 aa29.2■■■□□ 2.26
HOMER3-206ENST00000594439 AKT1S1Q96B36 256 aa29.19■■■□□ 2.26
HOMER3-206ENST00000594439 CASZ1Q86V15 1759 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms