RNA–Protein interactions for RNA: ENST00000593990.1

FARP1-209, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-209ENST00000593990 PDZRN3Q9UPQ7 1066 aa11.41□□□□□ -0.58
FARP1-209ENST00000593990 A2MP01023 1474 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 SOCS7O14512 581 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 SLC19A1P41440 591 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 CTDSPL2Q05D32 466 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 RETREG3Q86VR2 466 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 SCUBE3Q8IX30 993 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
FARP1-209ENST00000593990 TSC1Q92574 1164 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 POM121Q96HA1 1249 aa11.4□□□□□ -0.58
FARP1-209ENST00000593990 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
FARP1-209ENST00000593990 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
FARP1-209ENST00000593990 ADH1BP00325 375 aa11.39□□□□□ -0.59
FARP1-209ENST00000593990 RNF19BQ6ZMZ0 732 aa11.39□□□□□ -0.59
FARP1-209ENST00000593990 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
FARP1-209ENST00000593990 RAD21O60216 631 aa11.38□□□□□ -0.59
FARP1-209ENST00000593990 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
FARP1-209ENST00000593990 TLL1O43897 1013 aa11.37□□□□□ -0.59
FARP1-209ENST00000593990 BRICD5Q6PL45 260 aa11.37□□□□□ -0.59
FARP1-209ENST00000593990 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
FARP1-209ENST00000593990 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
FARP1-209ENST00000593990 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
FARP1-209ENST00000593990 MROH1Q8NDA8 1641 aa11.36□□□□□ -0.59
FARP1-209ENST00000593990 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
FARP1-209ENST00000593990 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
FARP1-209ENST00000593990 CFAP65Q6ZU64 1925 aaKnown RBP11.36□□□□□ -0.59
FARP1-209ENST00000593990 ARHGEF5Q12774 1597 aa11.36□□□□□ -0.59
FARP1-209ENST00000593990 CROCC2H7BZ55 1655 aa11.36□□□□□ -0.59
FARP1-209ENST00000593990 CEP152O94986 1710 aa11.35□□□□□ -0.59
FARP1-209ENST00000593990 APBB1O00213 710 aa11.35□□□□□ -0.59
FARP1-209ENST00000593990 S1PR4O95977 384 aa11.35□□□□□ -0.59
FARP1-209ENST00000593990 SLC6A16Q9GZN6 736 aa11.35□□□□□ -0.59
FARP1-209ENST00000593990 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
FARP1-209ENST00000593990 TRAK2O60296 914 aa11.34□□□□□ -0.59
FARP1-209ENST00000593990 FMNL1O95466 1100 aaPredicted RBP11.34□□□□□ -0.59
FARP1-209ENST00000593990 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
FARP1-209ENST00000593990 HMX1Q9NP08 348 aaPredicted RBP11.34□□□□□ -0.59
FARP1-209ENST00000593990 UHRF1BP1Q6BDS2 1440 aa11.34□□□□□ -0.59
FARP1-209ENST00000593990 ZMYM3Q14202 1370 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 ZNF598Q86UK7 904 aaKnown RBP11.33□□□□□ -0.6
FARP1-209ENST00000593990 LRRN4Q8WUT4 740 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 GJD4Q96KN9 370 aaPredicted RBP11.33□□□□□ -0.6
FARP1-209ENST00000593990 GDPD2Q9HCC8 539 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 CAMSAP1Q5T5Y3 1602 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 MAST1Q9Y2H9 1570 aa11.33□□□□□ -0.6
FARP1-209ENST00000593990 MAP3K1Q13233 1512 aa11.32□□□□□ -0.6
FARP1-209ENST00000593990 GGT6Q6P531 493 aa11.32□□□□□ -0.6
FARP1-209ENST00000593990 FNBP4Q8N3X1 1017 aaPredicted RBP11.32□□□□□ -0.6
FARP1-209ENST00000593990 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
FARP1-209ENST00000593990 SPSB2Q99619 263 aa11.31□□□□□ -0.6
FARP1-209ENST00000593990 RTEL1-TNFRSF6BF6WH68 1400 aa11.31□□□□□ -0.6
FARP1-209ENST00000593990 CEP170BQ9Y4F5 1589 aaPredicted RBP11.31□□□□□ -0.6
FARP1-209ENST00000593990 RNF17Q9BXT8 1623 aaKnown RBP11.31□□□□□ -0.6
FARP1-209ENST00000593990 PTPN23Q9H3S7 1636 aa11.31□□□□□ -0.6
FARP1-209ENST00000593990 TRIM34Q9BYJ4 488 aa11.3□□□□□ -0.6
FARP1-209ENST00000593990 PRM3Q9NNZ6 103 aa11.3□□□□□ -0.6
FARP1-209ENST00000593990 TBC1D2BQ9UPU7 963 aa11.3□□□□□ -0.6
FARP1-209ENST00000593990 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
FARP1-209ENST00000593990 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
FARP1-209ENST00000593990 DHX29Q7Z478 1369 aaKnown RBP11.29□□□□□ -0.6
FARP1-209ENST00000593990 NCOA1Q15788 1441 aa11.29□□□□□ -0.6
FARP1-209ENST00000593990 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
FARP1-209ENST00000593990 CNTLNQ9NXG0 1405 aa11.29□□□□□ -0.6
FARP1-209ENST00000593990 LCE2BO14633 110 aa11.29□□□□□ -0.6
FARP1-209ENST00000593990 PPEF1O14829 653 aaPredicted RBP11.29□□□□□ -0.6
FARP1-209ENST00000593990 PRR20EP86478 221 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 PRR20CP86479 221 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 PRR20DP86480 221 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 PRR20BP86481 221 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 PRR20AP86496 221 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 LYPD8Q6UX82 237 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
FARP1-209ENST00000593990 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
FARP1-209ENST00000593990 NPATQ14207 1427 aa11.27□□□□□ -0.6
FARP1-209ENST00000593990 KDM5DQ9BY66 1539 aa11.27□□□□□ -0.61
FARP1-209ENST00000593990 ABL2P42684 1182 aa11.27□□□□□ -0.61
FARP1-209ENST00000593990 FBXO41Q8TF61 875 aa11.27□□□□□ -0.61
FARP1-209ENST00000593990 EMID1Q96A84 441 aaPredicted RBP11.27□□□□□ -0.61
FARP1-209ENST00000593990 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
FARP1-209ENST00000593990 KIF3BO15066 747 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 MSS51Q4VC12 460 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 ZNF697Q5TEC3 545 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 FAM160A2Q8N612 972 aaPredicted RBP11.26□□□□□ -0.61
FARP1-209ENST00000593990 EPS8L1Q8TE68 723 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 ABCC5O15440 1437 aa11.26□□□□□ -0.61
FARP1-209ENST00000593990 ABCC3O15438 1527 aa11.25□□□□□ -0.61
FARP1-209ENST00000593990 EIF2AK4Q9P2K8 1649 aaKnown RBP11.25□□□□□ -0.61
FARP1-209ENST00000593990 JUNDP17535 347 aa11.25□□□□□ -0.61
FARP1-209ENST00000593990 TRIM67Q6ZTA4 783 aa11.25□□□□□ -0.61
FARP1-209ENST00000593990 STRCP1A6NGW2 1772 aa11.25□□□□□ -0.61
FARP1-209ENST00000593990 DGAT1O75907 488 aa11.24□□□□□ -0.61
FARP1-209ENST00000593990 NR6A1Q15406 480 aa11.24□□□□□ -0.61
FARP1-209ENST00000593990 PKDCCQ504Y2 493 aa11.24□□□□□ -0.61
FARP1-209ENST00000593990 TCOF1Q13428 1488 aaKnown RBP11.24□□□□□ -0.61
FARP1-209ENST00000593990 GPR37L1O60883 481 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms