RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SF3B2Q13435 895 aaKnown RBP20.73■□□□□ 0.91
TRIM47-206ENST00000592942 KCNQ2O43526 872 aa20.72■□□□□ 0.91
TRIM47-206ENST00000592942 EN1Q05925 392 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-206ENST00000592942 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
TRIM47-206ENST00000592942 BCL11BQ9C0K0 894 aaPredicted RBP20.72■□□□□ 0.91
TRIM47-206ENST00000592942 SHANK3Q9BYB0 1731 aa20.72■□□□□ 0.91
TRIM47-206ENST00000592942 TNS1Q9HBL0 1735 aaKnown RBP20.71■□□□□ 0.91
TRIM47-206ENST00000592942 PARD3Q8TEW0 1356 aa20.71■□□□□ 0.91
TRIM47-206ENST00000592942 RGPD1P0DJD0 1748 aa20.7■□□□□ 0.9
TRIM47-206ENST00000592942 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-206ENST00000592942 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
TRIM47-206ENST00000592942 CYP27B1O15528 508 aa20.7■□□□□ 0.9
TRIM47-206ENST00000592942 DIAPH1O60610 1272 aaKnown RBP20.7■□□□□ 0.9
TRIM47-206ENST00000592942 APBA3O96018 575 aa20.7■□□□□ 0.9
TRIM47-206ENST00000592942 BAG6P46379 1132 aa20.7■□□□□ 0.9
TRIM47-206ENST00000592942 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
TRIM47-206ENST00000592942 SULT6B1Q6IMI4 303 aa20.69■□□□□ 0.9
TRIM47-206ENST00000592942 ACSBG1Q96GR2 724 aa20.69■□□□□ 0.9
TRIM47-206ENST00000592942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.69■□□□□ 0.9
TRIM47-206ENST00000592942 KDRP35968 1356 aa20.68■□□□□ 0.9
TRIM47-206ENST00000592942 EZH2Q15910 746 aaKnown RBP20.67■□□□□ 0.9
TRIM47-206ENST00000592942 PCDH11XQ9BZA7 1347 aa20.65■□□□□ 0.9
TRIM47-206ENST00000592942 PCDH11YQ9BZA8 1340 aa20.65■□□□□ 0.9
TRIM47-206ENST00000592942 PLSCR1O15162 318 aa20.65■□□□□ 0.9
TRIM47-206ENST00000592942 NKX1-1Q15270 411 aaPredicted RBP20.65■□□□□ 0.9
TRIM47-206ENST00000592942 SPG7Q9UQ90 795 aa20.65■□□□□ 0.9
TRIM47-206ENST00000592942 PKD1L3Q7Z443 1732 aa20.64■□□□□ 0.9
TRIM47-206ENST00000592942 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.89
TRIM47-206ENST00000592942 PROM2Q8N271 834 aa20.64■□□□□ 0.89
TRIM47-206ENST00000592942 PLEKHG2Q9H7P9 1386 aa20.63■□□□□ 0.89
TRIM47-206ENST00000592942 HMOX1P09601 288 aa20.63■□□□□ 0.89
TRIM47-206ENST00000592942 RALBP1Q15311 655 aa20.63■□□□□ 0.89
TRIM47-206ENST00000592942 PHKG2P15735 406 aa20.62■□□□□ 0.89
TRIM47-206ENST00000592942 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
TRIM47-206ENST00000592942 PLEKHO1Q53GL0 409 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-206ENST00000592942 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
TRIM47-206ENST00000592942 NHSQ6T4R5 1651 aa20.61■□□□□ 0.89
TRIM47-206ENST00000592942 AMOTQ4VCS5 1084 aa20.6■□□□□ 0.89
TRIM47-206ENST00000592942 IFNL2Q8IZJ0 200 aa20.6■□□□□ 0.89
TRIM47-206ENST00000592942 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
TRIM47-206ENST00000592942 PRKRIP1Q9H875 184 aaPredicted RBP20.57■□□□□ 0.88
TRIM47-206ENST00000592942 SYTL4Q96C24 671 aaPredicted RBP20.56■□□□□ 0.88
TRIM47-206ENST00000592942 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
TRIM47-206ENST00000592942 ZNF530Q6P9A1 599 aaPredicted RBP20.55■□□□□ 0.88
TRIM47-206ENST00000592942 RSPH6AQ9H0K4 717 aa20.55■□□□□ 0.88
TRIM47-206ENST00000592942 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
TRIM47-206ENST00000592942 BTAF1O14981 1849 aa20.55■□□□□ 0.88
TRIM47-206ENST00000592942 TXNRD1Q16881 649 aa20.54■□□□□ 0.88
TRIM47-206ENST00000592942 NUDCQ9Y266 331 aa20.54■□□□□ 0.88
TRIM47-206ENST00000592942 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
TRIM47-206ENST00000592942 TOGARAM1Q9Y4F4 1720 aa20.53■□□□□ 0.88
TRIM47-206ENST00000592942 PIGBQ92521 554 aa20.53■□□□□ 0.88
TRIM47-206ENST00000592942 RREB1Q92766 1687 aa20.53■□□□□ 0.88
TRIM47-206ENST00000592942 U2AF1L5P0DN76 240 aaPredicted RBP20.52■□□□□ 0.88
TRIM47-206ENST00000592942 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRIM47-206ENST00000592942 MPRIPQ6WCQ1 1025 aa20.52■□□□□ 0.88
TRIM47-206ENST00000592942 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
TRIM47-206ENST00000592942 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-206ENST00000592942 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
TRIM47-206ENST00000592942 FCHSD2O94868 740 aa20.51■□□□□ 0.87
TRIM47-206ENST00000592942 DCAF5Q96JK2 942 aa20.51■□□□□ 0.87
TRIM47-206ENST00000592942 LRRC4BQ9NT99 713 aa20.51■□□□□ 0.87
TRIM47-206ENST00000592942 KDM6AO15550 1401 aaPredicted RBP20.51■□□□□ 0.87
TRIM47-206ENST00000592942 ERVV-2B6SEH9 535 aa20.5■□□□□ 0.87
TRIM47-206ENST00000592942 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
TRIM47-206ENST00000592942 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
TRIM47-206ENST00000592942 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
TRIM47-206ENST00000592942 ITGB4P16144 1822 aa20.5■□□□□ 0.87
TRIM47-206ENST00000592942 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
TRIM47-206ENST00000592942 NUP188Q5SRE5 1749 aa20.49■□□□□ 0.87
TRIM47-206ENST00000592942 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
TRIM47-206ENST00000592942 KCNQ4P56696 695 aa20.47■□□□□ 0.87
TRIM47-206ENST00000592942 ANO8Q9HCE9 1232 aaPredicted RBP20.47■□□□□ 0.87
TRIM47-206ENST00000592942 PSDA5PKW4 1024 aaPredicted RBP20.46■□□□□ 0.87
TRIM47-206ENST00000592942 R3HDM1Q15032 1099 aaKnown RBP20.46■□□□□ 0.87
TRIM47-206ENST00000592942 PLEKHF1Q96S99 279 aa20.46■□□□□ 0.87
TRIM47-206ENST00000592942 ASAP1Q9ULH1 1129 aa20.46■□□□□ 0.87
TRIM47-206ENST00000592942 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.86
TRIM47-206ENST00000592942 ATG3Q9NT62 314 aa20.45■□□□□ 0.86
TRIM47-206ENST00000592942 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
TRIM47-206ENST00000592942 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
TRIM47-206ENST00000592942 NBPF14Q5TI25 921 aa20.44■□□□□ 0.86
TRIM47-206ENST00000592942 NFATC2IPQ8NCF5 419 aa20.44■□□□□ 0.86
TRIM47-206ENST00000592942 LY75O60449 1722 aa20.44■□□□□ 0.86
TRIM47-206ENST00000592942 CABP4P57796 275 aa20.43■□□□□ 0.86
TRIM47-206ENST00000592942 IL17REQ8NFR9 667 aa20.43■□□□□ 0.86
TRIM47-206ENST00000592942 GAS2L2Q8NHY3 880 aa20.43■□□□□ 0.86
TRIM47-206ENST00000592942 CCDC184Q52MB2 194 aa20.42■□□□□ 0.86
TRIM47-206ENST00000592942 SMARCC1Q92922 1105 aaPredicted RBP20.42■□□□□ 0.86
TRIM47-206ENST00000592942 PALLDQ8WX93 1383 aa20.42■□□□□ 0.86
TRIM47-206ENST00000592942 LRP5O75197 1615 aa20.42■□□□□ 0.86
TRIM47-206ENST00000592942 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
TRIM47-206ENST00000592942 GNAT3A8MTJ3 354 aa20.4■□□□□ 0.86
TRIM47-206ENST00000592942 SLC15A2Q16348 729 aa20.4■□□□□ 0.86
TRIM47-206ENST00000592942 AKT1S1Q96B36 256 aa20.4■□□□□ 0.86
TRIM47-206ENST00000592942 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
TRIM47-206ENST00000592942 CCNL1Q9UK58 526 aaPredicted RBP20.4■□□□□ 0.86
TRIM47-206ENST00000592942 ADAMTS7Q9UKP4 1686 aa20.4■□□□□ 0.86
TRIM47-206ENST00000592942 PAPPAQ13219 1627 aa20.39■□□□□ 0.86
TRIM47-206ENST00000592942 ZNF827Q17R98 1081 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms