RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 CGNL1Q0VF96 1302 aa30.42■■■□□ 2.46
PTPN2-215ENST00000592776 SHANK3Q9BYB0 1731 aa30.42■■■□□ 2.46
PTPN2-215ENST00000592776 STK32BQ9NY57 414 aa30.41■■■□□ 2.46
PTPN2-215ENST00000592776 PRIM1P49642 420 aaKnown RBP30.4■■■□□ 2.46
PTPN2-215ENST00000592776 SYTL4Q96C24 671 aaPredicted RBP30.4■■■□□ 2.46
PTPN2-215ENST00000592776 SPON1Q9HCB6 807 aa30.4■■■□□ 2.46
PTPN2-215ENST00000592776 SLC15A2Q16348 729 aa30.39■■■□□ 2.46
PTPN2-215ENST00000592776 RAPGEF4Q8WZA2 1011 aa30.39■■■□□ 2.46
PTPN2-215ENST00000592776 PANK3Q9H999 370 aa30.39■■■□□ 2.46
PTPN2-215ENST00000592776 KIF24Q5T7B8 1368 aa30.39■■■□□ 2.45
PTPN2-215ENST00000592776 TNNT2P45379 298 aaPredicted RBP30.38■■■□□ 2.45
PTPN2-215ENST00000592776 LRRC4BQ9NT99 713 aa30.38■■■□□ 2.45
PTPN2-215ENST00000592776 CASZ1Q86V15 1759 aa30.37■■■□□ 2.45
PTPN2-215ENST00000592776 ZBTB7AO95365 584 aa30.37■■■□□ 2.45
PTPN2-215ENST00000592776 TATP17735 454 aaPredicted RBP30.37■■■□□ 2.45
PTPN2-215ENST00000592776 POLKQ9UBT6 870 aa30.36■■■□□ 2.45
PTPN2-215ENST00000592776 DOT1LQ8TEK3 1739 aa30.35■■■□□ 2.45
PTPN2-215ENST00000592776 KCNQ4P56696 695 aa30.34■■■□□ 2.45
PTPN2-215ENST00000592776 NSD2O96028 1365 aa30.33■■■□□ 2.45
PTPN2-215ENST00000592776 ATF5Q9Y2D1 282 aaPredicted RBP30.33■■■□□ 2.45
PTPN2-215ENST00000592776 WASHC2AQ641Q2 1341 aa30.32■■■□□ 2.44
PTPN2-215ENST00000592776 MAP2P11137 1827 aaKnown RBP30.32■■■□□ 2.44
PTPN2-215ENST00000592776 ZNF827Q17R98 1081 aa30.32■■■□□ 2.44
PTPN2-215ENST00000592776 PPP1R1BQ9UD71 204 aaPredicted RBP30.32■■■□□ 2.44
PTPN2-215ENST00000592776 PAPPAQ13219 1627 aa30.3■■■□□ 2.44
PTPN2-215ENST00000592776 ANKRD26Q9UPS8 1709 aa30.3■■■□□ 2.44
PTPN2-215ENST00000592776 EYA1Q99502 592 aa30.29■■■□□ 2.44
PTPN2-215ENST00000592776 CYP27B1O15528 508 aa30.27■■■□□ 2.44
PTPN2-215ENST00000592776 PTGER2P43116 358 aa30.25■■■□□ 2.43
PTPN2-215ENST00000592776 PCDH11XQ9BZA7 1347 aa30.24■■■□□ 2.43
PTPN2-215ENST00000592776 PCDH11YQ9BZA8 1340 aa30.24■■■□□ 2.43
PTPN2-215ENST00000592776 NCAPD2Q15021 1401 aa30.23■■■□□ 2.43
PTPN2-215ENST00000592776 EIF4A2Q14240 407 aaKnown RBP30.23■■■□□ 2.43
PTPN2-215ENST00000592776 SLC27A3Q5K4L6 730 aa30.23■■■□□ 2.43
PTPN2-215ENST00000592776 AKT1S1Q96B36 256 aa30.23■■■□□ 2.43
PTPN2-215ENST00000592776 KIF7Q2M1P5 1343 aa30.2■■■□□ 2.42
PTPN2-215ENST00000592776 MTFR1LQ9H019 292 aa30.19■■■□□ 2.42
PTPN2-215ENST00000592776 LY75O60449 1722 aa30.19■■■□□ 2.42
PTPN2-215ENST00000592776 MPRIPQ6WCQ1 1025 aa30.18■■■□□ 2.42
PTPN2-215ENST00000592776 MORC1Q86VD1 984 aa30.18■■■□□ 2.42
PTPN2-215ENST00000592776 CCNL1Q9UK58 526 aaPredicted RBP30.18■■■□□ 2.42
PTPN2-215ENST00000592776 PKD1L3Q7Z443 1732 aa30.17■■■□□ 2.42
PTPN2-215ENST00000592776 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
PTPN2-215ENST00000592776 SGIP1Q9BQI5 828 aa30.15■■■□□ 2.42
PTPN2-215ENST00000592776 SPG7Q9UQ90 795 aa30.15■■■□□ 2.42
PTPN2-215ENST00000592776 KNSTRNQ9Y448 316 aa30.15■■■□□ 2.42
PTPN2-215ENST00000592776 PNPLA7Q6ZV29 1317 aa30.14■■■□□ 2.42
PTPN2-215ENST00000592776 TFCP2L1Q9NZI6 479 aa30.13■■■□□ 2.41
PTPN2-215ENST00000592776 NKX1-1Q15270 411 aaPredicted RBP30.12■■■□□ 2.41
PTPN2-215ENST00000592776 PIGBQ92521 554 aa30.1■■■□□ 2.41
PTPN2-215ENST00000592776 TUBGCP6Q96RT7 1819 aa30.1■■■□□ 2.41
PTPN2-215ENST00000592776 ITGB4P16144 1822 aa30.09■■■□□ 2.41
PTPN2-215ENST00000592776 AMER1Q5JTC6 1135 aaPredicted RBP30.09■■■□□ 2.41
PTPN2-215ENST00000592776 IGSF1Q8N6C5 1336 aa30.09■■■□□ 2.41
PTPN2-215ENST00000592776 PALLDQ8WX93 1383 aa30.09■■■□□ 2.41
PTPN2-215ENST00000592776 FHDC1Q9C0D6 1143 aaPredicted RBP30.09■■■□□ 2.41
PTPN2-215ENST00000592776 PHKG2P15735 406 aa30.08■■■□□ 2.41
PTPN2-215ENST00000592776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.08■■■□□ 2.417e-7■■■□□ 14.8
PTPN2-215ENST00000592776 IFNL2Q8IZJ0 200 aa30.06■■■□□ 2.4
PTPN2-215ENST00000592776 QSER1Q2KHR3 1735 aa30.05■■■□□ 2.4
PTPN2-215ENST00000592776 AEBP1Q8IUX7 1158 aa30.05■■■□□ 2.4
PTPN2-215ENST00000592776 ARXQ96QS3 562 aa30.05■■■□□ 2.4
PTPN2-215ENST00000592776 SYT17Q9BSW7 474 aa30.05■■■□□ 2.4
PTPN2-215ENST00000592776 COL23A1Q86Y22 540 aaPredicted RBP30.03■■■□□ 2.4
PTPN2-215ENST00000592776 PER1O15534 1290 aaPredicted RBP30.02■■■□□ 2.4
PTPN2-215ENST00000592776 SLC16A10Q8TF71 515 aa30.02■■■□□ 2.4
PTPN2-215ENST00000592776 MSH5O43196 834 aa30.01■■■□□ 2.39
PTPN2-215ENST00000592776 SMARCC1Q92922 1105 aaPredicted RBP30.01■■■□□ 2.39
PTPN2-215ENST00000592776 CC2D1BQ5T0F9 858 aaKnown RBP30■■■□□ 2.39
PTPN2-215ENST00000592776 TMOD3Q9NYL9 352 aa30■■■□□ 2.39
PTPN2-215ENST00000592776 ASAP1Q9ULH1 1129 aa30■■■□□ 2.39
PTPN2-215ENST00000592776 C5P01031 1676 aa30■■■□□ 2.39
PTPN2-215ENST00000592776 CNGB1Q14028 1251 aaPredicted RBP29.99■■■□□ 2.39
PTPN2-215ENST00000592776 IL13P35225 146 aa29.98■■■□□ 2.39
PTPN2-215ENST00000592776 SMIM5Q71RC9 77 aa29.98■■■□□ 2.39
PTPN2-215ENST00000592776 DCAF8L1A6NGE4 600 aa29.97■■■□□ 2.39
PTPN2-215ENST00000592776 PLEKHO1Q53GL0 409 aaPredicted RBP29.97■■■□□ 2.39
PTPN2-215ENST00000592776 SULT6B1Q6IMI4 303 aa29.97■■■□□ 2.39
PTPN2-215ENST00000592776 TAF1LQ8IZX4 1826 aa29.96■■■□□ 2.39
PTPN2-215ENST00000592776 MTHFSP49914 203 aa29.96■■■□□ 2.39
PTPN2-215ENST00000592776 AMIGO3Q86WK7 504 aa29.96■■■□□ 2.39
PTPN2-215ENST00000592776 MSL1Q68DK7 614 aa29.95■■■□□ 2.39
PTPN2-215ENST00000592776 ZNF530Q6P9A1 599 aaPredicted RBP29.95■■■□□ 2.39
PTPN2-215ENST00000592776 KLHL34Q8N239 644 aa29.95■■■□□ 2.39
PTPN2-215ENST00000592776 LOC102724428A0A0B4J2F2 783 aa29.94■■■□□ 2.38
PTPN2-215ENST00000592776 POLD1P28340 1107 aa29.94■■■□□ 2.38
PTPN2-215ENST00000592776 SIK1P57059 783 aa29.94■■■□□ 2.38
PTPN2-215ENST00000592776 ATG3Q9NT62 314 aa29.94■■■□□ 2.38
PTPN2-215ENST00000592776 LINC00116Q8NCU8 138 aa29.93■■■□□ 2.38
PTPN2-215ENST00000592776 COL24A1Q17RW2 1714 aa29.93■■■□□ 2.38
PTPN2-215ENST00000592776 YY1P25490 414 aa29.92■■■□□ 2.38
PTPN2-215ENST00000592776 C4BP0C0L5 1744 aa29.91■■■□□ 2.38
PTPN2-215ENST00000592776 ITPK1Q13572 414 aa29.91■■■□□ 2.38
PTPN2-215ENST00000592776 KDM6AO15550 1401 aaPredicted RBP29.9■■■□□ 2.38
PTPN2-215ENST00000592776 AMOTQ4VCS5 1084 aa29.9■■■□□ 2.38
PTPN2-215ENST00000592776 AK7Q96M32 723 aa29.9■■■□□ 2.38
PTPN2-215ENST00000592776 PLEKHG2Q9H7P9 1386 aa29.9■■■□□ 2.38
PTPN2-215ENST00000592776 DCAF5Q96JK2 942 aa29.89■■■□□ 2.38
PTPN2-215ENST00000592776 PHF14O94880 888 aa29.88■■■□□ 2.37
PTPN2-215ENST00000592776 ATP6V1AP38606 617 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms