RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 RGPD1P0DJD0 1748 aa16.11■□□□□ 0.17
H3F3B-212ENST00000592643 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
H3F3B-212ENST00000592643 CCDC125Q86Z20 511 aa16.09■□□□□ 0.17
H3F3B-212ENST00000592643 TNS1Q9HBL0 1735 aaKnown RBP16.08■□□□□ 0.17
H3F3B-212ENST00000592643 KCNQ2O43526 872 aa16.08■□□□□ 0.16
H3F3B-212ENST00000592643 ZCRB1Q8TBF4 217 aaKnown RBP16.08■□□□□ 0.16
H3F3B-212ENST00000592643 KDRP35968 1356 aa16.08■□□□□ 0.16
H3F3B-212ENST00000592643 CYP27B1O15528 508 aa16.07■□□□□ 0.16
H3F3B-212ENST00000592643 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
H3F3B-212ENST00000592643 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
H3F3B-212ENST00000592643 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
H3F3B-212ENST00000592643 TATP17735 454 aaPredicted RBP16.05■□□□□ 0.16
H3F3B-212ENST00000592643 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
H3F3B-212ENST00000592643 SULT6B1Q6IMI4 303 aa16.04■□□□□ 0.16
H3F3B-212ENST00000592643 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
H3F3B-212ENST00000592643 CAMKK2Q96RR4 588 aa16.04■□□□□ 0.16
H3F3B-212ENST00000592643 PKD1L3Q7Z443 1732 aa16.04■□□□□ 0.16
H3F3B-212ENST00000592643 SBF2Q86WG5 1849 aa16.03■□□□□ 0.16
H3F3B-212ENST00000592643 DIAPH1O60610 1272 aaKnown RBP16.03■□□□□ 0.16
H3F3B-212ENST00000592643 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
H3F3B-212ENST00000592643 SRCAPQ6ZRS2 3230 aa16.03■□□□□ 0.16
H3F3B-212ENST00000592643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.16
H3F3B-212ENST00000592643 APBA3O96018 575 aa16.01■□□□□ 0.15
H3F3B-212ENST00000592643 HMOX1P09601 288 aa16.01■□□□□ 0.15
H3F3B-212ENST00000592643 EZH2Q15910 746 aaKnown RBP16.01■□□□□ 0.15
H3F3B-212ENST00000592643 PROM2Q8N271 834 aa16.01■□□□□ 0.15
H3F3B-212ENST00000592643 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
H3F3B-212ENST00000592643 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
H3F3B-212ENST00000592643 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
H3F3B-212ENST00000592643 PLEKHG2Q9H7P9 1386 aa16■□□□□ 0.15
H3F3B-212ENST00000592643 NHSQ6T4R5 1651 aa15.99■□□□□ 0.15
H3F3B-212ENST00000592643 PHKG2P15735 406 aa15.99■□□□□ 0.15
H3F3B-212ENST00000592643 PRIM1P49642 420 aaKnown RBP15.99■□□□□ 0.15
H3F3B-212ENST00000592643 BAG6P46379 1132 aa15.98■□□□□ 0.15
H3F3B-212ENST00000592643 SF3B2Q13435 895 aaKnown RBP15.98■□□□□ 0.15
H3F3B-212ENST00000592643 RALBP1Q15311 655 aa15.98■□□□□ 0.15
H3F3B-212ENST00000592643 PRKRIP1Q9H875 184 aaPredicted RBP15.98■□□□□ 0.15
H3F3B-212ENST00000592643 TOGARAM1Q9Y4F4 1720 aa15.98■□□□□ 0.15
H3F3B-212ENST00000592643 PLSCR1O15162 318 aa15.97■□□□□ 0.15
H3F3B-212ENST00000592643 SPG7Q9UQ90 795 aa15.97■□□□□ 0.15
H3F3B-212ENST00000592643 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
H3F3B-212ENST00000592643 DOT1LQ8TEK3 1739 aa15.96■□□□□ 0.15
H3F3B-212ENST00000592643 KDM6AO15550 1401 aaPredicted RBP15.95■□□□□ 0.14
H3F3B-212ENST00000592643 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
H3F3B-212ENST00000592643 PHACTR3Q96KR7 559 aa15.95■□□□□ 0.14
H3F3B-212ENST00000592643 MTHFSDQ2M296 383 aaKnown RBP15.94■□□□□ 0.14
H3F3B-212ENST00000592643 PLEKHO1Q53GL0 409 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-212ENST00000592643 IFNL2Q8IZJ0 200 aa15.94■□□□□ 0.14
H3F3B-212ENST00000592643 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
H3F3B-212ENST00000592643 RREB1Q92766 1687 aa15.93■□□□□ 0.14
H3F3B-212ENST00000592643 AMOTQ4VCS5 1084 aa15.93■□□□□ 0.14
H3F3B-212ENST00000592643 ZNF530Q6P9A1 599 aaPredicted RBP15.93■□□□□ 0.14
H3F3B-212ENST00000592643 CFAP53Q96M91 514 aa15.93■□□□□ 0.14
H3F3B-212ENST00000592643 BTAF1O14981 1849 aa15.92■□□□□ 0.14
H3F3B-212ENST00000592643 PIGBQ92521 554 aa15.92■□□□□ 0.14
H3F3B-212ENST00000592643 LRRC4BQ9NT99 713 aa15.92■□□□□ 0.14
H3F3B-212ENST00000592643 RGPD3A6NKT7 1758 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-212ENST00000592643 RGPD4Q7Z3J3 1758 aa15.91■□□□□ 0.14
H3F3B-212ENST00000592643 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
H3F3B-212ENST00000592643 CCDC184Q52MB2 194 aa15.91■□□□□ 0.14
H3F3B-212ENST00000592643 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-212ENST00000592643 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-212ENST00000592643 NUP188Q5SRE5 1749 aa15.91■□□□□ 0.14
H3F3B-212ENST00000592643 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
H3F3B-212ENST00000592643 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
H3F3B-212ENST00000592643 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
H3F3B-212ENST00000592643 MPRIPQ6WCQ1 1025 aa15.9■□□□□ 0.14
H3F3B-212ENST00000592643 KCNQ4P56696 695 aa15.89■□□□□ 0.13
H3F3B-212ENST00000592643 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
H3F3B-212ENST00000592643 LGR6Q9HBX8 967 aa15.89■□□□□ 0.13
H3F3B-212ENST00000592643 FCHSD2O94868 740 aa15.88■□□□□ 0.13
H3F3B-212ENST00000592643 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
H3F3B-212ENST00000592643 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
H3F3B-212ENST00000592643 NUDCQ9Y266 331 aa15.88■□□□□ 0.13
H3F3B-212ENST00000592643 ADAMTS7Q9UKP4 1686 aa15.87■□□□□ 0.13
H3F3B-212ENST00000592643 ASAP1Q9ULH1 1129 aa15.87■□□□□ 0.13
H3F3B-212ENST00000592643 PAPPAQ13219 1627 aa15.86■□□□□ 0.13
H3F3B-212ENST00000592643 PSDA5PKW4 1024 aaPredicted RBP15.86■□□□□ 0.13
H3F3B-212ENST00000592643 ERVV-2B6SEH9 535 aa15.86■□□□□ 0.13
H3F3B-212ENST00000592643 ATG3Q9NT62 314 aa15.86■□□□□ 0.13
H3F3B-212ENST00000592643 ITGB4P16144 1822 aa15.85■□□□□ 0.13
H3F3B-212ENST00000592643 C1orf141Q5JVX7 400 aa15.85■□□□□ 0.13
H3F3B-212ENST00000592643 IL17REQ8NFR9 667 aa15.85■□□□□ 0.13
H3F3B-212ENST00000592643 MRC1P22897 1456 aa15.84■□□□□ 0.13
H3F3B-212ENST00000592643 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
H3F3B-212ENST00000592643 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
H3F3B-212ENST00000592643 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
H3F3B-212ENST00000592643 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
H3F3B-212ENST00000592643 PDGFDQ9GZP0 370 aaPredicted RBP15.84■□□□□ 0.13
H3F3B-212ENST00000592643 LY75O60449 1722 aa15.84■□□□□ 0.13
H3F3B-212ENST00000592643 PALLDQ8WX93 1383 aa15.84■□□□□ 0.13
H3F3B-212ENST00000592643 ZNF827Q17R98 1081 aa15.83■□□□□ 0.12
H3F3B-212ENST00000592643 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
H3F3B-212ENST00000592643 TMOD3Q9NYL9 352 aa15.83■□□□□ 0.12
H3F3B-212ENST00000592643 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
H3F3B-212ENST00000592643 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
H3F3B-212ENST00000592643 CEMIPQ8WUJ3 1361 aa15.82■□□□□ 0.12
H3F3B-212ENST00000592643 SLC27A3Q5K4L6 730 aa15.81■□□□□ 0.12
H3F3B-212ENST00000592643 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
H3F3B-212ENST00000592643 SLC52A2Q9HAB3 445 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms