RNA–Protein interactions for RNA: ENST00000592483.5

CAPNS1-214, Transcript of calpain small subunit 1, humanhuman

TSL 5

Gene CAPNS1, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-214ENST00000592483 ZNF316A6NFI3 1004 aaPredicted RBP32.62■■■□□ 2.81
CAPNS1-214ENST00000592483 NLRP2Q9NX02 1062 aa32.62■■■□□ 2.81
CAPNS1-214ENST00000592483 ERBB3P21860 1342 aa32.58■■■□□ 2.81
CAPNS1-214ENST00000592483 KIF7Q2M1P5 1343 aa32.58■■■□□ 2.81
CAPNS1-214ENST00000592483 WASHC2AQ641Q2 1341 aa32.54■■■□□ 2.8
CAPNS1-214ENST00000592483 TUBGCP6Q96RT7 1819 aa32.53■■■□□ 2.8
CAPNS1-214ENST00000592483 KCNQ4P56696 695 aa32.51■■■□□ 2.79
CAPNS1-214ENST00000592483 ADCY9O60503 1353 aa32.5■■■□□ 2.79
CAPNS1-214ENST00000592483 DDX54Q8TDD1 881 aaKnown RBP32.47■■■□□ 2.79
CAPNS1-214ENST00000592483 ANKRD24Q8TF21 1146 aa32.46■■■□□ 2.79
CAPNS1-214ENST00000592483 ZNF526Q8TF50 670 aaPredicted RBP32.46■■■□□ 2.79
CAPNS1-214ENST00000592483 POLR3GLQ9BT43 218 aa32.46■■■□□ 2.79
CAPNS1-214ENST00000592483 CD2APQ9Y5K6 639 aa32.46■■■□□ 2.79
CAPNS1-214ENST00000592483 KTN1Q86UP2 1357 aaKnown RBP32.45■■■□□ 2.79
CAPNS1-214ENST00000592483 MSH5O43196 834 aa32.45■■■□□ 2.79
CAPNS1-214ENST00000592483 COL23A1Q86Y22 540 aaPredicted RBP32.44■■■□□ 2.78
CAPNS1-214ENST00000592483 PRIM1P49642 420 aaKnown RBP32.43■■■□□ 2.78
CAPNS1-214ENST00000592483 SYTL4Q96C24 671 aaPredicted RBP32.43■■■□□ 2.78
CAPNS1-214ENST00000592483 USP31Q70CQ4 1352 aa32.43■■■□□ 2.78
CAPNS1-214ENST00000592483 TMC1Q8TDI8 760 aa32.41■■■□□ 2.78
CAPNS1-214ENST00000592483 ANKRD36BQ8N2N9 1353 aa32.41■■■□□ 2.78
CAPNS1-214ENST00000592483 LY75O60449 1722 aa32.4■■■□□ 2.78
CAPNS1-214ENST00000592483 CCNL1Q9UK58 526 aaPredicted RBP32.4■■■□□ 2.78
CAPNS1-214ENST00000592483 TERF2IPQ9NYB0 399 aa32.39■■■□□ 2.78
CAPNS1-214ENST00000592483 MSL1Q68DK7 614 aa32.37■■■□□ 2.77
CAPNS1-214ENST00000592483 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.37■■■□□ 2.77
CAPNS1-214ENST00000592483 SLC12A5Q9H2X9 1139 aa32.37■■■□□ 2.77
CAPNS1-214ENST00000592483 LTN1O94822 1766 aa32.37■■■□□ 2.77
CAPNS1-214ENST00000592483 HDGFL2Q7Z4V5 671 aaPredicted RBP32.36■■■□□ 2.77
CAPNS1-214ENST00000592483 NSD2O96028 1365 aa32.35■■■□□ 2.77
CAPNS1-214ENST00000592483 APLP1P51693 650 aa32.35■■■□□ 2.77
CAPNS1-214ENST00000592483 USP54Q70EL1 1684 aa32.34■■■□□ 2.77
CAPNS1-214ENST00000592483 KIF3CO14782 793 aa32.34■■■□□ 2.77
CAPNS1-214ENST00000592483 CD163L1Q9NR16 1453 aa32.33■■■□□ 2.77
CAPNS1-214ENST00000592483 NME9Q86XW9 330 aa32.32■■■□□ 2.76
CAPNS1-214ENST00000592483 MON2Q7Z3U7 1717 aa32.31■■■□□ 2.76
CAPNS1-214ENST00000592483 A0A1W2PP64 1363 aa32.3■■■□□ 2.76
CAPNS1-214ENST00000592483 DOT1LQ8TEK3 1739 aa32.29■■■□□ 2.76
CAPNS1-214ENST00000592483 DNAJC5GQ8N7S2 189 aa32.29■■■□□ 2.76
CAPNS1-214ENST00000592483 FLAD1Q8NFF5 587 aa32.28■■■□□ 2.76
CAPNS1-214ENST00000592483 HMGB2P26583 209 aaKnown RBP32.27■■■□□ 2.76
CAPNS1-214ENST00000592483 IP6K1Q92551 441 aa32.26■■■□□ 2.75
CAPNS1-214ENST00000592483 PANK3Q9H999 370 aa32.26■■■□□ 2.75
CAPNS1-214ENST00000592483 EDC4Q6P2E9 1401 aaKnown RBP32.25■■■□□ 2.75
CAPNS1-214ENST00000592483 ZCRB1Q8TBF4 217 aaKnown RBP32.24■■■□□ 2.75
CAPNS1-214ENST00000592483 DDX10Q13206 875 aaKnown RBP32.23■■■□□ 2.75
CAPNS1-214ENST00000592483 FAM208AQ9UK61 1670 aaKnown RBP32.23■■■□□ 2.75
CAPNS1-214ENST00000592483 LTV1Q96GA3 475 aaPredicted RBP32.22■■■□□ 2.75
CAPNS1-214ENST00000592483 IGSF1Q8N6C5 1336 aa32.22■■■□□ 2.75
CAPNS1-214ENST00000592483 NSD3Q9BZ95 1437 aa32.19■■■□□ 2.74
CAPNS1-214ENST00000592483 TOMM70O94826 608 aa32.19■■■□□ 2.74
CAPNS1-214ENST00000592483 C5P01031 1676 aa32.18■■■□□ 2.74
CAPNS1-214ENST00000592483 KNSTRNQ9Y448 316 aa32.17■■■□□ 2.74
CAPNS1-214ENST00000592483 CARD14Q9BXL6 1004 aa32.16■■■□□ 2.74
CAPNS1-214ENST00000592483 WWC3Q9ULE0 1092 aa32.16■■■□□ 2.74
CAPNS1-214ENST00000592483 PER1O15534 1290 aaPredicted RBP32.15■■■□□ 2.74
CAPNS1-214ENST00000592483 CGNL1Q0VF96 1302 aa32.13■■■□□ 2.73
CAPNS1-214ENST00000592483 NPC1L1Q9UHC9 1359 aa32.12■■■□□ 2.73
CAPNS1-214ENST00000592483 MEGF6O75095 1541 aa32.1■■■□□ 2.73
CAPNS1-214ENST00000592483 COL13A1Q5TAT6 717 aaPredicted RBP32.1■■■□□ 2.73
CAPNS1-214ENST00000592483 TAF1LQ8IZX4 1826 aa32.09■■■□□ 2.73
CAPNS1-214ENST00000592483 CICQ96RK0 1608 aaPredicted RBP32.08■■■□□ 2.73
CAPNS1-214ENST00000592483 PALLDQ8WX93 1383 aa32.07■■■□□ 2.73
CAPNS1-214ENST00000592483 KIF20BQ96Q89 1820 aa32.06■■■□□ 2.72
CAPNS1-214ENST00000592483 HOXC9P31274 260 aa32.06■■■□□ 2.72
CAPNS1-214ENST00000592483 AK7Q96M32 723 aa32.06■■■□□ 2.72
CAPNS1-214ENST00000592483 MAP3K19Q56UN5 1328 aa32.04■■■□□ 2.72
CAPNS1-214ENST00000592483 AMER1Q5JTC6 1135 aaPredicted RBP32.04■■■□□ 2.72
CAPNS1-214ENST00000592483 AMIGO3Q86WK7 504 aa32.04■■■□□ 2.72
CAPNS1-214ENST00000592483 JMYQ8N9B5 988 aa32.04■■■□□ 2.72
CAPNS1-214ENST00000592483 AMPHP49418 695 aa32.03■■■□□ 2.72
CAPNS1-214ENST00000592483 KLRG1Q96E93 195 aa32.03■■■□□ 2.72
CAPNS1-214ENST00000592483 C4BP0C0L5 1744 aa32.03■■■□□ 2.72
CAPNS1-214ENST00000592483 RGPD2P0DJD1 1756 aa32.02■■■□□ 2.72
CAPNS1-214ENST00000592483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.02■■■□□ 2.72
CAPNS1-214ENST00000592483 CAPN15O75808 1086 aa32.02■■■□□ 2.72
CAPNS1-214ENST00000592483 WDR90Q96KV7 1748 aa32.01■■■□□ 2.72
CAPNS1-214ENST00000592483 FYB1O15117 783 aa32.01■■■□□ 2.71
CAPNS1-214ENST00000592483 PHF14O94880 888 aa32.01■■■□□ 2.71
CAPNS1-214ENST00000592483 MPRIPQ6WCQ1 1025 aa32■■■□□ 2.71
CAPNS1-214ENST00000592483 RBM46Q8TBY0 533 aaKnown RBP32■■■□□ 2.71
CAPNS1-214ENST00000592483 SMARCC1Q92922 1105 aaPredicted RBP32■■■□□ 2.71
CAPNS1-214ENST00000592483 NMRK2Q9NPI5 230 aa32■■■□□ 2.71
CAPNS1-214ENST00000592483 ANKRD26Q9UPS8 1709 aa32■■■□□ 2.71
CAPNS1-214ENST00000592483 RAPGEF4Q8WZA2 1011 aa31.99■■■□□ 2.71
CAPNS1-214ENST00000592483 TOGARAM1Q9Y4F4 1720 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 UBR3Q6ZT12 1888 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 SSFA2P28290 1259 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 PRELPP51888 382 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 NBPF6Q5VWK0 638 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 NBPF4Q96M43 638 aa31.98■■■□□ 2.71
CAPNS1-214ENST00000592483 TNS4Q8IZW8 715 aa31.97■■■□□ 2.71
CAPNS1-214ENST00000592483 SMIM5Q71RC9 77 aa31.96■■■□□ 2.71
CAPNS1-214ENST00000592483 COG3Q96JB2 828 aa31.96■■■□□ 2.71
CAPNS1-214ENST00000592483 PCDH11XQ9BZA7 1347 aa31.95■■■□□ 2.7
CAPNS1-214ENST00000592483 PCDH11YQ9BZA8 1340 aa31.95■■■□□ 2.7
CAPNS1-214ENST00000592483 TATP17735 454 aaPredicted RBP31.94■■■□□ 2.7
CAPNS1-214ENST00000592483 FBLN1P23142 703 aa31.94■■■□□ 2.7
CAPNS1-214ENST00000592483 TGFB2P61812 414 aa31.93■■■□□ 2.7
CAPNS1-214ENST00000592483 HTRA3P83110 453 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms