RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 SLC27A3Q5K4L6 730 aa25.85■■□□□ 1.73
CIRBP-238ENST00000592412 LY75O60449 1722 aa25.85■■□□□ 1.73
CIRBP-238ENST00000592412 CHD4Q14839 1912 aa25.84■■□□□ 1.73
CIRBP-238ENST00000592412 PRIM1P49642 420 aaKnown RBP25.83■■□□□ 1.73
CIRBP-238ENST00000592412 COG3Q96JB2 828 aa25.83■■□□□ 1.73
CIRBP-238ENST00000592412 SLC16A10Q8TF71 515 aa25.8■■□□□ 1.72
CIRBP-238ENST00000592412 SYTL4Q96C24 671 aaPredicted RBP25.8■■□□□ 1.72
CIRBP-238ENST00000592412 AMPHP49418 695 aa25.79■■□□□ 1.72
CIRBP-238ENST00000592412 ZCRB1Q8TBF4 217 aaKnown RBP25.78■■□□□ 1.72
CIRBP-238ENST00000592412 RTL1A6NKG5 1358 aa25.78■■□□□ 1.72
CIRBP-238ENST00000592412 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
CIRBP-238ENST00000592412 NBPF6Q5VWK0 638 aa25.77■■□□□ 1.72
CIRBP-238ENST00000592412 NBPF4Q96M43 638 aa25.77■■□□□ 1.72
CIRBP-238ENST00000592412 TFCP2L1Q9NZI6 479 aa25.76■■□□□ 1.71
CIRBP-238ENST00000592412 FYB1O15117 783 aa25.75■■□□□ 1.71
CIRBP-238ENST00000592412 USHBP1Q8N6Y0 703 aa25.74■■□□□ 1.71
CIRBP-238ENST00000592412 POLD1P28340 1107 aa25.73■■□□□ 1.71
CIRBP-238ENST00000592412 NLGN2Q8NFZ4 835 aa25.73■■□□□ 1.71
CIRBP-238ENST00000592412 GGNBP2Q9H3C7 697 aa25.73■■□□□ 1.71
CIRBP-238ENST00000592412 KLHL34Q8N239 644 aa25.72■■□□□ 1.71
CIRBP-238ENST00000592412 CCNL1Q9UK58 526 aaPredicted RBP25.72■■□□□ 1.71
CIRBP-238ENST00000592412 GPR162Q16538 588 aa25.71■■□□□ 1.71
CIRBP-238ENST00000592412 SLC24A1O60721 1099 aa25.68■■□□□ 1.7
CIRBP-238ENST00000592412 COL23A1Q86Y22 540 aaPredicted RBP25.68■■□□□ 1.7
CIRBP-238ENST00000592412 USP47Q96K76 1375 aa25.68■■□□□ 1.7
CIRBP-238ENST00000592412 CGNL1Q0VF96 1302 aa25.67■■□□□ 1.7
CIRBP-238ENST00000592412 HSP90AB2PQ58FF8 381 aa25.67■■□□□ 1.7
CIRBP-238ENST00000592412 C5P01031 1676 aa25.67■■□□□ 1.7
CIRBP-238ENST00000592412 KIF20BQ96Q89 1820 aa25.66■■□□□ 1.7
CIRBP-238ENST00000592412 C1QTNF8P60827 252 aa25.66■■□□□ 1.7
CIRBP-238ENST00000592412 INSRP06213 1382 aa25.66■■□□□ 1.7
CIRBP-238ENST00000592412 SMG6Q86US8 1419 aaKnown RBP25.65■■□□□ 1.7
CIRBP-238ENST00000592412 CEP350Q5VT06 3117 aa25.65■■□□□ 1.7
CIRBP-238ENST00000592412 TOGARAM1Q9Y4F4 1720 aa25.65■■□□□ 1.7
CIRBP-238ENST00000592412 TMF1P82094 1093 aa25.64■■□□□ 1.7
CIRBP-238ENST00000592412 RAPGEF4Q8WZA2 1011 aa25.64■■□□□ 1.7
CIRBP-238ENST00000592412 PELP1Q8IZL8 1130 aaKnown RBP25.63■■□□□ 1.69
CIRBP-238ENST00000592412 FLT4P35916 1363 aa25.63■■□□□ 1.69
CIRBP-238ENST00000592412 TAF1LQ8IZX4 1826 aa25.63■■□□□ 1.69
CIRBP-238ENST00000592412 YBX3P16989 372 aaKnown RBP eCLIP25.62■■□□□ 1.69
CIRBP-238ENST00000592412 TATP17735 454 aaPredicted RBP25.62■■□□□ 1.69
CIRBP-238ENST00000592412 CYP27B1O15528 508 aa25.61■■□□□ 1.69
CIRBP-238ENST00000592412 MSL1Q68DK7 614 aa25.61■■□□□ 1.69
CIRBP-238ENST00000592412 PCDH11XQ9BZA7 1347 aa25.61■■□□□ 1.69
CIRBP-238ENST00000592412 PCDH11YQ9BZA8 1340 aa25.61■■□□□ 1.69
CIRBP-238ENST00000592412 KIF24Q5T7B8 1368 aa25.6■■□□□ 1.69
CIRBP-238ENST00000592412 SENP3-EIF4A1A0A087X0R7 540 aa25.6■■□□□ 1.69
CIRBP-238ENST00000592412 PKD1L3Q7Z443 1732 aa25.6■■□□□ 1.69
CIRBP-238ENST00000592412 PALLDQ8WX93 1383 aa25.59■■□□□ 1.69
CIRBP-238ENST00000592412 MSH5O43196 834 aa25.59■■□□□ 1.69
CIRBP-238ENST00000592412 CARD14Q9BXL6 1004 aa25.59■■□□□ 1.69
CIRBP-238ENST00000592412 NCAPD2Q15021 1401 aa25.59■■□□□ 1.69
CIRBP-238ENST00000592412 EMILIN1Q9Y6C2 1016 aa25.58■■□□□ 1.69
CIRBP-238ENST00000592412 AMIGO3Q86WK7 504 aa25.57■■□□□ 1.68
CIRBP-238ENST00000592412 ITGB4P16144 1822 aa25.57■■□□□ 1.68
CIRBP-238ENST00000592412 MPRIPQ6WCQ1 1025 aa25.56■■□□□ 1.68
CIRBP-238ENST00000592412 C4BP0C0L5 1744 aa25.56■■□□□ 1.68
CIRBP-238ENST00000592412 ANKRD26Q9UPS8 1709 aa25.55■■□□□ 1.68
CIRBP-238ENST00000592412 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
CIRBP-238ENST00000592412 MAP2P11137 1827 aaKnown RBP25.52■■□□□ 1.68
CIRBP-238ENST00000592412 GIGYF1O75420 1035 aaPredicted RBP25.52■■□□□ 1.68
CIRBP-238ENST00000592412 UBR3Q6ZT12 1888 aa25.51■■□□□ 1.67
CIRBP-238ENST00000592412 GRIN3BO60391 1043 aa25.51■■□□□ 1.67
CIRBP-238ENST00000592412 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
CIRBP-238ENST00000592412 NKX1-1Q15270 411 aaPredicted RBP25.5■■□□□ 1.67
CIRBP-238ENST00000592412 PIGBQ92521 554 aa25.5■■□□□ 1.67
CIRBP-238ENST00000592412 CDCA8Q53HL2 280 aa25.49■■□□□ 1.67
CIRBP-238ENST00000592412 FLAD1Q8NFF5 587 aa25.49■■□□□ 1.67
CIRBP-238ENST00000592412 CD2APQ9Y5K6 639 aa25.49■■□□□ 1.67
CIRBP-238ENST00000592412 SMARCC1Q92922 1105 aaPredicted RBP25.47■■□□□ 1.67
CIRBP-238ENST00000592412 WASHC2AQ641Q2 1341 aa25.45■■□□□ 1.66
CIRBP-238ENST00000592412 AK7Q96M32 723 aa25.45■■□□□ 1.66
CIRBP-238ENST00000592412 EYA1Q99502 592 aa25.45■■□□□ 1.66
CIRBP-238ENST00000592412 ATP10DQ9P241 1426 aa25.45■■□□□ 1.66
CIRBP-238ENST00000592412 PPM1GO15355 546 aaPredicted RBP25.44■■□□□ 1.66
CIRBP-238ENST00000592412 LINC00116Q8NCU8 138 aa25.44■■□□□ 1.66
CIRBP-238ENST00000592412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.43■■□□□ 1.66
CIRBP-238ENST00000592412 PHF14O94880 888 aa25.43■■□□□ 1.66
CIRBP-238ENST00000592412 ADCY9O60503 1353 aa25.43■■□□□ 1.66
CIRBP-238ENST00000592412 HMGB2P26583 209 aaKnown RBP25.42■■□□□ 1.66
CIRBP-238ENST00000592412 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
CIRBP-238ENST00000592412 LOC102724428A0A0B4J2F2 783 aa25.41■■□□□ 1.66
CIRBP-238ENST00000592412 SIK1P57059 783 aa25.41■■□□□ 1.66
CIRBP-238ENST00000592412 ITPK1Q13572 414 aa25.41■■□□□ 1.66
CIRBP-238ENST00000592412 POLKQ9UBT6 870 aa25.41■■□□□ 1.66
CIRBP-238ENST00000592412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.4■■□□□ 1.664e-13■□□□□ 8.8
CIRBP-238ENST00000592412 ASAP1Q9ULH1 1129 aa25.4■■□□□ 1.66
CIRBP-238ENST00000592412 SSFA2P28290 1259 aa25.39■■□□□ 1.66
CIRBP-238ENST00000592412 IGSF1Q8N6C5 1336 aa25.38■■□□□ 1.65
CIRBP-238ENST00000592412 PHKG2P15735 406 aa25.38■■□□□ 1.65
CIRBP-238ENST00000592412 TMOD3Q9NYL9 352 aa25.37■■□□□ 1.65
CIRBP-238ENST00000592412 WWC3Q9ULE0 1092 aa25.36■■□□□ 1.65
CIRBP-238ENST00000592412 EIF4A2Q14240 407 aaKnown RBP25.35■■□□□ 1.65
CIRBP-238ENST00000592412 IFNL2Q8IZJ0 200 aa25.35■■□□□ 1.65
CIRBP-238ENST00000592412 ATG3Q9NT62 314 aa25.35■■□□□ 1.65
CIRBP-238ENST00000592412 KDRP35968 1356 aa25.34■■□□□ 1.65
CIRBP-238ENST00000592412 GNPATO15228 680 aa25.33■■□□□ 1.65
CIRBP-238ENST00000592412 ATP6V1AP38606 617 aa25.33■■□□□ 1.65
CIRBP-238ENST00000592412 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
CIRBP-238ENST00000592412 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms