RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 EYA1Q99502 592 aa19.77■□□□□ 0.76
DDX39A-217ENST00000592391 PTF1AQ7RTS3 328 aa19.76■□□□□ 0.75
DDX39A-217ENST00000592391 PLSCR1O15162 318 aa19.74■□□□□ 0.75
DDX39A-217ENST00000592391 KCNQ2O43526 872 aa19.73■□□□□ 0.75
DDX39A-217ENST00000592391 ACSBG1Q96GR2 724 aa19.73■□□□□ 0.75
DDX39A-217ENST00000592391 SHANK3Q9BYB0 1731 aa19.73■□□□□ 0.75
DDX39A-217ENST00000592391 NHSQ6T4R5 1651 aa19.72■□□□□ 0.75
DDX39A-217ENST00000592391 IGSF1Q8N6C5 1336 aa19.72■□□□□ 0.75
DDX39A-217ENST00000592391 MTHFSP49914 203 aa19.71■□□□□ 0.75
DDX39A-217ENST00000592391 PCDH11XQ9BZA7 1347 aa19.71■□□□□ 0.75
DDX39A-217ENST00000592391 PCDH11YQ9BZA8 1340 aa19.71■□□□□ 0.75
DDX39A-217ENST00000592391 CNGB1Q14028 1251 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-217ENST00000592391 RREB1Q92766 1687 aa19.7■□□□□ 0.74
DDX39A-217ENST00000592391 RGPD3A6NKT7 1758 aaPredicted RBP19.7■□□□□ 0.74
DDX39A-217ENST00000592391 RGPD4Q7Z3J3 1758 aa19.7■□□□□ 0.74
DDX39A-217ENST00000592391 ZEB1P37275 1124 aaPredicted RBP19.69■□□□□ 0.74
DDX39A-217ENST00000592391 IL13P35225 146 aa19.68■□□□□ 0.74
DDX39A-217ENST00000592391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDX39A-217ENST00000592391 PLEKHG2Q9H7P9 1386 aa19.68■□□□□ 0.74
DDX39A-217ENST00000592391 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
DDX39A-217ENST00000592391 SPG7Q9UQ90 795 aa19.67■□□□□ 0.74
DDX39A-217ENST00000592391 CYP27B1O15528 508 aa19.66■□□□□ 0.74
DDX39A-217ENST00000592391 NUP188Q5SRE5 1749 aa19.65■□□□□ 0.74
DDX39A-217ENST00000592391 PRIM1P49642 420 aaKnown RBP19.65■□□□□ 0.74
DDX39A-217ENST00000592391 PSDA5PKW4 1024 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-217ENST00000592391 PROM2Q8N271 834 aa19.64■□□□□ 0.73
DDX39A-217ENST00000592391 SYTL4Q96C24 671 aaPredicted RBP19.64■□□□□ 0.73
DDX39A-217ENST00000592391 DOT1LQ8TEK3 1739 aa19.64■□□□□ 0.73
DDX39A-217ENST00000592391 BTAF1O14981 1849 aa19.64■□□□□ 0.73
DDX39A-217ENST00000592391 R3HDM1Q15032 1099 aaKnown RBP19.63■□□□□ 0.73
DDX39A-217ENST00000592391 TXNRD1Q16881 649 aa19.63■□□□□ 0.73
DDX39A-217ENST00000592391 NBPF14Q5TI25 921 aa19.63■□□□□ 0.73
DDX39A-217ENST00000592391 KDRP35968 1356 aa19.62■□□□□ 0.73
DDX39A-217ENST00000592391 SULT6B1Q6IMI4 303 aa19.62■□□□□ 0.73
DDX39A-217ENST00000592391 AEBP1Q8IUX7 1158 aa19.62■□□□□ 0.73
DDX39A-217ENST00000592391 KAT6BQ8WYB5 2073 aa19.61■□□□□ 0.73
DDX39A-217ENST00000592391 DIAPH1O60610 1272 aaKnown RBP19.61■□□□□ 0.73
DDX39A-217ENST00000592391 NKX1-1Q15270 411 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-217ENST00000592391 PHKG2P15735 406 aa19.6■□□□□ 0.73
DDX39A-217ENST00000592391 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
DDX39A-217ENST00000592391 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-217ENST00000592391 AMOTQ4VCS5 1084 aa19.59■□□□□ 0.73
DDX39A-217ENST00000592391 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-217ENST00000592391 PPP2R1AP30153 589 aa19.58■□□□□ 0.72
DDX39A-217ENST00000592391 SRCAPQ6ZRS2 3230 aa19.58■□□□□ 0.72
DDX39A-217ENST00000592391 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-217ENST00000592391 CFAP53Q96M91 514 aa19.56■□□□□ 0.72
DDX39A-217ENST00000592391 TOGARAM1Q9Y4F4 1720 aa19.56■□□□□ 0.72
DDX39A-217ENST00000592391 HMOX1P09601 288 aa19.55■□□□□ 0.72
DDX39A-217ENST00000592391 DDX10Q13206 875 aaKnown RBP19.55■□□□□ 0.72
DDX39A-217ENST00000592391 SLC27A3Q5K4L6 730 aa19.55■□□□□ 0.72
DDX39A-217ENST00000592391 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-217ENST00000592391 MPRIPQ6WCQ1 1025 aa19.55■□□□□ 0.72
DDX39A-217ENST00000592391 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
DDX39A-217ENST00000592391 U2SURPO15042 1029 aaKnown RBP19.53■□□□□ 0.72
DDX39A-217ENST00000592391 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
DDX39A-217ENST00000592391 STK32BQ9NY57 414 aa19.53■□□□□ 0.72
DDX39A-217ENST00000592391 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
DDX39A-217ENST00000592391 PIGBQ92521 554 aa19.52■□□□□ 0.72
DDX39A-217ENST00000592391 DCAF5Q96JK2 942 aa19.52■□□□□ 0.72
DDX39A-217ENST00000592391 PAPPAQ13219 1627 aa19.51■□□□□ 0.71
DDX39A-217ENST00000592391 SLC15A2Q16348 729 aa19.51■□□□□ 0.71
DDX39A-217ENST00000592391 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
DDX39A-217ENST00000592391 ITGB4P16144 1822 aa19.51■□□□□ 0.71
DDX39A-217ENST00000592391 LY75O60449 1722 aa19.51■□□□□ 0.71
DDX39A-217ENST00000592391 PALLDQ8WX93 1383 aa19.5■□□□□ 0.71
DDX39A-217ENST00000592391 SMARCC1Q92922 1105 aaPredicted RBP19.5■□□□□ 0.71
DDX39A-217ENST00000592391 ERVV-2B6SEH9 535 aa19.49■□□□□ 0.71
DDX39A-217ENST00000592391 CCNL1Q9UK58 526 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-217ENST00000592391 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
DDX39A-217ENST00000592391 KDM6AO15550 1401 aaPredicted RBP19.49■□□□□ 0.71
DDX39A-217ENST00000592391 LRP5O75197 1615 aa19.48■□□□□ 0.71
DDX39A-217ENST00000592391 KCNQ4P56696 695 aa19.48■□□□□ 0.71
DDX39A-217ENST00000592391 AKAP4Q5JQC9 854 aa19.47■□□□□ 0.71
DDX39A-217ENST00000592391 RALBP1Q15311 655 aa19.46■□□□□ 0.71
DDX39A-217ENST00000592391 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
DDX39A-217ENST00000592391 MTHFSDQ2M296 383 aaKnown RBP19.46■□□□□ 0.71
DDX39A-217ENST00000592391 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
DDX39A-217ENST00000592391 ASAP1Q9ULH1 1129 aa19.45■□□□□ 0.7
DDX39A-217ENST00000592391 CABP4P57796 275 aa19.44■□□□□ 0.7
DDX39A-217ENST00000592391 PDGFDQ9GZP0 370 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-217ENST00000592391 CASZ1Q86V15 1759 aa19.43■□□□□ 0.7
DDX39A-217ENST00000592391 U2AF1L5P0DN76 240 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-217ENST00000592391 HMGB2P26583 209 aaKnown RBP19.43■□□□□ 0.7
DDX39A-217ENST00000592391 U2AF1Q01081 240 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■□□□□ 10.7
DDX39A-217ENST00000592391 RSPH6AQ9H0K4 717 aa19.43■□□□□ 0.7
DDX39A-217ENST00000592391 ATG3Q9NT62 314 aa19.43■□□□□ 0.7
DDX39A-217ENST00000592391 PRKAR2BP31323 418 aa19.42■□□□□ 0.7
DDX39A-217ENST00000592391 LOC102724428A0A0B4J2F2 783 aa19.41■□□□□ 0.7
DDX39A-217ENST00000592391 FCHSD2O94868 740 aa19.41■□□□□ 0.7
DDX39A-217ENST00000592391 SIK1P57059 783 aa19.41■□□□□ 0.7
DDX39A-217ENST00000592391 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
DDX39A-217ENST00000592391 SPON1Q9HCB6 807 aa19.41■□□□□ 0.7
DDX39A-217ENST00000592391 NFATC2IPQ8NCF5 419 aa19.4■□□□□ 0.7
DDX39A-217ENST00000592391 LGR6Q9HBX8 967 aa19.4■□□□□ 0.7
DDX39A-217ENST00000592391 TFCP2L1Q9NZI6 479 aa19.4■□□□□ 0.7
DDX39A-217ENST00000592391 C5P01031 1676 aa19.4■□□□□ 0.7
DDX39A-217ENST00000592391 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.7
DDX39A-217ENST00000592391 RNMTO43148 476 aaKnown RBP19.39■□□□□ 0.69
DDX39A-217ENST00000592391 PHACTR3Q96KR7 559 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms