RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 SEC24BO95487 1268 aa19.94■□□□□ 0.78
MBD1-227ENST00000592060 API5Q9BZZ5 524 aaKnown RBP19.94■□□□□ 0.78
MBD1-227ENST00000592060 PHRF1Q9P1Y6 1649 aaKnown RBP19.94■□□□□ 0.78
MBD1-227ENST00000592060 NUTM2GQ5VZR2 741 aa19.94■□□□□ 0.78
MBD1-227ENST00000592060 ABTB2Q8N961 1025 aa19.94■□□□□ 0.78
MBD1-227ENST00000592060 CHMP4BQ9H444 224 aaKnown RBP19.94■□□□□ 0.78
MBD1-227ENST00000592060 FOXO3O43524 673 aa19.93■□□□□ 0.78
MBD1-227ENST00000592060 KRT24Q2M2I5 525 aa19.93■□□□□ 0.78
MBD1-227ENST00000592060 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
MBD1-227ENST00000592060 GAS2L2Q8NHY3 880 aa19.92■□□□□ 0.78
MBD1-227ENST00000592060 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
MBD1-227ENST00000592060 NUCB1Q02818 461 aa19.9■□□□□ 0.78
MBD1-227ENST00000592060 NBR1Q14596 966 aa19.9■□□□□ 0.78
MBD1-227ENST00000592060 FAM208AQ9UK61 1670 aaKnown RBP19.88■□□□□ 0.77
MBD1-227ENST00000592060 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
MBD1-227ENST00000592060 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
MBD1-227ENST00000592060 C1orf115Q9H7X2 142 aa19.87■□□□□ 0.77
MBD1-227ENST00000592060 INTS3Q68E01 1043 aaKnown RBP19.86■□□□□ 0.77
MBD1-227ENST00000592060 TRPM3Q9HCF6 1732 aaPredicted RBP19.86■□□□□ 0.77
MBD1-227ENST00000592060 MSH6P52701 1360 aa19.86■□□□□ 0.77
MBD1-227ENST00000592060 SIRT2Q8IXJ6 389 aa19.86■□□□□ 0.77
MBD1-227ENST00000592060 SLIT3O75094 1523 aa19.85■□□□□ 0.77
MBD1-227ENST00000592060 SLC4A3P48751 1232 aa19.85■□□□□ 0.77
MBD1-227ENST00000592060 FBXO41Q8TF61 875 aa19.85■□□□□ 0.77
MBD1-227ENST00000592060 PTPRCP08575 1304 aa19.85■□□□□ 0.77
MBD1-227ENST00000592060 GCC1Q96CN9 775 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 TSPYL4Q9UJ04 414 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 RGPD2P0DJD1 1756 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 ESCO1Q5FWF5 840 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 C14orf37Q86TY3 774 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 CHD1LQ86WJ1 897 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 IP6K1Q92551 441 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 MAP3K5Q99683 1374 aa19.84■□□□□ 0.77
MBD1-227ENST00000592060 KIF1AQ12756 1690 aa19.83■□□□□ 0.77
MBD1-227ENST00000592060 TBC1D32Q96NH3 1257 aa19.83■□□□□ 0.77
MBD1-227ENST00000592060 GNAT3A8MTJ3 354 aa19.83■□□□□ 0.76
MBD1-227ENST00000592060 ATP10DQ9P241 1426 aa19.82■□□□□ 0.76
MBD1-227ENST00000592060 LNPKQ9C0E8 428 aa19.82■□□□□ 0.76
MBD1-227ENST00000592060 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
MBD1-227ENST00000592060 PSME1Q06323 249 aa19.81■□□□□ 0.76
MBD1-227ENST00000592060 LTV1Q96GA3 475 aaPredicted RBP19.81■□□□□ 0.76
MBD1-227ENST00000592060 DAXXQ9UER7 740 aaPredicted RBP19.81■□□□□ 0.76
MBD1-227ENST00000592060 N4BP2Q86UW6 1770 aaPredicted RBP19.81■□□□□ 0.76
MBD1-227ENST00000592060 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
MBD1-227ENST00000592060 LMO7Q8WWI1 1683 aa19.8■□□□□ 0.76
MBD1-227ENST00000592060 CACNA1FO60840 1977 aa19.8■□□□□ 0.76
MBD1-227ENST00000592060 CAMTA1Q9Y6Y1 1673 aa19.79■□□□□ 0.76
MBD1-227ENST00000592060 KCNH5Q8NCM2 988 aa19.79■□□□□ 0.76
MBD1-227ENST00000592060 ORAI2Q96SN7 254 aa19.79■□□□□ 0.76
MBD1-227ENST00000592060 NCAPD2Q15021 1401 aa19.78■□□□□ 0.76
MBD1-227ENST00000592060 USHBP1Q8N6Y0 703 aa19.78■□□□□ 0.76
MBD1-227ENST00000592060 IL17REQ8NFR9 667 aa19.78■□□□□ 0.76
MBD1-227ENST00000592060 SLC4A2P04920 1241 aa19.77■□□□□ 0.76
MBD1-227ENST00000592060 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
MBD1-227ENST00000592060 KDM3BQ7LBC6 1761 aa19.77■□□□□ 0.76
MBD1-227ENST00000592060 ANKRD45Q5TZF3 282 aa19.77■□□□□ 0.75
MBD1-227ENST00000592060 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
MBD1-227ENST00000592060 C1orf167Q5SNV9 1468 aa19.76■□□□□ 0.75
MBD1-227ENST00000592060 ALS2Q96Q42 1657 aa19.76■□□□□ 0.75
MBD1-227ENST00000592060 MST1RQ04912 1400 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 SOS1Q07889 1333 aaPredicted RBP19.75■□□□□ 0.75
MBD1-227ENST00000592060 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 G2E3Q7L622 706 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 ANKRD44Q8N8A2 993 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 CEMIPQ8WUJ3 1361 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 STRCP1A6NGW2 1772 aa19.75■□□□□ 0.75
MBD1-227ENST00000592060 BMP2KLQ5H9B9 411 aa19.74■□□□□ 0.75
MBD1-227ENST00000592060 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
MBD1-227ENST00000592060 DCTPP1Q9H773 170 aa19.74■□□□□ 0.75
MBD1-227ENST00000592060 TAF7Q15545 349 aaPredicted RBP19.73■□□□□ 0.75
MBD1-227ENST00000592060 CEP85Q6P2H3 762 aa19.73■□□□□ 0.75
MBD1-227ENST00000592060 ARHGEF25Q86VW2 580 aa19.73■□□□□ 0.75
MBD1-227ENST00000592060 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
MBD1-227ENST00000592060 BECN1Q14457 450 aa19.72■□□□□ 0.75
MBD1-227ENST00000592060 RPAP2Q8IXW5 612 aaPredicted RBP19.72■□□□□ 0.75
MBD1-227ENST00000592060 MEIS3Q99687 375 aa19.72■□□□□ 0.75
MBD1-227ENST00000592060 GCP02774 474 aa19.72■□□□□ 0.75
MBD1-227ENST00000592060 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
MBD1-227ENST00000592060 MFAP1P55081 439 aaKnown RBP19.71■□□□□ 0.75
MBD1-227ENST00000592060 CCT4P50991 539 aaKnown RBP19.7■□□□□ 0.74
MBD1-227ENST00000592060 CCDC30Q5VVM6 783 aa19.7■□□□□ 0.74
MBD1-227ENST00000592060 STK31Q9BXU1 1019 aa19.7■□□□□ 0.74
MBD1-227ENST00000592060 C22orf23Q9BZE7 217 aa19.7■□□□□ 0.74
MBD1-227ENST00000592060 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
MBD1-227ENST00000592060 PXDNLA1KZ92 1463 aa19.69■□□□□ 0.74
MBD1-227ENST00000592060 F6X3S4 739 aa19.69■□□□□ 0.74
MBD1-227ENST00000592060 LRRC59Q96AG4 307 aaKnown RBP19.69■□□□□ 0.74
MBD1-227ENST00000592060 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
MBD1-227ENST00000592060 ZBTB7CA1YPR0 619 aa19.68■□□□□ 0.74
MBD1-227ENST00000592060 FLIIQ13045 1269 aa19.68■□□□□ 0.74
MBD1-227ENST00000592060 KRT28Q7Z3Y7 464 aa19.68■□□□□ 0.74
MBD1-227ENST00000592060 PXDNQ92626 1479 aa19.68■□□□□ 0.74
MBD1-227ENST00000592060 DCCP43146 1447 aa19.67■□□□□ 0.74
MBD1-227ENST00000592060 DEKP35659 375 aaKnown RBP19.67■□□□□ 0.74
MBD1-227ENST00000592060 LMTK3Q96Q04 1460 aa19.67■□□□□ 0.74
MBD1-227ENST00000592060 NFKBIBQ15653 356 aa19.66■□□□□ 0.74
MBD1-227ENST00000592060 TBC1D2Q9BYX2 928 aa19.66■□□□□ 0.74
MBD1-227ENST00000592060 OVOS2A0A0G2JMS6 1433 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms