RNA–Protein interactions for RNA: ENST00000591956.1

SNHG16-208, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 2

Gene SNHG16, Length 556 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-208ENST00000591956 ZNF316A6NFI3 1004 aaPredicted RBP15.37■□□□□ 0.05
SNHG16-208ENST00000591956 DDX10Q13206 875 aaKnown RBP15.37■□□□□ 0.05
SNHG16-208ENST00000591956 RALBP1Q15311 655 aa15.37■□□□□ 0.05
SNHG16-208ENST00000591956 EZH2Q15910 746 aaKnown RBP15.37■□□□□ 0.05
SNHG16-208ENST00000591956 BCL11BQ9C0K0 894 aaPredicted RBP15.37■□□□□ 0.05
SNHG16-208ENST00000591956 R3HDM1Q15032 1099 aaKnown RBP15.36■□□□□ 0.05
SNHG16-208ENST00000591956 PLSCR1O15162 318 aa15.35■□□□□ 0.05
SNHG16-208ENST00000591956 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
SNHG16-208ENST00000591956 APBA3O96018 575 aa15.35■□□□□ 0.05
SNHG16-208ENST00000591956 KDRP35968 1356 aa15.35■□□□□ 0.05
SNHG16-208ENST00000591956 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
SNHG16-208ENST00000591956 PPP2R1AP30153 589 aa15.34■□□□□ 0.05
SNHG16-208ENST00000591956 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
SNHG16-208ENST00000591956 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
SNHG16-208ENST00000591956 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
SNHG16-208ENST00000591956 SPG7Q9UQ90 795 aa15.34■□□□□ 0.05
SNHG16-208ENST00000591956 LRP5O75197 1615 aa15.33■□□□□ 0.04
SNHG16-208ENST00000591956 CAMKK2Q96RR4 588 aa15.33■□□□□ 0.04
SNHG16-208ENST00000591956 SBF2Q86WG5 1849 aa15.33■□□□□ 0.04
SNHG16-208ENST00000591956 USHBP1Q8N6Y0 703 aa15.32■□□□□ 0.04
SNHG16-208ENST00000591956 DDX54Q8TDD1 881 aaKnown RBP15.32■□□□□ 0.04
SNHG16-208ENST00000591956 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
SNHG16-208ENST00000591956 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
SNHG16-208ENST00000591956 MEGF6O75095 1541 aa15.32■□□□□ 0.04
SNHG16-208ENST00000591956 PLEKHO1Q53GL0 409 aaPredicted RBP15.3■□□□□ 0.04
SNHG16-208ENST00000591956 NUDCQ9Y266 331 aa15.3■□□□□ 0.04
SNHG16-208ENST00000591956 CYP27B1O15528 508 aa15.29■□□□□ 0.04
SNHG16-208ENST00000591956 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
SNHG16-208ENST00000591956 SULT6B1Q6IMI4 303 aa15.29■□□□□ 0.04
SNHG16-208ENST00000591956 IFNL2Q8IZJ0 200 aa15.29■□□□□ 0.04
SNHG16-208ENST00000591956 PKD1L3Q7Z443 1732 aa15.29■□□□□ 0.04
SNHG16-208ENST00000591956 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.04
SNHG16-208ENST00000591956 SHANK3Q9BYB0 1731 aa15.27■□□□□ 0.04
SNHG16-208ENST00000591956 HSP90AB1P08238 724 aaKnown RBP15.27■□□□□ 0.04
SNHG16-208ENST00000591956 KAT6BQ8WYB5 2073 aa15.26■□□□□ 0.03
SNHG16-208ENST00000591956 FCHSD2O94868 740 aa15.26■□□□□ 0.03
SNHG16-208ENST00000591956 PHKG2P15735 406 aa15.26■□□□□ 0.03
SNHG16-208ENST00000591956 RGPD3A6NKT7 1758 aaPredicted RBP15.26■□□□□ 0.03
SNHG16-208ENST00000591956 RGPD4Q7Z3J3 1758 aa15.26■□□□□ 0.03
SNHG16-208ENST00000591956 KCNQ2O43526 872 aa15.25■□□□□ 0.03
SNHG16-208ENST00000591956 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
SNHG16-208ENST00000591956 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
SNHG16-208ENST00000591956 RREB1Q92766 1687 aa15.25■□□□□ 0.03
SNHG16-208ENST00000591956 MYBBP1AQ9BQG0 1328 aaKnown RBP15.24■□□□□ 0.03
SNHG16-208ENST00000591956 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
SNHG16-208ENST00000591956 ERVV-2B6SEH9 535 aa15.24■□□□□ 0.03
SNHG16-208ENST00000591956 PRIM1P49642 420 aaKnown RBP15.24■□□□□ 0.03
SNHG16-208ENST00000591956 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
SNHG16-208ENST00000591956 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
SNHG16-208ENST00000591956 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
SNHG16-208ENST00000591956 NHSQ6T4R5 1651 aa15.24■□□□□ 0.03
SNHG16-208ENST00000591956 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
SNHG16-208ENST00000591956 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
SNHG16-208ENST00000591956 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
SNHG16-208ENST00000591956 PROM2Q8N271 834 aa15.22■□□□□ 0.03
SNHG16-208ENST00000591956 ACSBG1Q96GR2 724 aa15.22■□□□□ 0.03
SNHG16-208ENST00000591956 HMOX1P09601 288 aa15.21■□□□□ 0.03
SNHG16-208ENST00000591956 AKAP4Q5JQC9 854 aa15.21■□□□□ 0.03
SNHG16-208ENST00000591956 SLC27A3Q5K4L6 730 aa15.21■□□□□ 0.03
SNHG16-208ENST00000591956 C1orf141Q5JVX7 400 aa15.2■□□□□ 0.02
SNHG16-208ENST00000591956 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
SNHG16-208ENST00000591956 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■□□□□ 9.2
SNHG16-208ENST00000591956 ZNF530Q6P9A1 599 aaPredicted RBP15.19■□□□□ 0.02
SNHG16-208ENST00000591956 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
SNHG16-208ENST00000591956 RSPH6AQ9H0K4 717 aa15.19■□□□□ 0.02
SNHG16-208ENST00000591956 BTAF1O14981 1849 aa15.18■□□□□ 0.02
SNHG16-208ENST00000591956 TXNRD1Q16881 649 aa15.18■□□□□ 0.02
SNHG16-208ENST00000591956 GAS2L2Q8NHY3 880 aa15.18■□□□□ 0.02
SNHG16-208ENST00000591956 MTHFSDQ2M296 383 aaKnown RBP15.17■□□□□ 0.02
SNHG16-208ENST00000591956 PIGBQ92521 554 aa15.17■□□□□ 0.02
SNHG16-208ENST00000591956 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
SNHG16-208ENST00000591956 ITGB4P16144 1822 aa15.16■□□□□ 0.02
SNHG16-208ENST00000591956 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
SNHG16-208ENST00000591956 MPRIPQ6WCQ1 1025 aa15.16■□□□□ 0.02
SNHG16-208ENST00000591956 TMOD3Q9NYL9 352 aa15.16■□□□□ 0.02
SNHG16-208ENST00000591956 DOT1LQ8TEK3 1739 aa15.15■□□□□ 0.02
SNHG16-208ENST00000591956 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
SNHG16-208ENST00000591956 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
SNHG16-208ENST00000591956 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
SNHG16-208ENST00000591956 SPON1Q9HCB6 807 aa15.15■□□□□ 0.02
SNHG16-208ENST00000591956 GNAT3A8MTJ3 354 aa15.14■□□□□ 0.01
SNHG16-208ENST00000591956 NEFMP07197 916 aa15.14■□□□□ 0.01
SNHG16-208ENST00000591956 PPP1R1BQ9UD71 204 aaPredicted RBP15.14■□□□□ 0.01
SNHG16-208ENST00000591956 RNMTO43148 476 aaKnown RBP15.13■□□□□ 0.01
SNHG16-208ENST00000591956 ANP32CO43423 234 aa15.13■□□□□ 0.01
SNHG16-208ENST00000591956 CABP4P57796 275 aa15.13■□□□□ 0.01
SNHG16-208ENST00000591956 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
SNHG16-208ENST00000591956 LY75O60449 1722 aa15.12■□□□□ 0.01
SNHG16-208ENST00000591956 SCN11AQ9UI33 1791 aa15.12■□□□□ 0.01
SNHG16-208ENST00000591956 NFATC2IPQ8NCF5 419 aa15.12■□□□□ 0.01
SNHG16-208ENST00000591956 ADAMTS7Q9UKP4 1686 aa15.12■□□□□ 0.01
SNHG16-208ENST00000591956 TOGARAM1Q9Y4F4 1720 aa15.12■□□□□ 0.01
SNHG16-208ENST00000591956 KDM6AO15550 1401 aaPredicted RBP15.11■□□□□ 0.01
SNHG16-208ENST00000591956 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
SNHG16-208ENST00000591956 LGR6Q9HBX8 967 aa15.11■□□□□ 0.01
SNHG16-208ENST00000591956 LRRC4BQ9NT99 713 aa15.11■□□□□ 0.01
SNHG16-208ENST00000591956 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
SNHG16-208ENST00000591956 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
SNHG16-208ENST00000591956 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
SNHG16-208ENST00000591956 ATG3Q9NT62 314 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 672.3 ms