RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 DDX10Q13206 875 aaKnown RBP19.79■□□□□ 0.76
CXXC1-213ENST00000590234 APBA3O96018 575 aa19.78■□□□□ 0.76
CXXC1-213ENST00000590234 PKD1L3Q7Z443 1732 aa19.78■□□□□ 0.76
CXXC1-213ENST00000590234 IL13P35225 146 aa19.77■□□□□ 0.76
CXXC1-213ENST00000590234 NHSQ6T4R5 1651 aa19.77■□□□□ 0.76
CXXC1-213ENST00000590234 EN1Q05925 392 aaPredicted RBP19.76■□□□□ 0.75
CXXC1-213ENST00000590234 BCL11BQ9C0K0 894 aaPredicted RBP19.76■□□□□ 0.75
CXXC1-213ENST00000590234 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
CXXC1-213ENST00000590234 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
CXXC1-213ENST00000590234 ACSBG1Q96GR2 724 aa19.75■□□□□ 0.75
CXXC1-213ENST00000590234 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
CXXC1-213ENST00000590234 PLEKHG2Q9H7P9 1386 aa19.74■□□□□ 0.75
CXXC1-213ENST00000590234 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
CXXC1-213ENST00000590234 PPP2R1AP30153 589 aa19.74■□□□□ 0.75
CXXC1-213ENST00000590234 PARD3Q8TEW0 1356 aa19.73■□□□□ 0.75
CXXC1-213ENST00000590234 PTF1AQ7RTS3 328 aa19.73■□□□□ 0.75
CXXC1-213ENST00000590234 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
CXXC1-213ENST00000590234 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
CXXC1-213ENST00000590234 KCNQ2O43526 872 aa19.72■□□□□ 0.75
CXXC1-213ENST00000590234 EZH2Q15910 746 aaKnown RBP19.72■□□□□ 0.75
CXXC1-213ENST00000590234 AEBP1Q8IUX7 1158 aa19.72■□□□□ 0.75
CXXC1-213ENST00000590234 CFAP53Q96M91 514 aa19.72■□□□□ 0.75
CXXC1-213ENST00000590234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.75
CXXC1-213ENST00000590234 RGPD3A6NKT7 1758 aaPredicted RBP19.72■□□□□ 0.75
CXXC1-213ENST00000590234 RGPD4Q7Z3J3 1758 aa19.72■□□□□ 0.75
CXXC1-213ENST00000590234 KDRP35968 1356 aa19.71■□□□□ 0.75
CXXC1-213ENST00000590234 SULT6B1Q6IMI4 303 aa19.71■□□□□ 0.75
CXXC1-213ENST00000590234 CAMKK2Q96RR4 588 aa19.71■□□□□ 0.75
CXXC1-213ENST00000590234 CYP27B1O15528 508 aa19.7■□□□□ 0.74
CXXC1-213ENST00000590234 RREB1Q92766 1687 aa19.69■□□□□ 0.74
CXXC1-213ENST00000590234 KAT6BQ8WYB5 2073 aa19.69■□□□□ 0.74
CXXC1-213ENST00000590234 BTAF1O14981 1849 aa19.68■□□□□ 0.74
CXXC1-213ENST00000590234 ZNF316A6NFI3 1004 aaPredicted RBP19.68■□□□□ 0.74
CXXC1-213ENST00000590234 PLSCR1O15162 318 aa19.68■□□□□ 0.74
CXXC1-213ENST00000590234 PLEKHO1Q53GL0 409 aaPredicted RBP19.67■□□□□ 0.74
CXXC1-213ENST00000590234 SYTL4Q96C24 671 aaPredicted RBP19.67■□□□□ 0.74
CXXC1-213ENST00000590234 U2SURPO15042 1029 aaKnown RBP19.66■□□□□ 0.74
CXXC1-213ENST00000590234 HMOX1P09601 288 aa19.66■□□□□ 0.74
CXXC1-213ENST00000590234 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
CXXC1-213ENST00000590234 RALBP1Q15311 655 aa19.66■□□□□ 0.74
CXXC1-213ENST00000590234 AMOTQ4VCS5 1084 aa19.66■□□□□ 0.74
CXXC1-213ENST00000590234 IFNL2Q8IZJ0 200 aa19.66■□□□□ 0.74
CXXC1-213ENST00000590234 NUP188Q5SRE5 1749 aa19.65■□□□□ 0.74
CXXC1-213ENST00000590234 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
CXXC1-213ENST00000590234 PHKG2P15735 406 aa19.65■□□□□ 0.74
CXXC1-213ENST00000590234 NKX1-1Q15270 411 aaPredicted RBP19.64■□□□□ 0.73
CXXC1-213ENST00000590234 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
CXXC1-213ENST00000590234 NUDCQ9Y266 331 aa19.63■□□□□ 0.73
CXXC1-213ENST00000590234 ITGB4P16144 1822 aa19.6■□□□□ 0.73
CXXC1-213ENST00000590234 HSP90AB1P08238 724 aaKnown RBP19.6■□□□□ 0.73
CXXC1-213ENST00000590234 TXNRD1Q16881 649 aa19.6■□□□□ 0.73
CXXC1-213ENST00000590234 C1orf141Q5JVX7 400 aa19.6■□□□□ 0.73
CXXC1-213ENST00000590234 MYBBP1AQ9BQG0 1328 aaKnown RBP19.59■□□□□ 0.73
CXXC1-213ENST00000590234 MPRIPQ6WCQ1 1025 aa19.59■□□□□ 0.73
CXXC1-213ENST00000590234 PROM2Q8N271 834 aa19.59■□□□□ 0.73
CXXC1-213ENST00000590234 U2AF1L5P0DN76 240 aaPredicted RBP19.58■□□□□ 0.72
CXXC1-213ENST00000590234 U2AF1Q01081 240 aaKnown RBP eCLIP19.58■□□□□ 0.72
CXXC1-213ENST00000590234 NBPF14Q5TI25 921 aa19.58■□□□□ 0.72
CXXC1-213ENST00000590234 DCAF5Q96JK2 942 aa19.57■□□□□ 0.72
CXXC1-213ENST00000590234 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
CXXC1-213ENST00000590234 TMOD3Q9NYL9 352 aa19.56■□□□□ 0.72
CXXC1-213ENST00000590234 KDM6AO15550 1401 aaPredicted RBP19.56■□□□□ 0.72
CXXC1-213ENST00000590234 LY75O60449 1722 aa19.56■□□□□ 0.72
CXXC1-213ENST00000590234 PSDA5PKW4 1024 aaPredicted RBP19.55■□□□□ 0.72
CXXC1-213ENST00000590234 PRKAR2BP31323 418 aa19.55■□□□□ 0.72
CXXC1-213ENST00000590234 MTHFSDQ2M296 383 aaKnown RBP19.55■□□□□ 0.72
CXXC1-213ENST00000590234 AKAP4Q5JQC9 854 aa19.55■□□□□ 0.72
CXXC1-213ENST00000590234 RSPH6AQ9H0K4 717 aa19.55■□□□□ 0.72
CXXC1-213ENST00000590234 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
CXXC1-213ENST00000590234 PIGBQ92521 554 aa19.54■□□□□ 0.72
CXXC1-213ENST00000590234 ERVV-2B6SEH9 535 aa19.53■□□□□ 0.72
CXXC1-213ENST00000590234 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
CXXC1-213ENST00000590234 PALLDQ8WX93 1383 aa19.53■□□□□ 0.72
CXXC1-213ENST00000590234 SCN11AQ9UI33 1791 aa19.52■□□□□ 0.72
CXXC1-213ENST00000590234 PAPPAQ13219 1627 aa19.52■□□□□ 0.72
CXXC1-213ENST00000590234 FCHSD2O94868 740 aa19.52■□□□□ 0.72
CXXC1-213ENST00000590234 GAS2L2Q8NHY3 880 aa19.52■□□□□ 0.72
CXXC1-213ENST00000590234 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
CXXC1-213ENST00000590234 SMARCC1Q92922 1105 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-213ENST00000590234 LRRC4BQ9NT99 713 aa19.51■□□□□ 0.71
CXXC1-213ENST00000590234 CABP4P57796 275 aa19.5■□□□□ 0.71
CXXC1-213ENST00000590234 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
CXXC1-213ENST00000590234 CCNL1Q9UK58 526 aaPredicted RBP19.5■□□□□ 0.71
CXXC1-213ENST00000590234 VIRMAQ69YN4 1812 aaKnown RBP19.49■□□□□ 0.71
CXXC1-213ENST00000590234 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
CXXC1-213ENST00000590234 ADAMTS7Q9UKP4 1686 aa19.49■□□□□ 0.71
CXXC1-213ENST00000590234 MAP3K5Q99683 1374 aa19.48■□□□□ 0.71
CXXC1-213ENST00000590234 RNMTO43148 476 aaKnown RBP19.47■□□□□ 0.71
CXXC1-213ENST00000590234 KCNQ4P56696 695 aa19.47■□□□□ 0.71
CXXC1-213ENST00000590234 SLC15A2Q16348 729 aa19.47■□□□□ 0.71
CXXC1-213ENST00000590234 LGR6Q9HBX8 967 aa19.47■□□□□ 0.71
CXXC1-213ENST00000590234 ASAP1Q9ULH1 1129 aa19.47■□□□□ 0.71
CXXC1-213ENST00000590234 MRC1P22897 1456 aa19.47■□□□□ 0.71
CXXC1-213ENST00000590234 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
CXXC1-213ENST00000590234 NEFMP07197 916 aa19.46■□□□□ 0.71
CXXC1-213ENST00000590234 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
CXXC1-213ENST00000590234 ATG3Q9NT62 314 aa19.46■□□□□ 0.71
CXXC1-213ENST00000590234 C5P01031 1676 aa19.46■□□□□ 0.71
CXXC1-213ENST00000590234 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
CXXC1-213ENST00000590234 SLC52A2Q9HAB3 445 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms