RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
APOC1-205ENST00000589781 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
APOC1-205ENST00000589781 PDE3BQ13370 1112 aa13.46□□□□□ -0.25
APOC1-205ENST00000589781 LTV1Q96GA3 475 aaPredicted RBP13.46□□□□□ -0.25
APOC1-205ENST00000589781 CAMKK2Q96RR4 588 aa13.46□□□□□ -0.25
APOC1-205ENST00000589781 NLRP2Q9NX02 1062 aa13.46□□□□□ -0.25
APOC1-205ENST00000589781 FAM208AQ9UK61 1670 aaKnown RBP13.45□□□□□ -0.26
APOC1-205ENST00000589781 DDB1Q16531 1140 aa13.45□□□□□ -0.26
APOC1-205ENST00000589781 HSP90AB2PQ58FF8 381 aa13.45□□□□□ -0.26
APOC1-205ENST00000589781 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
APOC1-205ENST00000589781 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
APOC1-205ENST00000589781 EZH2Q15910 746 aaKnown RBP13.44□□□□□ -0.26
APOC1-205ENST00000589781 RUNDC1Q96C34 613 aa13.44□□□□□ -0.26
APOC1-205ENST00000589781 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
APOC1-205ENST00000589781 AMPHP49418 695 aa13.43□□□□□ -0.26
APOC1-205ENST00000589781 CDCA7LQ96GN5 454 aa13.43□□□□□ -0.26
APOC1-205ENST00000589781 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
APOC1-205ENST00000589781 RGPD2P0DJD1 1756 aa13.43□□□□□ -0.26
APOC1-205ENST00000589781 OVOS2A0A0G2JMS6 1433 aa13.42□□□□□ -0.26
APOC1-205ENST00000589781 BCL9O00512 1426 aa13.42□□□□□ -0.26
APOC1-205ENST00000589781 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
APOC1-205ENST00000589781 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
APOC1-205ENST00000589781 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
APOC1-205ENST00000589781 RRP7AQ9Y3A4 280 aaKnown RBP13.42□□□□□ -0.26
APOC1-205ENST00000589781 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 MEGF6O75095 1541 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 KCNQ2O43526 872 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 APBA3O96018 575 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 IL2RBP14784 551 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 IL13P35225 146 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 BAG6P46379 1132 aa13.41□□□□□ -0.26
APOC1-205ENST00000589781 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
APOC1-205ENST00000589781 EXOC5O00471 708 aa13.4□□□□□ -0.26
APOC1-205ENST00000589781 SF3B2Q13435 895 aaKnown RBP13.4□□□□□ -0.26
APOC1-205ENST00000589781 PROM2Q8N271 834 aa13.4□□□□□ -0.26
APOC1-205ENST00000589781 FLT4P35916 1363 aa13.4□□□□□ -0.26
APOC1-205ENST00000589781 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 HMOX1P09601 288 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
APOC1-205ENST00000589781 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 PLEKHF1Q96S99 279 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
APOC1-205ENST00000589781 NEFLP07196 543 aa13.38□□□□□ -0.27
APOC1-205ENST00000589781 PRKAR2BP31323 418 aa13.38□□□□□ -0.27
APOC1-205ENST00000589781 KIF24Q5T7B8 1368 aa13.37□□□□□ -0.27
APOC1-205ENST00000589781 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
APOC1-205ENST00000589781 PSDA5PKW4 1024 aaPredicted RBP13.37□□□□□ -0.27
APOC1-205ENST00000589781 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
APOC1-205ENST00000589781 RREB1Q92766 1687 aa13.37□□□□□ -0.27
APOC1-205ENST00000589781 IRX6P78412 446 aaPredicted RBP13.36□□□□□ -0.27
APOC1-205ENST00000589781 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
APOC1-205ENST00000589781 FKBP8Q14318 412 aa13.36□□□□□ -0.27
APOC1-205ENST00000589781 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
APOC1-205ENST00000589781 WWC1Q8IX03 1113 aa13.35□□□□□ -0.27
APOC1-205ENST00000589781 NGEFQ8N5V2 710 aa13.35□□□□□ -0.27
APOC1-205ENST00000589781 EYA1Q99502 592 aa13.35□□□□□ -0.27
APOC1-205ENST00000589781 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
APOC1-205ENST00000589781 NUP188Q5SRE5 1749 aa13.34□□□□□ -0.27
APOC1-205ENST00000589781 PLSCR1O15162 318 aa13.34□□□□□ -0.27
APOC1-205ENST00000589781 FCHSD2O94868 740 aa13.34□□□□□ -0.27
APOC1-205ENST00000589781 TMPOP42166 694 aaKnown RBP13.34□□□□□ -0.27
APOC1-205ENST00000589781 DUSP27Q5VZP5 1158 aa13.34□□□□□ -0.27
APOC1-205ENST00000589781 AEBP1Q8IUX7 1158 aa13.34□□□□□ -0.27
APOC1-205ENST00000589781 SLFN5Q08AF3 891 aa13.33□□□□□ -0.28
APOC1-205ENST00000589781 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
APOC1-205ENST00000589781 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
APOC1-205ENST00000589781 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
APOC1-205ENST00000589781 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
APOC1-205ENST00000589781 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
APOC1-205ENST00000589781 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
APOC1-205ENST00000589781 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
APOC1-205ENST00000589781 E9PSI1 815 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 CYP27B1O15528 508 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 SULT6B1Q6IMI4 303 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 PHACTR3Q96KR7 559 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
APOC1-205ENST00000589781 NEFMP07197 916 aa13.3□□□□□ -0.28
APOC1-205ENST00000589781 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
APOC1-205ENST00000589781 TRMT2AQ8IZ69 625 aaKnown RBP13.3□□□□□ -0.28
APOC1-205ENST00000589781 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
APOC1-205ENST00000589781 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
APOC1-205ENST00000589781 SRCAPQ6ZRS2 3230 aa13.3□□□□□ -0.28
APOC1-205ENST00000589781 RNF123Q5XPI4 1314 aa13.3□□□□□ -0.28
APOC1-205ENST00000589781 PRIM1P49642 420 aaKnown RBP13.29□□□□□ -0.28
APOC1-205ENST00000589781 RIPK4P57078 832 aa13.29□□□□□ -0.28
APOC1-205ENST00000589781 TXNRD1Q16881 649 aa13.29□□□□□ -0.28
APOC1-205ENST00000589781 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
APOC1-205ENST00000589781 LRRC4BQ9NT99 713 aa13.29□□□□□ -0.28
APOC1-205ENST00000589781 RGPD3A6NKT7 1758 aaPredicted RBP13.28□□□□□ -0.28
APOC1-205ENST00000589781 RGPD4Q7Z3J3 1758 aa13.28□□□□□ -0.28
APOC1-205ENST00000589781 RRP1P56182 461 aaKnown RBP13.28□□□□□ -0.28
APOC1-205ENST00000589781 WDR63Q8IWG1 891 aa13.28□□□□□ -0.28
APOC1-205ENST00000589781 KDRP35968 1356 aa13.28□□□□□ -0.28
APOC1-205ENST00000589781 TATP17735 454 aaPredicted RBP13.27□□□□□ -0.29
APOC1-205ENST00000589781 KCNQ4P56696 695 aa13.27□□□□□ -0.29
APOC1-205ENST00000589781 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
APOC1-205ENST00000589781 PKD1L3Q7Z443 1732 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms