RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 CCDC125Q86Z20 511 aa30.06■■■□□ 2.4
R3HDM4-205ENST00000589445 NUDCQ9Y266 331 aa30.06■■■□□ 2.4
R3HDM4-205ENST00000589445 HMOX1P09601 288 aa30.05■■■□□ 2.4
R3HDM4-205ENST00000589445 DIEXFQ68CQ4 756 aaKnown RBP30.05■■■□□ 2.4
R3HDM4-205ENST00000589445 KDRP35968 1356 aa30.03■■■□□ 2.4
R3HDM4-205ENST00000589445 PDE3BQ13370 1112 aa30.02■■■□□ 2.4
R3HDM4-205ENST00000589445 KRT27Q7Z3Y8 459 aa30.02■■■□□ 2.4
R3HDM4-205ENST00000589445 U2AF1L5P0DN76 240 aaPredicted RBP30.01■■■□□ 2.39
R3HDM4-205ENST00000589445 U2AF1Q01081 240 aaKnown RBP eCLIP30.01■■■□□ 2.39
R3HDM4-205ENST00000589445 EP400Q96L91 3159 aa30.01■■■□□ 2.39
R3HDM4-205ENST00000589445 EXOC5O00471 708 aa29.99■■■□□ 2.39
R3HDM4-205ENST00000589445 DOT1LQ8TEK3 1739 aa29.99■■■□□ 2.39
R3HDM4-205ENST00000589445 FAM182BQ5T319 152 aa29.97■■■□□ 2.39
R3HDM4-205ENST00000589445 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
R3HDM4-205ENST00000589445 ZCRB1Q8TBF4 217 aaKnown RBP29.95■■■□□ 2.39
R3HDM4-205ENST00000589445 MRS2Q9HD23 443 aa29.94■■■□□ 2.38
R3HDM4-205ENST00000589445 SBF2Q86WG5 1849 aa29.94■■■□□ 2.38
R3HDM4-205ENST00000589445 PCDH11XQ9BZA7 1347 aa29.94■■■□□ 2.38
R3HDM4-205ENST00000589445 PCDH11YQ9BZA8 1340 aa29.94■■■□□ 2.38
R3HDM4-205ENST00000589445 DDX54Q8TDD1 881 aaKnown RBP29.93■■■□□ 2.38
R3HDM4-205ENST00000589445 PLEKHG2Q9H7P9 1386 aa29.92■■■□□ 2.38
R3HDM4-205ENST00000589445 VIRMAQ69YN4 1812 aaKnown RBP29.92■■■□□ 2.38
R3HDM4-205ENST00000589445 CCDC184Q52MB2 194 aa29.92■■■□□ 2.38
R3HDM4-205ENST00000589445 SPG7Q9UQ90 795 aa29.92■■■□□ 2.38
R3HDM4-205ENST00000589445 PRKAR2BP31323 418 aa29.91■■■□□ 2.38
R3HDM4-205ENST00000589445 MARCH10Q8NA82 808 aaPredicted RBP29.9■■■□□ 2.38
R3HDM4-205ENST00000589445 RSPH6AQ9H0K4 717 aa29.9■■■□□ 2.38
R3HDM4-205ENST00000589445 TOGARAM1Q9Y4F4 1720 aa29.9■■■□□ 2.38
R3HDM4-205ENST00000589445 NHSQ6T4R5 1651 aa29.89■■■□□ 2.38
R3HDM4-205ENST00000589445 TNS1Q9HBL0 1735 aaKnown RBP29.88■■■□□ 2.37
R3HDM4-205ENST00000589445 PLEKHO1Q53GL0 409 aaPredicted RBP29.87■■■□□ 2.37
R3HDM4-205ENST00000589445 ZNF530Q6P9A1 599 aaPredicted RBP29.87■■■□□ 2.37
R3HDM4-205ENST00000589445 KAT6BQ8WYB5 2073 aa29.87■■■□□ 2.37
R3HDM4-205ENST00000589445 LRP5O75197 1615 aa29.86■■■□□ 2.37
R3HDM4-205ENST00000589445 AMOTQ4VCS5 1084 aa29.85■■■□□ 2.37
R3HDM4-205ENST00000589445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.85■■■□□ 2.37
R3HDM4-205ENST00000589445 DLG5Q8TDM6 1919 aa29.84■■■□□ 2.37
R3HDM4-205ENST00000589445 CYP27B1O15528 508 aa29.83■■■□□ 2.37
R3HDM4-205ENST00000589445 FCHSD2O94868 740 aa29.83■■■□□ 2.37
R3HDM4-205ENST00000589445 NEFMP07197 916 aa29.83■■■□□ 2.37
R3HDM4-205ENST00000589445 MAPK8IP3Q9UPT6 1336 aa29.82■■■□□ 2.36
R3HDM4-205ENST00000589445 C1orf141Q5JVX7 400 aa29.82■■■□□ 2.36
R3HDM4-205ENST00000589445 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
R3HDM4-205ENST00000589445 ITGB4P16144 1822 aa29.82■■■□□ 2.36
R3HDM4-205ENST00000589445 SCN11AQ9UI33 1791 aa29.82■■■□□ 2.36
R3HDM4-205ENST00000589445 BTAF1O14981 1849 aa29.8■■■□□ 2.36
R3HDM4-205ENST00000589445 PHKG2P15735 406 aa29.79■■■□□ 2.36
R3HDM4-205ENST00000589445 CCDC146Q8IYE0 955 aa29.79■■■□□ 2.36
R3HDM4-205ENST00000589445 IFNL2Q8IZJ0 200 aa29.79■■■□□ 2.36
R3HDM4-205ENST00000589445 MTHFSDQ2M296 383 aaKnown RBP29.78■■■□□ 2.36
R3HDM4-205ENST00000589445 MIER1Q8N108 512 aa29.78■■■□□ 2.36
R3HDM4-205ENST00000589445 PNNQ9H307 717 aaKnown RBP29.78■■■□□ 2.36
R3HDM4-205ENST00000589445 BCL9O00512 1426 aa29.78■■■□□ 2.36
R3HDM4-205ENST00000589445 GAS2L2Q8NHY3 880 aa29.77■■■□□ 2.36
R3HDM4-205ENST00000589445 ACSBG1Q96GR2 724 aa29.77■■■□□ 2.36
R3HDM4-205ENST00000589445 PHACTR3Q96KR7 559 aa29.77■■■□□ 2.36
R3HDM4-205ENST00000589445 ADAMTS8Q9UP79 889 aa29.77■■■□□ 2.36
R3HDM4-205ENST00000589445 SF3B2Q13435 895 aaKnown RBP29.76■■■□□ 2.35
R3HDM4-205ENST00000589445 KDM6AO15550 1401 aaPredicted RBP29.75■■■□□ 2.35
R3HDM4-205ENST00000589445 TRIM37O94972 964 aa29.75■■■□□ 2.35
R3HDM4-205ENST00000589445 DEFB132Q7Z7B7 95 aa29.75■■■□□ 2.35
R3HDM4-205ENST00000589445 MAP3K5Q99683 1374 aa29.75■■■□□ 2.35
R3HDM4-205ENST00000589445 SYTL4Q96C24 671 aaPredicted RBP29.74■■■□□ 2.35
R3HDM4-205ENST00000589445 ADAMTS7Q9UKP4 1686 aa29.73■■■□□ 2.35
R3HDM4-205ENST00000589445 CCER2I3L3R5 266 aa29.72■■■□□ 2.35
R3HDM4-205ENST00000589445 AKAP4Q5JQC9 854 aa29.72■■■□□ 2.35
R3HDM4-205ENST00000589445 PNISRQ8TF01 805 aaKnown RBP29.72■■■□□ 2.35
R3HDM4-205ENST00000589445 PLEKHF1Q96S99 279 aa29.72■■■□□ 2.35
R3HDM4-205ENST00000589445 HSP90AB1P08238 724 aaKnown RBP29.71■■■□□ 2.35
R3HDM4-205ENST00000589445 FAM9BQ8IZU0 186 aa29.71■■■□□ 2.35
R3HDM4-205ENST00000589445 MPRIPQ6WCQ1 1025 aa29.69■■■□□ 2.34
R3HDM4-205ENST00000589445 RUNDC1Q96C34 613 aa29.68■■■□□ 2.34
R3HDM4-205ENST00000589445 KCNQ2O43526 872 aa29.67■■■□□ 2.34
R3HDM4-205ENST00000589445 NKX1-1Q15270 411 aaPredicted RBP29.67■■■□□ 2.34
R3HDM4-205ENST00000589445 DCAF5Q96JK2 942 aa29.67■■■□□ 2.34
R3HDM4-205ENST00000589445 RGPD3A6NKT7 1758 aaPredicted RBP29.67■■■□□ 2.34
R3HDM4-205ENST00000589445 RGPD4Q7Z3J3 1758 aa29.67■■■□□ 2.34
R3HDM4-205ENST00000589445 GNAT3A8MTJ3 354 aa29.66■■■□□ 2.34
R3HDM4-205ENST00000589445 PRIM1P49642 420 aaKnown RBP29.66■■■□□ 2.34
R3HDM4-205ENST00000589445 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
R3HDM4-205ENST00000589445 MRC1P22897 1456 aa29.66■■■□□ 2.34
R3HDM4-205ENST00000589445 SIPA1L3O60292 1781 aaPredicted RBP29.65■■■□□ 2.34
R3HDM4-205ENST00000589445 PTF1AQ7RTS3 328 aa29.65■■■□□ 2.34
R3HDM4-205ENST00000589445 BCL11BQ9C0K0 894 aaPredicted RBP29.64■■■□□ 2.34
R3HDM4-205ENST00000589445 RRP7AQ9Y3A4 280 aaKnown RBP29.63■■■□□ 2.33
R3HDM4-205ENST00000589445 RTF1Q92541 710 aaKnown RBP29.62■■■□□ 2.33
R3HDM4-205ENST00000589445 TMOD3Q9NYL9 352 aa29.62■■■□□ 2.33
R3HDM4-205ENST00000589445 PAPPAQ13219 1627 aa29.61■■■□□ 2.33
R3HDM4-205ENST00000589445 RNMTO43148 476 aaKnown RBP29.6■■■□□ 2.33
R3HDM4-205ENST00000589445 APBA3O96018 575 aa29.6■■■□□ 2.33
R3HDM4-205ENST00000589445 NEUROD2Q15784 382 aa29.6■■■□□ 2.33
R3HDM4-205ENST00000589445 PSDA5PKW4 1024 aaPredicted RBP29.59■■■□□ 2.33
R3HDM4-205ENST00000589445 CABP4P57796 275 aa29.59■■■□□ 2.33
R3HDM4-205ENST00000589445 LGR6Q9HBX8 967 aa29.59■■■□□ 2.33
R3HDM4-205ENST00000589445 RREB1Q92766 1687 aa29.59■■■□□ 2.33
R3HDM4-205ENST00000589445 SENP3-EIF4A1A0A087X0R7 540 aa29.58■■■□□ 2.33
R3HDM4-205ENST00000589445 LY75O60449 1722 aa29.58■■■□□ 2.33
R3HDM4-205ENST00000589445 TMPOP42166 694 aaKnown RBP29.58■■■□□ 2.33
R3HDM4-205ENST00000589445 BAG6P46379 1132 aa29.58■■■□□ 2.33
R3HDM4-205ENST00000589445 ERVV-2B6SEH9 535 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms