RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 USP26Q9BXU7 913 aa18.88■□□□□ 0.61
SAFB-205ENST00000588852 INTS3Q68E01 1043 aaKnown RBP18.87■□□□□ 0.61
SAFB-205ENST00000588852 ZGPATQ8N5A5 531 aaKnown RBP18.87■□□□□ 0.61
SAFB-205ENST00000588852 ANKRD44Q8N8A2 993 aa18.87■□□□□ 0.61
SAFB-205ENST00000588852 NAP1L5Q96NT1 182 aaPredicted RBP18.87■□□□□ 0.61
SAFB-205ENST00000588852 RGS12O14924 1447 aa18.87■□□□□ 0.61
SAFB-205ENST00000588852 BAG4O95429 457 aaKnown RBP18.87■□□□□ 0.61
SAFB-205ENST00000588852 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
SAFB-205ENST00000588852 CHL1O00533 1208 aa18.86■□□□□ 0.61
SAFB-205ENST00000588852 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
SAFB-205ENST00000588852 NECTIN2Q92692 538 aa18.86■□□□□ 0.61
SAFB-205ENST00000588852 AATKQ6ZMQ8 1374 aa18.85■□□□□ 0.61
SAFB-205ENST00000588852 NCLP19338 710 aaKnown RBP18.85■□□□□ 0.61
SAFB-205ENST00000588852 FOXD4L5Q5VV16 416 aaPredicted RBP18.85■□□□□ 0.61
SAFB-205ENST00000588852 FOXD4L4Q8WXT5 416 aaPredicted RBP18.85■□□□□ 0.61
SAFB-205ENST00000588852 DDX49Q9Y6V7 483 aaKnown RBP18.85■□□□□ 0.61
SAFB-205ENST00000588852 TSPOAP1O95153 1857 aa18.85■□□□□ 0.61
SAFB-205ENST00000588852 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
SAFB-205ENST00000588852 CLCN1P35523 988 aa18.83■□□□□ 0.61
SAFB-205ENST00000588852 ACEP12821 1306 aa18.83■□□□□ 0.61
SAFB-205ENST00000588852 SETD1AO15047 1707 aaKnown RBP18.82■□□□□ 0.6
SAFB-205ENST00000588852 ESPNB1AK53 854 aa18.82■□□□□ 0.6
SAFB-205ENST00000588852 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
SAFB-205ENST00000588852 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
SAFB-205ENST00000588852 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
SAFB-205ENST00000588852 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
SAFB-205ENST00000588852 RABEP1Q15276 862 aa18.81■□□□□ 0.6
SAFB-205ENST00000588852 PLPPR3Q6T4P5 718 aa18.81■□□□□ 0.6
SAFB-205ENST00000588852 MTHFSDQ2M296 383 aaKnown RBP18.8■□□□□ 0.6
SAFB-205ENST00000588852 RPAP2Q8IXW5 612 aaPredicted RBP18.8■□□□□ 0.6
SAFB-205ENST00000588852 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
SAFB-205ENST00000588852 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
SAFB-205ENST00000588852 NOL8Q76FK4 1167 aaKnown RBP18.79■□□□□ 0.6
SAFB-205ENST00000588852 TRIM44Q96DX7 344 aaPredicted RBP18.79■□□□□ 0.6
SAFB-205ENST00000588852 SKOR2Q2VWA4 1001 aaPredicted RBP18.79■□□□□ 0.6
SAFB-205ENST00000588852 MAP3K19Q56UN5 1328 aa18.79■□□□□ 0.6
SAFB-205ENST00000588852 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.78■□□□□ 0.6
SAFB-205ENST00000588852 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
SAFB-205ENST00000588852 RBM27Q9P2N5 1060 aaKnown RBP18.78■□□□□ 0.6
SAFB-205ENST00000588852 TSPYL4Q9UJ04 414 aa18.78■□□□□ 0.6
SAFB-205ENST00000588852 ZDHHC9Q9Y397 364 aa18.77■□□□□ 0.6
SAFB-205ENST00000588852 GOLGA6L22H0YM25 854 aa18.77■□□□□ 0.59
SAFB-205ENST00000588852 PRPF40AO75400 957 aaKnown RBP18.77■□□□□ 0.59
SAFB-205ENST00000588852 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
SAFB-205ENST00000588852 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
SAFB-205ENST00000588852 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
SAFB-205ENST00000588852 ESF1Q9H501 851 aaKnown RBP18.76■□□□□ 0.59
SAFB-205ENST00000588852 LMBRD1Q9NUN5 540 aa18.76■□□□□ 0.59
SAFB-205ENST00000588852 PDE1AP54750 535 aa18.75■□□□□ 0.59
SAFB-205ENST00000588852 NSFL1CQ9UNZ2 370 aaKnown RBP18.75■□□□□ 0.59
SAFB-205ENST00000588852 PNMA6EA0A0J9YXQ4 647 aa18.74■□□□□ 0.59
SAFB-205ENST00000588852 CYP2E1P05181 493 aaPredicted RBP18.74■□□□□ 0.59
SAFB-205ENST00000588852 FOXD4L6Q3SYB3 417 aaPredicted RBP18.74■□□□□ 0.59
SAFB-205ENST00000588852 FOXD4L3Q6VB84 417 aaPredicted RBP18.74■□□□□ 0.59
SAFB-205ENST00000588852 CRB1P82279 1406 aa18.74■□□□□ 0.59
SAFB-205ENST00000588852 RIMS1Q86UR5 1692 aaKnown RBP18.74■□□□□ 0.59
SAFB-205ENST00000588852 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
SAFB-205ENST00000588852 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 SPATA31D1Q6ZQQ2 1576 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 PTPRCP08575 1304 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 C3P01024 1663 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 LTKP29376 864 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 NEK4P51957 841 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 PALD1Q9ULE6 856 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 CLEC17AQ6ZS10 378 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 GPT2Q8TD30 523 aa18.73■□□□□ 0.59
SAFB-205ENST00000588852 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
SAFB-205ENST00000588852 MON2Q7Z3U7 1717 aa18.72■□□□□ 0.59
SAFB-205ENST00000588852 ERC2O15083 957 aa18.72■□□□□ 0.59
SAFB-205ENST00000588852 ZSCAN23Q3MJ62 389 aa18.72■□□□□ 0.59
SAFB-205ENST00000588852 CASC1Q6TDU7 716 aa18.72■□□□□ 0.59
SAFB-205ENST00000588852 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
SAFB-205ENST00000588852 RILPL2Q969X0 211 aa18.72■□□□□ 0.59
SAFB-205ENST00000588852 PEAK1Q9H792 1746 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 ST18O60284 1047 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 UNC5CLQ8IV45 518 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 PRIM1P49642 420 aaKnown RBP18.71■□□□□ 0.59
SAFB-205ENST00000588852 EYA1Q99502 592 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 RBSNQ9H1K0 784 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
SAFB-205ENST00000588852 NUCB2P80303 420 aa18.7■□□□□ 0.58
SAFB-205ENST00000588852 FKBP5Q13451 457 aaPredicted RBP18.7■□□□□ 0.58
SAFB-205ENST00000588852 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
SAFB-205ENST00000588852 CEBPAP49715 358 aaPredicted RBP18.7■□□□□ 0.58
SAFB-205ENST00000588852 LTV1Q96GA3 475 aaPredicted RBP18.7■□□□□ 0.58
SAFB-205ENST00000588852 IL25Q9H293 177 aa18.7■□□□□ 0.58
SAFB-205ENST00000588852 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
SAFB-205ENST00000588852 DTNBO60941 627 aa18.69■□□□□ 0.58
SAFB-205ENST00000588852 REC8O95072 547 aa18.69■□□□□ 0.58
SAFB-205ENST00000588852 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
SAFB-205ENST00000588852 MAP4K4O95819 1239 aaPredicted RBP18.69■□□□□ 0.58
SAFB-205ENST00000588852 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
SAFB-205ENST00000588852 UPF3BQ9BZI7 483 aaKnown RBP18.69■□□□□ 0.58
SAFB-205ENST00000588852 OVOS2A0A0J9YW53 1432 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 OVOS2Q6IE36 1432 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 TMX3Q96JJ7 454 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 HMMRO75330 724 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 GNAI2P04899 355 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 AMPHP49418 695 aa18.68■□□□□ 0.58
SAFB-205ENST00000588852 FLIIQ13045 1269 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 357.6 ms