RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 BCL9O00512 1426 aa27.31■■□□□ 1.96
DDX39A-207ENST00000588542 ZCRB1Q8TBF4 217 aaKnown RBP27.3■■□□□ 1.96
DDX39A-207ENST00000588542 DIAPH1O60610 1272 aaKnown RBP27.27■■□□□ 1.96
DDX39A-207ENST00000588542 TRIM37O94972 964 aa27.26■■□□□ 1.95
DDX39A-207ENST00000588542 DDX54Q8TDD1 881 aaKnown RBP27.26■■□□□ 1.95
DDX39A-207ENST00000588542 KAT6BQ8WYB5 2073 aa27.26■■□□□ 1.95
DDX39A-207ENST00000588542 KDRP35968 1356 aa27.25■■□□□ 1.95
DDX39A-207ENST00000588542 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
DDX39A-207ENST00000588542 NHSQ6T4R5 1651 aa27.24■■□□□ 1.95
DDX39A-207ENST00000588542 RALBP1Q15311 655 aa27.23■■□□□ 1.95
DDX39A-207ENST00000588542 SULT6B1Q6IMI4 303 aa27.23■■□□□ 1.95
DDX39A-207ENST00000588542 DOT1LQ8TEK3 1739 aa27.22■■□□□ 1.95
DDX39A-207ENST00000588542 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
DDX39A-207ENST00000588542 SF3B2Q13435 895 aaKnown RBP27.21■■□□□ 1.95
DDX39A-207ENST00000588542 CFAP53Q96M91 514 aa27.21■■□□□ 1.95
DDX39A-207ENST00000588542 PTF1AQ7RTS3 328 aa27.2■■□□□ 1.94
DDX39A-207ENST00000588542 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
DDX39A-207ENST00000588542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.2■■□□□ 1.94
DDX39A-207ENST00000588542 PCDH11XQ9BZA7 1347 aa27.19■■□□□ 1.94
DDX39A-207ENST00000588542 PCDH11YQ9BZA8 1340 aa27.19■■□□□ 1.94
DDX39A-207ENST00000588542 CYP27B1O15528 508 aa27.19■■□□□ 1.94
DDX39A-207ENST00000588542 SPG7Q9UQ90 795 aa27.18■■□□□ 1.94
DDX39A-207ENST00000588542 TOGARAM1Q9Y4F4 1720 aa27.17■■□□□ 1.94
DDX39A-207ENST00000588542 HMOX1P09601 288 aa27.17■■□□□ 1.94
DDX39A-207ENST00000588542 ACSBG1Q96GR2 724 aa27.17■■□□□ 1.94
DDX39A-207ENST00000588542 BCL11BQ9C0K0 894 aaPredicted RBP27.17■■□□□ 1.94
DDX39A-207ENST00000588542 BTAF1O14981 1849 aa27.17■■□□□ 1.94
DDX39A-207ENST00000588542 KCNQ2O43526 872 aa27.16■■□□□ 1.94
DDX39A-207ENST00000588542 U2SURPO15042 1029 aaKnown RBP27.15■■□□□ 1.94
DDX39A-207ENST00000588542 BAG6P46379 1132 aa27.15■■□□□ 1.94
DDX39A-207ENST00000588542 PRKRIP1Q9H875 184 aaPredicted RBP27.15■■□□□ 1.94
DDX39A-207ENST00000588542 ITGB4P16144 1822 aa27.15■■□□□ 1.94
DDX39A-207ENST00000588542 RGPD3A6NKT7 1758 aaPredicted RBP27.14■■□□□ 1.94
DDX39A-207ENST00000588542 RGPD4Q7Z3J3 1758 aa27.14■■□□□ 1.94
DDX39A-207ENST00000588542 APBA3O96018 575 aa27.14■■□□□ 1.94
DDX39A-207ENST00000588542 MYBBP1AQ9BQG0 1328 aaKnown RBP27.14■■□□□ 1.93
DDX39A-207ENST00000588542 RREB1Q92766 1687 aa27.12■■□□□ 1.93
DDX39A-207ENST00000588542 EN1Q05925 392 aaPredicted RBP27.12■■□□□ 1.93
DDX39A-207ENST00000588542 PHKG2P15735 406 aa27.11■■□□□ 1.93
DDX39A-207ENST00000588542 NKX1-1Q15270 411 aaPredicted RBP27.11■■□□□ 1.93
DDX39A-207ENST00000588542 PLEKHO1Q53GL0 409 aaPredicted RBP27.11■■□□□ 1.93
DDX39A-207ENST00000588542 AMOTQ4VCS5 1084 aa27.1■■□□□ 1.93
DDX39A-207ENST00000588542 CAMKK2Q96RR4 588 aa27.1■■□□□ 1.93
DDX39A-207ENST00000588542 NUDCQ9Y266 331 aa27.1■■□□□ 1.93
DDX39A-207ENST00000588542 VIRMAQ69YN4 1812 aaKnown RBP27.09■■□□□ 1.93
DDX39A-207ENST00000588542 IFNL2Q8IZJ0 200 aa27.09■■□□□ 1.93
DDX39A-207ENST00000588542 PRIM1P49642 420 aaKnown RBP27.08■■□□□ 1.93
DDX39A-207ENST00000588542 EZH2Q15910 746 aaKnown RBP27.08■■□□□ 1.93
DDX39A-207ENST00000588542 PLSCR1O15162 318 aa27.06■■□□□ 1.92
DDX39A-207ENST00000588542 ZNF530Q6P9A1 599 aaPredicted RBP27.06■■□□□ 1.92
DDX39A-207ENST00000588542 RSPH6AQ9H0K4 717 aa27.06■■□□□ 1.92
DDX39A-207ENST00000588542 NUP188Q5SRE5 1749 aa27.06■■□□□ 1.92
DDX39A-207ENST00000588542 U2AF1L5P0DN76 240 aaPredicted RBP27.05■■□□□ 1.92
DDX39A-207ENST00000588542 U2AF1Q01081 240 aaKnown RBP eCLIP27.05■■□□□ 1.922e-6■□□□□ 10.7
DDX39A-207ENST00000588542 SCN11AQ9UI33 1791 aa27.04■■□□□ 1.92
DDX39A-207ENST00000588542 SYTL4Q96C24 671 aaPredicted RBP27.03■■□□□ 1.92
DDX39A-207ENST00000588542 LY75O60449 1722 aa27.02■■□□□ 1.92
DDX39A-207ENST00000588542 KDM6AO15550 1401 aaPredicted RBP27.01■■□□□ 1.91
DDX39A-207ENST00000588542 MTHFSDQ2M296 383 aaKnown RBP27.01■■□□□ 1.91
DDX39A-207ENST00000588542 FCHSD2O94868 740 aa27■■□□□ 1.91
DDX39A-207ENST00000588542 PRKAR2BP31323 418 aa27■■□□□ 1.91
DDX39A-207ENST00000588542 ADAMTS7Q9UKP4 1686 aa26.99■■□□□ 1.91
DDX39A-207ENST00000588542 C1orf141Q5JVX7 400 aa26.99■■□□□ 1.91
DDX39A-207ENST00000588542 PROM2Q8N271 834 aa26.99■■□□□ 1.91
DDX39A-207ENST00000588542 PHACTR3Q96KR7 559 aa26.99■■□□□ 1.91
DDX39A-207ENST00000588542 HSP90AB1P08238 724 aaKnown RBP26.98■■□□□ 1.91
DDX39A-207ENST00000588542 AKAP4Q5JQC9 854 aa26.98■■□□□ 1.91
DDX39A-207ENST00000588542 DCAF5Q96JK2 942 aa26.98■■□□□ 1.91
DDX39A-207ENST00000588542 MPRIPQ6WCQ1 1025 aa26.97■■□□□ 1.91
DDX39A-207ENST00000588542 PIGBQ92521 554 aa26.95■■□□□ 1.9
DDX39A-207ENST00000588542 ERVV-2B6SEH9 535 aa26.94■■□□□ 1.9
DDX39A-207ENST00000588542 TXNRD1Q16881 649 aa26.94■■□□□ 1.9
DDX39A-207ENST00000588542 DLG5Q8TDM6 1919 aa26.94■■□□□ 1.9
DDX39A-207ENST00000588542 ANP32CO43423 234 aa26.93■■□□□ 1.9
DDX39A-207ENST00000588542 GAS2L2Q8NHY3 880 aa26.92■■□□□ 1.9
DDX39A-207ENST00000588542 PLEKHF1Q96S99 279 aa26.92■■□□□ 1.9
DDX39A-207ENST00000588542 LGR6Q9HBX8 967 aa26.91■■□□□ 1.9
DDX39A-207ENST00000588542 TMOD3Q9NYL9 352 aa26.91■■□□□ 1.9
DDX39A-207ENST00000588542 PAPPAQ13219 1627 aa26.9■■□□□ 1.9
DDX39A-207ENST00000588542 MRC1P22897 1456 aa26.89■■□□□ 1.9
DDX39A-207ENST00000588542 MAP3K5Q99683 1374 aa26.89■■□□□ 1.9
DDX39A-207ENST00000588542 RNMTO43148 476 aaKnown RBP26.89■■□□□ 1.9
DDX39A-207ENST00000588542 CCDC184Q52MB2 194 aa26.89■■□□□ 1.9
DDX39A-207ENST00000588542 SIPA1L3O60292 1781 aaPredicted RBP26.89■■□□□ 1.89
DDX39A-207ENST00000588542 LRRC4BQ9NT99 713 aa26.88■■□□□ 1.89
DDX39A-207ENST00000588542 TAF1LQ8IZX4 1826 aa26.88■■□□□ 1.89
DDX39A-207ENST00000588542 PALLDQ8WX93 1383 aa26.86■■□□□ 1.89
DDX39A-207ENST00000588542 GNAT3A8MTJ3 354 aa26.86■■□□□ 1.89
DDX39A-207ENST00000588542 CABP4P57796 275 aa26.86■■□□□ 1.89
DDX39A-207ENST00000588542 ASAP1Q9ULH1 1129 aa26.86■■□□□ 1.89
DDX39A-207ENST00000588542 NFATC2IPQ8NCF5 419 aa26.85■■□□□ 1.89
DDX39A-207ENST00000588542 SLC27A3Q5K4L6 730 aa26.84■■□□□ 1.89
DDX39A-207ENST00000588542 IL17REQ8NFR9 667 aa26.84■■□□□ 1.89
DDX39A-207ENST00000588542 SMARCC1Q92922 1105 aaPredicted RBP26.84■■□□□ 1.89
DDX39A-207ENST00000588542 PNNQ9H307 717 aaKnown RBP26.84■■□□□ 1.89
DDX39A-207ENST00000588542 ANO8Q9HCE9 1232 aaPredicted RBP26.84■■□□□ 1.89
DDX39A-207ENST00000588542 ATG3Q9NT62 314 aa26.84■■□□□ 1.89
DDX39A-207ENST00000588542 C5P01031 1676 aa26.83■■□□□ 1.89
DDX39A-207ENST00000588542 KCNQ4P56696 695 aa26.83■■□□□ 1.89
DDX39A-207ENST00000588542 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms