RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CHD4Q14839 1912 aa19.14■□□□□ 0.65
HDAC5-208ENST00000588419 FHDC1Q9C0D6 1143 aaPredicted RBP19.14■□□□□ 0.65
HDAC5-208ENST00000588419 LRRC4BQ9NT99 713 aa19.14■□□□□ 0.65
HDAC5-208ENST00000588419 KCNQ4P56696 695 aa19.13■□□□□ 0.65
HDAC5-208ENST00000588419 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
HDAC5-208ENST00000588419 FYB1O15117 783 aa19.12■□□□□ 0.65
HDAC5-208ENST00000588419 PRIM1P49642 420 aaKnown RBP19.12■□□□□ 0.65
HDAC5-208ENST00000588419 KLHL34Q8N239 644 aa19.12■□□□□ 0.65
HDAC5-208ENST00000588419 ZCRB1Q8TBF4 217 aaKnown RBP19.12■□□□□ 0.65
HDAC5-208ENST00000588419 NSD3Q9BZ95 1437 aa19.11■□□□□ 0.65
HDAC5-208ENST00000588419 ITGB4P16144 1822 aa19.11■□□□□ 0.65
HDAC5-208ENST00000588419 C5P01031 1676 aa19.11■□□□□ 0.65
HDAC5-208ENST00000588419 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
HDAC5-208ENST00000588419 NBPF6Q5VWK0 638 aa19.1■□□□□ 0.65
HDAC5-208ENST00000588419 RAPGEF4Q8WZA2 1011 aa19.1■□□□□ 0.65
HDAC5-208ENST00000588419 NBPF4Q96M43 638 aa19.1■□□□□ 0.65
HDAC5-208ENST00000588419 NSD2O96028 1365 aa19.09■□□□□ 0.65
HDAC5-208ENST00000588419 SYT17Q9BSW7 474 aa19.09■□□□□ 0.65
HDAC5-208ENST00000588419 POLR3GLQ9BT43 218 aa19.09■□□□□ 0.65
HDAC5-208ENST00000588419 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.65
HDAC5-208ENST00000588419 TATP17735 454 aaPredicted RBP19.08■□□□□ 0.64
HDAC5-208ENST00000588419 SLC27A3Q5K4L6 730 aa19.08■□□□□ 0.64
HDAC5-208ENST00000588419 ARXQ96QS3 562 aa19.08■□□□□ 0.64
HDAC5-208ENST00000588419 TAF1LQ8IZX4 1826 aa19.08■□□□□ 0.64
HDAC5-208ENST00000588419 FLT4P35916 1363 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 HSP90AB2PQ58FF8 381 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 SGIP1Q9BQI5 828 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 TFCP2L1Q9NZI6 479 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 PKD1L3Q7Z443 1732 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 ANKRD26Q9UPS8 1709 aa19.07■□□□□ 0.64
HDAC5-208ENST00000588419 COL24A1Q17RW2 1714 aa19.06■□□□□ 0.64
HDAC5-208ENST00000588419 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
HDAC5-208ENST00000588419 AKT1S1Q96B36 256 aa19.06■□□□□ 0.64
HDAC5-208ENST00000588419 PCGF6Q9BYE7 350 aa19.06■□□□□ 0.64
HDAC5-208ENST00000588419 CCNL1Q9UK58 526 aaPredicted RBP19.06■□□□□ 0.64
HDAC5-208ENST00000588419 INSRP06213 1382 aa19.06■□□□□ 0.64
HDAC5-208ENST00000588419 PNPLA7Q6ZV29 1317 aa19.05■□□□□ 0.64
HDAC5-208ENST00000588419 MSH5O43196 834 aa19.05■□□□□ 0.64
HDAC5-208ENST00000588419 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
HDAC5-208ENST00000588419 PCDH11XQ9BZA7 1347 aa19.03■□□□□ 0.64
HDAC5-208ENST00000588419 PCDH11YQ9BZA8 1340 aa19.03■□□□□ 0.64
HDAC5-208ENST00000588419 POLD1P28340 1107 aa19.03■□□□□ 0.64
HDAC5-208ENST00000588419 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
HDAC5-208ENST00000588419 CGNL1Q0VF96 1302 aa19.02■□□□□ 0.64
HDAC5-208ENST00000588419 CARD14Q9BXL6 1004 aa19.02■□□□□ 0.64
HDAC5-208ENST00000588419 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
HDAC5-208ENST00000588419 MPRIPQ6WCQ1 1025 aa18.99■□□□□ 0.63
HDAC5-208ENST00000588419 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
HDAC5-208ENST00000588419 PALLDQ8WX93 1383 aa18.98■□□□□ 0.63
HDAC5-208ENST00000588419 C4BP0C0L5 1744 aa18.98■□□□□ 0.63
HDAC5-208ENST00000588419 GPR162Q16538 588 aa18.98■□□□□ 0.63
HDAC5-208ENST00000588419 MAP3K5Q99683 1374 aa18.97■□□□□ 0.63
HDAC5-208ENST00000588419 MSL1Q68DK7 614 aa18.97■□□□□ 0.63
HDAC5-208ENST00000588419 TNNT2P45379 298 aaPredicted RBP18.96■□□□□ 0.63
HDAC5-208ENST00000588419 UBR3Q6ZT12 1888 aa18.96■□□□□ 0.63
HDAC5-208ENST00000588419 CYP27B1O15528 508 aa18.95■□□□□ 0.62
HDAC5-208ENST00000588419 COL23A1Q86Y22 540 aaPredicted RBP18.94■□□□□ 0.62
HDAC5-208ENST00000588419 ZNF784Q8NCA9 323 aaPredicted RBP18.94■□□□□ 0.62
HDAC5-208ENST00000588419 NLGN2Q8NFZ4 835 aa18.93■□□□□ 0.62
HDAC5-208ENST00000588419 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
HDAC5-208ENST00000588419 UTRNP46939 3433 aa18.93■□□□□ 0.62
HDAC5-208ENST00000588419 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
HDAC5-208ENST00000588419 AK7Q96M32 723 aa18.91■□□□□ 0.62
HDAC5-208ENST00000588419 SPG7Q9UQ90 795 aa18.91■□□□□ 0.62
HDAC5-208ENST00000588419 PHF14O94880 888 aa18.9■□□□□ 0.62
HDAC5-208ENST00000588419 EYA1Q99502 592 aa18.9■□□□□ 0.62
HDAC5-208ENST00000588419 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
HDAC5-208ENST00000588419 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
HDAC5-208ENST00000588419 SMARCC1Q92922 1105 aaPredicted RBP18.89■□□□□ 0.61
HDAC5-208ENST00000588419 HSPA5P11021 654 aaKnown RBP18.88■□□□□ 0.61
HDAC5-208ENST00000588419 PIGBQ92521 554 aa18.88■□□□□ 0.61
HDAC5-208ENST00000588419 POLKQ9UBT6 870 aa18.88■□□□□ 0.61
HDAC5-208ENST00000588419 EIF4G2P78344 907 aaKnown RBP eCLIP18.87■□□□□ 0.61
HDAC5-208ENST00000588419 SMIM5Q71RC9 77 aa18.87■□□□□ 0.61
HDAC5-208ENST00000588419 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
HDAC5-208ENST00000588419 EIF4A2Q14240 407 aaKnown RBP18.86■□□□□ 0.61
HDAC5-208ENST00000588419 FLAD1Q8NFF5 587 aa18.85■□□□□ 0.61
HDAC5-208ENST00000588419 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
HDAC5-208ENST00000588419 IFNL2Q8IZJ0 200 aa18.84■□□□□ 0.61
HDAC5-208ENST00000588419 PANK3Q9H999 370 aa18.84■□□□□ 0.61
HDAC5-208ENST00000588419 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
HDAC5-208ENST00000588419 LOC102724428A0A0B4J2F2 783 aa18.83■□□□□ 0.6
HDAC5-208ENST00000588419 PHKG2P15735 406 aa18.83■□□□□ 0.6
HDAC5-208ENST00000588419 SIK1P57059 783 aa18.83■□□□□ 0.6
HDAC5-208ENST00000588419 NKX1-1Q15270 411 aaPredicted RBP18.83■□□□□ 0.6
HDAC5-208ENST00000588419 AMIGO3Q86WK7 504 aa18.83■□□□□ 0.6
HDAC5-208ENST00000588419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.82■□□□□ 0.6
HDAC5-208ENST00000588419 YBX3P16989 372 aaKnown RBP eCLIP18.82■□□□□ 0.6
HDAC5-208ENST00000588419 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
HDAC5-208ENST00000588419 LINC00116Q8NCU8 138 aa18.82■□□□□ 0.6
HDAC5-208ENST00000588419 WWC3Q9ULE0 1092 aa18.82■□□□□ 0.6
HDAC5-208ENST00000588419 ASAP1Q9ULH1 1129 aa18.82■□□□□ 0.6
HDAC5-208ENST00000588419 COL5A3P25940 1745 aaPredicted RBP18.81■□□□□ 0.6
HDAC5-208ENST00000588419 ATP6V1AP38606 617 aa18.81■□□□□ 0.6
HDAC5-208ENST00000588419 GNPATO15228 680 aa18.8■□□□□ 0.6
HDAC5-208ENST00000588419 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC5-208ENST00000588419 IGSF1Q8N6C5 1336 aa18.79■□□□□ 0.6
HDAC5-208ENST00000588419 GOLGB1Q14789 3259 aaKnown RBP18.79■□□□□ 0.6
HDAC5-208ENST00000588419 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
HDAC5-208ENST00000588419 ITPK1Q13572 414 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms