RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
HDAC5-207ENST00000588261 NSD2O96028 1365 aa20.45■□□□□ 0.86
HDAC5-207ENST00000588261 CARD14Q9BXL6 1004 aa20.43■□□□□ 0.86
HDAC5-207ENST00000588261 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
HDAC5-207ENST00000588261 NBPF6Q5VWK0 638 aa20.42■□□□□ 0.86
HDAC5-207ENST00000588261 DDX54Q8TDD1 881 aaKnown RBP20.42■□□□□ 0.86
HDAC5-207ENST00000588261 NBPF4Q96M43 638 aa20.42■□□□□ 0.86
HDAC5-207ENST00000588261 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
HDAC5-207ENST00000588261 MTFR1LQ9H019 292 aa20.42■□□□□ 0.86
HDAC5-207ENST00000588261 ZNF316A6NFI3 1004 aaPredicted RBP20.41■□□□□ 0.86
HDAC5-207ENST00000588261 RTL1A6NKG5 1358 aa20.4■□□□□ 0.86
HDAC5-207ENST00000588261 AMPHP49418 695 aa20.4■□□□□ 0.86
HDAC5-207ENST00000588261 USHBP1Q8N6Y0 703 aa20.4■□□□□ 0.86
HDAC5-207ENST00000588261 DOT1LQ8TEK3 1739 aa20.4■□□□□ 0.86
HDAC5-207ENST00000588261 KCNQ4P56696 695 aa20.39■□□□□ 0.85
HDAC5-207ENST00000588261 SYT17Q9BSW7 474 aa20.39■□□□□ 0.85
HDAC5-207ENST00000588261 AKT1S1Q96B36 256 aa20.38■□□□□ 0.85
HDAC5-207ENST00000588261 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
HDAC5-207ENST00000588261 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
HDAC5-207ENST00000588261 HSP90AB2PQ58FF8 381 aa20.37■□□□□ 0.85
HDAC5-207ENST00000588261 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
HDAC5-207ENST00000588261 PRIM1P49642 420 aaKnown RBP20.36■□□□□ 0.85
HDAC5-207ENST00000588261 PANK3Q9H999 370 aa20.36■□□□□ 0.85
HDAC5-207ENST00000588261 ZCRB1Q8TBF4 217 aaKnown RBP20.35■□□□□ 0.85
HDAC5-207ENST00000588261 UTRNP46939 3433 aa20.34■□□□□ 0.85
HDAC5-207ENST00000588261 LY75O60449 1722 aa20.34■□□□□ 0.85
HDAC5-207ENST00000588261 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
HDAC5-207ENST00000588261 TUBGCP6Q96RT7 1819 aa20.34■□□□□ 0.85
HDAC5-207ENST00000588261 INSRP06213 1382 aa20.34■□□□□ 0.85
HDAC5-207ENST00000588261 ARXQ96QS3 562 aa20.33■□□□□ 0.85
HDAC5-207ENST00000588261 EMILIN1Q9Y6C2 1016 aa20.33■□□□□ 0.85
HDAC5-207ENST00000588261 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
HDAC5-207ENST00000588261 PNPLA7Q6ZV29 1317 aa20.32■□□□□ 0.84
HDAC5-207ENST00000588261 SYTL4Q96C24 671 aaPredicted RBP20.31■□□□□ 0.84
HDAC5-207ENST00000588261 FLT4P35916 1363 aa20.31■□□□□ 0.84
HDAC5-207ENST00000588261 NPC1L1Q9UHC9 1359 aa20.31■□□□□ 0.84
HDAC5-207ENST00000588261 COL24A1Q17RW2 1714 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 NCAPD2Q15021 1401 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 SLC27A3Q5K4L6 730 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
HDAC5-207ENST00000588261 PER1O15534 1290 aaPredicted RBP20.29■□□□□ 0.84
HDAC5-207ENST00000588261 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
HDAC5-207ENST00000588261 KNSTRNQ9Y448 316 aa20.29■□□□□ 0.84
HDAC5-207ENST00000588261 TOGARAM1Q9Y4F4 1720 aa20.28■□□□□ 0.84
HDAC5-207ENST00000588261 KIF24Q5T7B8 1368 aa20.27■□□□□ 0.84
HDAC5-207ENST00000588261 CYP27B1O15528 508 aa20.27■□□□□ 0.84
HDAC5-207ENST00000588261 POLD1P28340 1107 aa20.26■□□□□ 0.83
HDAC5-207ENST00000588261 GPR162Q16538 588 aa20.25■□□□□ 0.83
HDAC5-207ENST00000588261 SMG6Q86US8 1419 aaKnown RBP20.25■□□□□ 0.83
HDAC5-207ENST00000588261 PKD1L3Q7Z443 1732 aa20.24■□□□□ 0.83
HDAC5-207ENST00000588261 AMER1Q5JTC6 1135 aaPredicted RBP20.24■□□□□ 0.83
HDAC5-207ENST00000588261 RAPGEF4Q8WZA2 1011 aa20.24■□□□□ 0.83
HDAC5-207ENST00000588261 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
HDAC5-207ENST00000588261 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
HDAC5-207ENST00000588261 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
HDAC5-207ENST00000588261 C1QTNF8P60827 252 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 TFCP2L1Q9NZI6 479 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
HDAC5-207ENST00000588261 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
HDAC5-207ENST00000588261 EYA1Q99502 592 aa20.2■□□□□ 0.82
HDAC5-207ENST00000588261 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
HDAC5-207ENST00000588261 KLHL34Q8N239 644 aa20.19■□□□□ 0.82
HDAC5-207ENST00000588261 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
HDAC5-207ENST00000588261 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
HDAC5-207ENST00000588261 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
HDAC5-207ENST00000588261 C5P01031 1676 aa20.18■□□□□ 0.82
HDAC5-207ENST00000588261 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
HDAC5-207ENST00000588261 ITGB4P16144 1822 aa20.18■□□□□ 0.82
HDAC5-207ENST00000588261 NLGN2Q8NFZ4 835 aa20.17■□□□□ 0.82
HDAC5-207ENST00000588261 TAF1LQ8IZX4 1826 aa20.16■□□□□ 0.82
HDAC5-207ENST00000588261 NKX1-1Q15270 411 aaPredicted RBP20.16■□□□□ 0.82
HDAC5-207ENST00000588261 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
HDAC5-207ENST00000588261 PIGBQ92521 554 aa20.16■□□□□ 0.82
HDAC5-207ENST00000588261 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
HDAC5-207ENST00000588261 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.81
HDAC5-207ENST00000588261 PELP1Q8IZL8 1130 aaKnown RBP20.14■□□□□ 0.81
HDAC5-207ENST00000588261 GOLGB1Q14789 3259 aaKnown RBP20.13■□□□□ 0.81
HDAC5-207ENST00000588261 GIGYF1O75420 1035 aaPredicted RBP20.13■□□□□ 0.81
HDAC5-207ENST00000588261 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
HDAC5-207ENST00000588261 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
HDAC5-207ENST00000588261 GRIN3BO60391 1043 aa20.12■□□□□ 0.81
HDAC5-207ENST00000588261 MORC1Q86VD1 984 aa20.12■□□□□ 0.81
HDAC5-207ENST00000588261 C4BP0C0L5 1744 aa20.12■□□□□ 0.81
HDAC5-207ENST00000588261 CC2D1BQ5T0F9 858 aaKnown RBP20.11■□□□□ 0.81
HDAC5-207ENST00000588261 MSH5O43196 834 aa20.09■□□□□ 0.81
HDAC5-207ENST00000588261 PHKG2P15735 406 aa20.09■□□□□ 0.81
HDAC5-207ENST00000588261 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
HDAC5-207ENST00000588261 UBR3Q6ZT12 1888 aa20.08■□□□□ 0.81
HDAC5-207ENST00000588261 RALBP1Q15311 655 aa20.08■□□□□ 0.81
HDAC5-207ENST00000588261 LINC00116Q8NCU8 138 aa20.08■□□□□ 0.81
HDAC5-207ENST00000588261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.08■□□□□ 0.81
HDAC5-207ENST00000588261 ASAP1Q9ULH1 1129 aa20.08■□□□□ 0.81
HDAC5-207ENST00000588261 YBX3P16989 372 aaKnown RBP eCLIP20.07■□□□□ 0.8
HDAC5-207ENST00000588261 ITPK1Q13572 414 aa20.07■□□□□ 0.8
HDAC5-207ENST00000588261 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms