RNA–Protein interactions for RNA: ENST00000588162.1

TXNL4A-208, Transcript of thioredoxin like 4A, human

TSL 2 BASIC

Gene TXNL4A, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TXNL4A-208	ENST00000588162	NBPF4	Q96M43	638 aa		34	■■■■□ 3.03
TXNL4A-208	ENST00000588162	EYA1	Q99502	592 aa		33.99	■■■■□ 3.03
TXNL4A-208	ENST00000588162	RREB1	Q92766	1687 aa		33.99	■■■■□ 3.03
TXNL4A-208	ENST00000588162	U2SURP	O15042	1029 aa	Known RBP	33.95	■■■■□ 3.03
TXNL4A-208	ENST00000588162	NUP188	Q5SRE5	1749 aa		33.95	■■■■□ 3.03
TXNL4A-208	ENST00000588162	IGSF1	Q8N6C5	1336 aa		33.94	■■■■□ 3.02
TXNL4A-208	ENST00000588162	YY1	P25490	414 aa		33.93	■■■■□ 3.02
TXNL4A-208	ENST00000588162	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.93	■■■■□ 3.02
TXNL4A-208	ENST00000588162	USHBP1	Q8N6Y0	703 aa		33.92	■■■■□ 3.02
TXNL4A-208	ENST00000588162	RAPGEF4	Q8WZA2	1011 aa		33.89	■■■■□ 3.02
TXNL4A-208	ENST00000588162	SPON1	Q9HCB6	807 aa		33.89	■■■■□ 3.02
TXNL4A-208	ENST00000588162	MRS2	Q9HD23	443 aa		33.89	■■■■□ 3.02
TXNL4A-208	ENST00000588162	NCAPD2	Q15021	1401 aa		33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	IL2RB	P14784	551 aa		33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	SULT6B1	Q6IMI4	303 aa		33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	WNK3	Q9BYP7	1800 aa		33.88	■■■■□ 3.01
TXNL4A-208	ENST00000588162	PPP1R1B	Q9UD71	204 aa	Predicted RBP	33.87	■■■■□ 3.01
TXNL4A-208	ENST00000588162	WDR43	Q15061	677 aa	Known RBP eCLIP	33.86	■■■■□ 3.01
TXNL4A-208	ENST00000588162	KCNQ2	O43526	872 aa		33.85	■■■■□ 3.01
TXNL4A-208	ENST00000588162	TAT	P17735	454 aa	Predicted RBP	33.85	■■■■□ 3.01
TXNL4A-208	ENST00000588162	CCER2	I3L3R5	266 aa		33.84	■■■■□ 3.01
TXNL4A-208	ENST00000588162	MIER1	Q8N108	512 aa		33.84	■■■■□ 3.01
TXNL4A-208	ENST00000588162	PARP4	Q9UKK3	1724 aa	Known RBP	33.82	■■■■□ 3
TXNL4A-208	ENST00000588162	HMOX1	P09601	288 aa		33.82	■■■■□ 3
TXNL4A-208	ENST00000588162	CCDC184	Q52MB2	194 aa		33.82	■■■■□ 3
TXNL4A-208	ENST00000588162	KDR	P35968	1356 aa		33.82	■■■■□ 3
TXNL4A-208	ENST00000588162	PNN	Q9H307	717 aa	Known RBP	33.81	■■■■□ 3
TXNL4A-208	ENST00000588162	FCHSD2	O94868	740 aa		33.8	■■■■□ 3
TXNL4A-208	ENST00000588162	AEBP1	Q8IUX7	1158 aa		33.8	■■■■□ 3
TXNL4A-208	ENST00000588162	EXOC5	O00471	708 aa		33.79	■■■■□ 3
TXNL4A-208	ENST00000588162	OVOS2	A0A0G2JMS6	1433 aa		33.79	■■■■□ 3
TXNL4A-208	ENST00000588162	PLEKHG2	Q9H7P9	1386 aa		33.78	■■■■□ 3
TXNL4A-208	ENST00000588162	DDB1	Q16531	1140 aa		33.78	■■■■□ 3
TXNL4A-208	ENST00000588162	DCAF8L1	A6NGE4	600 aa		33.77	■■■■□ 3
TXNL4A-208	ENST00000588162	MEGF6	O75095	1541 aa		33.76	■■■■□ 3
TXNL4A-208	ENST00000588162	PLSCR1	O15162	318 aa		33.76	■■■□□ 2.99
TXNL4A-208	ENST00000588162	NEFM	P07197	916 aa		33.74	■■■□□ 2.99
TXNL4A-208	ENST00000588162	ZCRB1	Q8TBF4	217 aa	Known RBP	33.74	■■■□□ 2.99
TXNL4A-208	ENST00000588162	RSPH6A	Q9H0K4	717 aa		33.74	■■■□□ 2.99
TXNL4A-208	ENST00000588162	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	33.74	■■■□□ 2.99	1e-6	■■□□□ 14.2
TXNL4A-208	ENST00000588162	SPG7	Q9UQ90	795 aa		33.74	■■■□□ 2.99
TXNL4A-208	ENST00000588162	PLEKHO1	Q53GL0	409 aa	Predicted RBP	33.73	■■■□□ 2.99
TXNL4A-208	ENST00000588162	PNISR	Q8TF01	805 aa	Known RBP	33.73	■■■□□ 2.99
TXNL4A-208	ENST00000588162	AMOT	Q4VCS5	1084 aa		33.72	■■■□□ 2.99
TXNL4A-208	ENST00000588162	PRKAR2B	P31323	418 aa		33.71	■■■□□ 2.99
TXNL4A-208	ENST00000588162	ADAMTS8	Q9UP79	889 aa		33.71	■■■□□ 2.99
TXNL4A-208	ENST00000588162	LRRC37A3	O60309	1634 aa		33.71	■■■□□ 2.99
TXNL4A-208	ENST00000588162	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.7	■■■□□ 2.99
TXNL4A-208	ENST00000588162	RGPD3	A6NKT7	1758 aa	Predicted RBP	33.69	■■■□□ 2.98
TXNL4A-208	ENST00000588162	RGPD4	Q7Z3J3	1758 aa		33.69	■■■□□ 2.98
TXNL4A-208	ENST00000588162	TNS2	Q63HR2	1409 aa		33.69	■■■□□ 2.98
TXNL4A-208	ENST00000588162	PKD1L3	Q7Z443	1732 aa		33.68	■■■□□ 2.98
TXNL4A-208	ENST00000588162	BCL11B	Q9C0K0	894 aa	Predicted RBP	33.68	■■■□□ 2.98
TXNL4A-208	ENST00000588162	PTF1A	Q7RTS3	328 aa		33.66	■■■□□ 2.98
TXNL4A-208	ENST00000588162	PCDH11X	Q9BZA7	1347 aa		33.65	■■■□□ 2.98
TXNL4A-208	ENST00000588162	PCDH11Y	Q9BZA8	1340 aa		33.65	■■■□□ 2.98
TXNL4A-208	ENST00000588162	MAPK8IP3	Q9UPT6	1336 aa		33.64	■■■□□ 2.98
TXNL4A-208	ENST00000588162	DDX54	Q8TDD1	881 aa	Known RBP	33.64	■■■□□ 2.98
TXNL4A-208	ENST00000588162	SBF2	Q86WG5	1849 aa		33.64	■■■□□ 2.98
TXNL4A-208	ENST00000588162	FAM9B	Q8IZU0	186 aa		33.62	■■■□□ 2.97
TXNL4A-208	ENST00000588162	PROM2	Q8N271	834 aa		33.62	■■■□□ 2.97
TXNL4A-208	ENST00000588162	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.62	■■■□□ 2.97
TXNL4A-208	ENST00000588162	MARCH10	Q8NA82	808 aa	Predicted RBP	33.61	■■■□□ 2.97
TXNL4A-208	ENST00000588162	GAS2L2	Q8NHY3	880 aa		33.61	■■■□□ 2.97
TXNL4A-208	ENST00000588162	RUNDC1	Q96C34	613 aa		33.61	■■■□□ 2.97
TXNL4A-208	ENST00000588162	PLEKHF1	Q96S99	279 aa		33.61	■■■□□ 2.97
TXNL4A-208	ENST00000588162	CASZ1	Q86V15	1759 aa		33.61	■■■□□ 2.97
TXNL4A-208	ENST00000588162	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.6	■■■□□ 2.97
TXNL4A-208	ENST00000588162	IFNL2	Q8IZJ0	200 aa		33.6	■■■□□ 2.97
TXNL4A-208	ENST00000588162	SHANK3	Q9BYB0	1731 aa		33.59	■■■□□ 2.97
TXNL4A-208	ENST00000588162	C1orf141	Q5JVX7	400 aa		33.59	■■■□□ 2.97
TXNL4A-208	ENST00000588162	PHACTR3	Q96KR7	559 aa		33.59	■■■□□ 2.97
TXNL4A-208	ENST00000588162	BCL9	O00512	1426 aa		33.59	■■■□□ 2.97
TXNL4A-208	ENST00000588162	ZBTB7A	O95365	584 aa		33.58	■■■□□ 2.97
TXNL4A-208	ENST00000588162	MTHFSD	Q2M296	383 aa	Known RBP	33.58	■■■□□ 2.97
TXNL4A-208	ENST00000588162	CCDC146	Q8IYE0	955 aa		33.56	■■■□□ 2.96
TXNL4A-208	ENST00000588162	CYP27B1	O15528	508 aa		33.55	■■■□□ 2.96
TXNL4A-208	ENST00000588162	HSP90AB1	P08238	724 aa	Known RBP	33.55	■■■□□ 2.96
TXNL4A-208	ENST00000588162	PHKG2	P15735	406 aa		33.54	■■■□□ 2.96
TXNL4A-208	ENST00000588162	PTGER2	P43116	358 aa		33.54	■■■□□ 2.96
TXNL4A-208	ENST00000588162	AKAP4	Q5JQC9	854 aa		33.54	■■■□□ 2.96
TXNL4A-208	ENST00000588162	TXNRD1	Q16881	649 aa		33.51	■■■□□ 2.95
TXNL4A-208	ENST00000588162	STK32B	Q9NY57	414 aa		33.51	■■■□□ 2.95
TXNL4A-208	ENST00000588162	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.51	■■■□□ 2.95
TXNL4A-208	ENST00000588162	NKX1-1	Q15270	411 aa	Predicted RBP	33.5	■■■□□ 2.95
TXNL4A-208	ENST00000588162	NFE2L2	Q16236	605 aa		33.5	■■■□□ 2.95
TXNL4A-208	ENST00000588162	GNAT3	A8MTJ3	354 aa		33.49	■■■□□ 2.95
TXNL4A-208	ENST00000588162	SLC15A2	Q16348	729 aa		33.48	■■■□□ 2.95
TXNL4A-208	ENST00000588162	DCAF5	Q96JK2	942 aa		33.47	■■■□□ 2.95
TXNL4A-208	ENST00000588162	MAP3K5	Q99683	1374 aa		33.47	■■■□□ 2.95
TXNL4A-208	ENST00000588162	TMPO	P42166	694 aa	Known RBP	33.45	■■■□□ 2.95
TXNL4A-208	ENST00000588162	RTF1	Q92541	710 aa	Known RBP	33.45	■■■□□ 2.95
TXNL4A-208	ENST00000588162	DLG5	Q8TDM6	1919 aa		33.44	■■■□□ 2.94
TXNL4A-208	ENST00000588162	HTATSF1	O43719	755 aa	Known RBP	33.44	■■■□□ 2.94
TXNL4A-208	ENST00000588162	ZNF784	Q8NCA9	323 aa	Predicted RBP	33.44	■■■□□ 2.94
TXNL4A-208	ENST00000588162	KAT6B	Q8WYB5	2073 aa		33.44	■■■□□ 2.94
TXNL4A-208	ENST00000588162	APAF1	O14727	1248 aa		33.43	■■■□□ 2.94
TXNL4A-208	ENST00000588162	RIPK4	P57078	832 aa		33.43	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms