RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 FAM43BQ6ZT52 329 aaPredicted RBP7.15□□□□□ -1.27
LINC01538-201ENST00000588074 ACBD3Q9H3P7 528 aa7.15□□□□□ -1.27
LINC01538-201ENST00000588074 DNMT3AQ9Y6K1 912 aaPredicted RBP7.15□□□□□ -1.27
LINC01538-201ENST00000588074 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 SLC34A2O95436 690 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 COL9A1P20849 921 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 DNAJB2P25686 324 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 GCGRP47871 477 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 SDE2Q6IQ49 451 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 PMFBP1Q8TBY8 1022 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 PRDM16Q9HAZ2 1276 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 RIPOR2Q9Y4F9 1068 aa7.14□□□□□ -1.27
LINC01538-201ENST00000588074 LAS1LQ9Y4W2 734 aaKnown RBP7.14□□□□□ -1.27
LINC01538-201ENST00000588074 SMAPO00193 183 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 DNTTIP2Q5QJE6 756 aaKnown RBP7.13□□□□□ -1.27
LINC01538-201ENST00000588074 OGFOD1Q8N543 542 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 C1orf216Q8TAB5 229 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 CAPN10Q9HC96 672 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 TCEAL1Q15170 157 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 TAS1R3Q7RTX0 852 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 MKNK1Q9BUB5 465 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 CUEDC1Q9NWM3 386 aaPredicted RBP7.13□□□□□ -1.27
LINC01538-201ENST00000588074 EGFL7Q9UHF1 273 aa7.13□□□□□ -1.27
LINC01538-201ENST00000588074 GALR2O43603 387 aaPredicted RBP7.12□□□□□ -1.27
LINC01538-201ENST00000588074 DKK1O94907 266 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 SWI5Q1ZZU3 235 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 ZNF454Q8N9F8 522 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 GAS2L2Q8NHY3 880 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 GTF3C2Q8WUA4 911 aaPredicted RBP7.12□□□□□ -1.27
LINC01538-201ENST00000588074 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
LINC01538-201ENST00000588074 C21orf2O43822 256 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 NBPF20Q3BBV1 942 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 CC2D1BQ5T0F9 858 aaKnown RBP7.12□□□□□ -1.27
LINC01538-201ENST00000588074 TMEM87AQ8NBN3 555 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 ZDHHC16Q969W1 377 aa7.12□□□□□ -1.27
LINC01538-201ENST00000588074 SLC10A3P09131 477 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 FANCCQ00597 558 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 NFKBIBQ15653 356 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 PCDHGA4Q9Y5G9 962 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 RALBP1Q15311 655 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 JAZF1Q86VZ6 243 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 RGL4Q8IZJ4 473 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 PIP4P2Q8N4L2 257 aa7.11□□□□□ -1.27
LINC01538-201ENST00000588074 GEMIN8Q9NWZ8 242 aaKnown RBP7.11□□□□□ -1.27
LINC01538-201ENST00000588074 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 ATP5J2-PTCD1G3V325 749 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 CCER2I3L3R5 266 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 LZTS3O60299 673 aaPredicted RBP7.1□□□□□ -1.27
LINC01538-201ENST00000588074 DNAJA1P31689 397 aaKnown RBP7.1□□□□□ -1.27
LINC01538-201ENST00000588074 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 PURBQ96QR8 312 aaKnown RBP7.1□□□□□ -1.27
LINC01538-201ENST00000588074 DMGDHQ9UI17 866 aaKnown RBP7.1□□□□□ -1.27
LINC01538-201ENST00000588074 PARNO95453 639 aaKnown RBP7.1□□□□□ -1.27
LINC01538-201ENST00000588074 ATP2B1P20020 1258 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 USP46P62068 366 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 CARD10Q9BWT7 1032 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 ZSWIM4Q9H7M6 989 aa7.1□□□□□ -1.27
LINC01538-201ENST00000588074 PSME1Q06323 249 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 TMC7Q7Z402 723 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 ZSCAN29Q8IWY8 852 aaPredicted RBP7.09□□□□□ -1.27
LINC01538-201ENST00000588074 PLPP7Q8NBV4 271 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 PTPROQ16827 1216 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
LINC01538-201ENST00000588074 ZSCAN20P17040 1043 aaPredicted RBP7.08□□□□□ -1.28
LINC01538-201ENST00000588074 PPP1R18Q6NYC8 613 aa7.08□□□□□ -1.28
LINC01538-201ENST00000588074 MAFGO15525 162 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
LINC01538-201ENST00000588074 EGFL6Q8IUX8 553 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 TATDN2Q93075 761 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 PARP2Q9UGN5 583 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 NCAPD3P42695 1498 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 FUT2Q10981 343 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 TGIF2Q9GZN2 237 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 CCSER2Q9H7U1 834 aa7.07□□□□□ -1.28
LINC01538-201ENST00000588074 hCG_2014768A0A024R1R8 64 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 PLEKHD1A6NEE1 506 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 SFI1A8K8P3 1242 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 TCERG1O14776 1098 aaKnown RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 ZBTB7BO15156 539 aaPredicted RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 MAP4K4O95819 1239 aaPredicted RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 ANAPC15P60006 121 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 COL19A1Q14993 1142 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 GPATCH11Q8N954 259 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 KCNB2Q92953 911 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 WWC3Q9ULE0 1092 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 TPD52L2O43399 206 aaKnown RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 OS9Q13438 667 aaPredicted RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 TRAF7Q6Q0C0 670 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 RNF135Q8IUD6 432 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 SLC43A3Q8NBI5 491 aa7.06□□□□□ -1.28
LINC01538-201ENST00000588074 DUSP9Q99956 384 aaKnown RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 DNAAF2Q9NVR5 837 aaKnown RBP7.06□□□□□ -1.28
LINC01538-201ENST00000588074 FKBP4Q02790 459 aaKnown RBP eCLIP7.05□□□□□ -1.28
LINC01538-201ENST00000588074 BMS1Q14692 1282 aaKnown RBP7.05□□□□□ -1.28
LINC01538-201ENST00000588074 NBPF11Q86T75 865 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms