RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 INSRP06213 1382 aa23.97■■□□□ 1.43
GCDH-206ENST00000587832 RRS1Q15050 365 aaKnown RBP23.97■■□□□ 1.43
GCDH-206ENST00000587832 MTFR1LQ9H019 292 aa23.97■■□□□ 1.43
GCDH-206ENST00000587832 FLT4P35916 1363 aa23.96■■□□□ 1.43
GCDH-206ENST00000587832 NSD2O96028 1365 aa23.95■■□□□ 1.42
GCDH-206ENST00000587832 SLC27A3Q5K4L6 730 aa23.95■■□□□ 1.42
GCDH-206ENST00000587832 ZCRB1Q8TBF4 217 aaKnown RBP23.95■■□□□ 1.42
GCDH-206ENST00000587832 PKD1L3Q7Z443 1732 aa23.95■■□□□ 1.42
GCDH-206ENST00000587832 SGIP1Q9BQI5 828 aa23.94■■□□□ 1.42
GCDH-206ENST00000587832 LRRC4BQ9NT99 713 aa23.94■■□□□ 1.42
GCDH-206ENST00000587832 NSD3Q9BZ95 1437 aa23.93■■□□□ 1.42
GCDH-206ENST00000587832 NBPF6Q5VWK0 638 aa23.93■■□□□ 1.42
GCDH-206ENST00000587832 NBPF4Q96M43 638 aa23.93■■□□□ 1.42
GCDH-206ENST00000587832 MAP2P11137 1827 aaKnown RBP23.92■■□□□ 1.42
GCDH-206ENST00000587832 DCAF8L1A6NGE4 600 aa23.92■■□□□ 1.42
GCDH-206ENST00000587832 ATF5Q9Y2D1 282 aaPredicted RBP23.92■■□□□ 1.42
GCDH-206ENST00000587832 ZNF827Q17R98 1081 aa23.91■■□□□ 1.42
GCDH-206ENST00000587832 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
GCDH-206ENST00000587832 AKT1S1Q96B36 256 aa23.9■■□□□ 1.42
GCDH-206ENST00000587832 NCAPD2Q15021 1401 aa23.9■■□□□ 1.42
GCDH-206ENST00000587832 PRIM1P49642 420 aaKnown RBP23.89■■□□□ 1.41
GCDH-206ENST00000587832 HSP90AB2PQ58FF8 381 aa23.89■■□□□ 1.41
GCDH-206ENST00000587832 RAPGEF4Q8WZA2 1011 aa23.89■■□□□ 1.41
GCDH-206ENST00000587832 TOGARAM1Q9Y4F4 1720 aa23.88■■□□□ 1.41
GCDH-206ENST00000587832 ITGB4P16144 1822 aa23.88■■□□□ 1.41
GCDH-206ENST00000587832 C5P01031 1676 aa23.88■■□□□ 1.41
GCDH-206ENST00000587832 MAP3K5Q99683 1374 aa23.88■■□□□ 1.41
GCDH-206ENST00000587832 SYTL4Q96C24 671 aaPredicted RBP23.87■■□□□ 1.41
GCDH-206ENST00000587832 TAF1LQ8IZX4 1826 aa23.87■■□□□ 1.41
GCDH-206ENST00000587832 YY1P25490 414 aa23.86■■□□□ 1.41
GCDH-206ENST00000587832 USHBP1Q8N6Y0 703 aa23.86■■□□□ 1.41
GCDH-206ENST00000587832 PCDH11XQ9BZA7 1347 aa23.85■■□□□ 1.41
GCDH-206ENST00000587832 PCDH11YQ9BZA8 1340 aa23.85■■□□□ 1.41
GCDH-206ENST00000587832 TATP17735 454 aaPredicted RBP23.85■■□□□ 1.41
GCDH-206ENST00000587832 SLC16A10Q8TF71 515 aa23.85■■□□□ 1.41
GCDH-206ENST00000587832 FHDC1Q9C0D6 1143 aaPredicted RBP23.85■■□□□ 1.41
GCDH-206ENST00000587832 SYT17Q9BSW7 474 aa23.84■■□□□ 1.41
GCDH-206ENST00000587832 CHD4Q14839 1912 aa23.84■■□□□ 1.41
GCDH-206ENST00000587832 EMILIN1Q9Y6C2 1016 aa23.83■■□□□ 1.41
GCDH-206ENST00000587832 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.4
GCDH-206ENST00000587832 ARXQ96QS3 562 aa23.82■■□□□ 1.4
GCDH-206ENST00000587832 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
GCDH-206ENST00000587832 WASHC2AQ641Q2 1341 aa23.8■■□□□ 1.4
GCDH-206ENST00000587832 TFCP2L1Q9NZI6 479 aa23.79■■□□□ 1.4
GCDH-206ENST00000587832 CCNL1Q9UK58 526 aaPredicted RBP23.79■■□□□ 1.4
GCDH-206ENST00000587832 KCNQ4P56696 695 aa23.77■■□□□ 1.4
GCDH-206ENST00000587832 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
GCDH-206ENST00000587832 CYP27B1O15528 508 aa23.76■■□□□ 1.39
GCDH-206ENST00000587832 HMGB2P26583 209 aaKnown RBP23.76■■□□□ 1.39
GCDH-206ENST00000587832 C4BP0C0L5 1744 aa23.74■■□□□ 1.39
GCDH-206ENST00000587832 PALLDQ8WX93 1383 aa23.74■■□□□ 1.39
GCDH-206ENST00000587832 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
GCDH-206ENST00000587832 POLD1P28340 1107 aa23.73■■□□□ 1.39
GCDH-206ENST00000587832 EIF4G2P78344 907 aaKnown RBP eCLIP23.73■■□□□ 1.39
GCDH-206ENST00000587832 NKX1-1Q15270 411 aaPredicted RBP23.73■■□□□ 1.39
GCDH-206ENST00000587832 UBR3Q6ZT12 1888 aa23.73■■□□□ 1.39
GCDH-206ENST00000587832 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.72■■□□□ 1.39
GCDH-206ENST00000587832 POLKQ9UBT6 870 aa23.72■■□□□ 1.39
GCDH-206ENST00000587832 SPG7Q9UQ90 795 aa23.71■■□□□ 1.39
GCDH-206ENST00000587832 EYA1Q99502 592 aa23.7■■□□□ 1.38
GCDH-206ENST00000587832 MPRIPQ6WCQ1 1025 aa23.69■■□□□ 1.38
GCDH-206ENST00000587832 SMARCC1Q92922 1105 aaPredicted RBP23.69■■□□□ 1.38
GCDH-206ENST00000587832 HSPA5P11021 654 aaKnown RBP23.68■■□□□ 1.38
GCDH-206ENST00000587832 COL23A1Q86Y22 540 aaPredicted RBP23.67■■□□□ 1.38
GCDH-206ENST00000587832 ZNF831Q5JPB2 1677 aa23.67■■□□□ 1.38
GCDH-206ENST00000587832 POLR3GLQ9BT43 218 aa23.66■■□□□ 1.38
GCDH-206ENST00000587832 EIF4A2Q14240 407 aaKnown RBP23.65■■□□□ 1.38
GCDH-206ENST00000587832 FLAD1Q8NFF5 587 aa23.65■■□□□ 1.38
GCDH-206ENST00000587832 UTRNP46939 3433 aa23.65■■□□□ 1.38
GCDH-206ENST00000587832 PIGBQ92521 554 aa23.64■■□□□ 1.37
GCDH-206ENST00000587832 IGSF1Q8N6C5 1336 aa23.63■■□□□ 1.37
GCDH-206ENST00000587832 PHKG2P15735 406 aa23.62■■□□□ 1.37
GCDH-206ENST00000587832 IFNL2Q8IZJ0 200 aa23.62■■□□□ 1.37
GCDH-206ENST00000587832 PANK3Q9H999 370 aa23.62■■□□□ 1.37
GCDH-206ENST00000587832 MSH5O43196 834 aa23.61■■□□□ 1.37
GCDH-206ENST00000587832 CCER1Q8TC90 406 aaPredicted RBP23.61■■□□□ 1.37
GCDH-206ENST00000587832 TNNT2P45379 298 aaPredicted RBP23.6■■□□□ 1.37
GCDH-206ENST00000587832 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
GCDH-206ENST00000587832 GPR162Q16538 588 aa23.59■■□□□ 1.37
GCDH-206ENST00000587832 KLHL34Q8N239 644 aa23.59■■□□□ 1.37
GCDH-206ENST00000587832 ZNF784Q8NCA9 323 aaPredicted RBP23.59■■□□□ 1.37
GCDH-206ENST00000587832 COL5A3P25940 1745 aaPredicted RBP23.59■■□□□ 1.37
GCDH-206ENST00000587832 NLGN2Q8NFZ4 835 aa23.58■■□□□ 1.37
GCDH-206ENST00000587832 AK7Q96M32 723 aa23.58■■□□□ 1.37
GCDH-206ENST00000587832 LOC102724428A0A0B4J2F2 783 aa23.57■■□□□ 1.36
GCDH-206ENST00000587832 SIK1P57059 783 aa23.57■■□□□ 1.36
GCDH-206ENST00000587832 KDRP35968 1356 aa23.55■■□□□ 1.36
GCDH-206ENST00000587832 MSL1Q68DK7 614 aa23.55■■□□□ 1.36
GCDH-206ENST00000587832 SSFA2P28290 1259 aa23.54■■□□□ 1.36
GCDH-206ENST00000587832 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
GCDH-206ENST00000587832 CICQ96RK0 1608 aaPredicted RBP23.53■■□□□ 1.36
GCDH-206ENST00000587832 AMIGO3Q86WK7 504 aa23.53■■□□□ 1.36
GCDH-206ENST00000587832 CD2APQ9Y5K6 639 aa23.53■■□□□ 1.36
GCDH-206ENST00000587832 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.52■■□□□ 1.36
GCDH-206ENST00000587832 ERVV-2B6SEH9 535 aa23.52■■□□□ 1.36
GCDH-206ENST00000587832 HSP90AB1P08238 724 aaKnown RBP23.52■■□□□ 1.36
GCDH-206ENST00000587832 MORC1Q86VD1 984 aa23.52■■□□□ 1.36
GCDH-206ENST00000587832 LINC00116Q8NCU8 138 aa23.52■■□□□ 1.36
GCDH-206ENST00000587832 ATG3Q9NT62 314 aa23.52■■□□□ 1.36
GCDH-206ENST00000587832 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms