RNA–Protein interactions for RNA: ENST00000587323.5

CIRBP-213, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-213ENST00000587323 DEFB132Q7Z7B7 95 aa26.79■■□□□ 1.88
CIRBP-213ENST00000587323 MEGF6O75095 1541 aa26.79■■□□□ 1.88
CIRBP-213ENST00000587323 IGSF1Q8N6C5 1336 aa26.77■■□□□ 1.88
CIRBP-213ENST00000587323 IL13P35225 146 aa26.77■■□□□ 1.88
CIRBP-213ENST00000587323 BCL11BQ9C0K0 894 aaPredicted RBP26.77■■□□□ 1.88
CIRBP-213ENST00000587323 PCDH11XQ9BZA7 1347 aa26.76■■□□□ 1.87
CIRBP-213ENST00000587323 PCDH11YQ9BZA8 1340 aa26.76■■□□□ 1.87
CIRBP-213ENST00000587323 PPP2R1AP30153 589 aa26.76■■□□□ 1.87
CIRBP-213ENST00000587323 ACSBG1Q96GR2 724 aa26.76■■□□□ 1.87
CIRBP-213ENST00000587323 BCL9O00512 1426 aa26.75■■□□□ 1.87
CIRBP-213ENST00000587323 EN1Q05925 392 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-213ENST00000587323 SULT6B1Q6IMI4 303 aa26.75■■□□□ 1.87
CIRBP-213ENST00000587323 SBF2Q86WG5 1849 aa26.74■■□□□ 1.87
CIRBP-213ENST00000587323 PLEKHO1Q53GL0 409 aaPredicted RBP26.73■■□□□ 1.87
CIRBP-213ENST00000587323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.73■■□□□ 1.874e-13■□□□□ 8.8
CIRBP-213ENST00000587323 NUDCQ9Y266 331 aa26.73■■□□□ 1.87
CIRBP-213ENST00000587323 NCAPD2Q15021 1401 aa26.73■■□□□ 1.87
CIRBP-213ENST00000587323 U2SURPO15042 1029 aaKnown RBP26.72■■□□□ 1.87
CIRBP-213ENST00000587323 RALBP1Q15311 655 aa26.72■■□□□ 1.87
CIRBP-213ENST00000587323 SYTL4Q96C24 671 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-213ENST00000587323 TNS1Q9HBL0 1735 aaKnown RBP26.7■■□□□ 1.87
CIRBP-213ENST00000587323 AMOTQ4VCS5 1084 aa26.7■■□□□ 1.86
CIRBP-213ENST00000587323 HMOX1P09601 288 aa26.68■■□□□ 1.86
CIRBP-213ENST00000587323 EZH2Q15910 746 aaKnown RBP26.68■■□□□ 1.86
CIRBP-213ENST00000587323 IFNL2Q8IZJ0 200 aa26.68■■□□□ 1.86
CIRBP-213ENST00000587323 KCNQ2O43526 872 aa26.67■■□□□ 1.86
CIRBP-213ENST00000587323 AEBP1Q8IUX7 1158 aa26.67■■□□□ 1.86
CIRBP-213ENST00000587323 PARD3Q8TEW0 1356 aa26.67■■□□□ 1.86
CIRBP-213ENST00000587323 PLSCR1O15162 318 aa26.66■■□□□ 1.86
CIRBP-213ENST00000587323 PLEKHG2Q9H7P9 1386 aa26.66■■□□□ 1.86
CIRBP-213ENST00000587323 SHANK3Q9BYB0 1731 aa26.65■■□□□ 1.86
CIRBP-213ENST00000587323 PRIM1P49642 420 aaKnown RBP26.65■■□□□ 1.86
CIRBP-213ENST00000587323 CAMKK2Q96RR4 588 aa26.65■■□□□ 1.86
CIRBP-213ENST00000587323 PKD1L3Q7Z443 1732 aa26.65■■□□□ 1.86
CIRBP-213ENST00000587323 CYP27B1O15528 508 aa26.64■■□□□ 1.86
CIRBP-213ENST00000587323 C1orf141Q5JVX7 400 aa26.64■■□□□ 1.86
CIRBP-213ENST00000587323 HSP90AB1P08238 724 aaKnown RBP26.63■■□□□ 1.85
CIRBP-213ENST00000587323 PTF1AQ7RTS3 328 aa26.63■■□□□ 1.85
CIRBP-213ENST00000587323 NHSQ6T4R5 1651 aa26.63■■□□□ 1.85
CIRBP-213ENST00000587323 ZNF530Q6P9A1 599 aaPredicted RBP26.62■■□□□ 1.85
CIRBP-213ENST00000587323 KDRP35968 1356 aa26.61■■□□□ 1.85
CIRBP-213ENST00000587323 PHKG2P15735 406 aa26.61■■□□□ 1.85
CIRBP-213ENST00000587323 U2AF1L5P0DN76 240 aaPredicted RBP26.6■■□□□ 1.85
CIRBP-213ENST00000587323 U2AF1Q01081 240 aaKnown RBP eCLIP26.6■■□□□ 1.85
CIRBP-213ENST00000587323 NBPF14Q5TI25 921 aa26.6■■□□□ 1.85
CIRBP-213ENST00000587323 NKX1-1Q15270 411 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-213ENST00000587323 COL3A1P02461 1466 aaPredicted RBP26.59■■□□□ 1.85
CIRBP-213ENST00000587323 DOT1LQ8TEK3 1739 aa26.59■■□□□ 1.85
CIRBP-213ENST00000587323 MPRIPQ6WCQ1 1025 aa26.58■■□□□ 1.85
CIRBP-213ENST00000587323 MYBBP1AQ9BQG0 1328 aaKnown RBP26.58■■□□□ 1.85
CIRBP-213ENST00000587323 BTAF1O14981 1849 aa26.56■■□□□ 1.84
CIRBP-213ENST00000587323 NEFMP07197 916 aa26.56■■□□□ 1.84
CIRBP-213ENST00000587323 LRP5O75197 1615 aa26.55■■□□□ 1.84
CIRBP-213ENST00000587323 TXNRD1Q16881 649 aa26.54■■□□□ 1.84
CIRBP-213ENST00000587323 DCAF5Q96JK2 942 aa26.54■■□□□ 1.84
CIRBP-213ENST00000587323 PRKRIP1Q9H875 184 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-213ENST00000587323 TMOD3Q9NYL9 352 aa26.53■■□□□ 1.84
CIRBP-213ENST00000587323 RGPD3A6NKT7 1758 aaPredicted RBP26.53■■□□□ 1.84
CIRBP-213ENST00000587323 RGPD4Q7Z3J3 1758 aa26.53■■□□□ 1.84
CIRBP-213ENST00000587323 AKAP4Q5JQC9 854 aa26.52■■□□□ 1.84
CIRBP-213ENST00000587323 PNNQ9H307 717 aaKnown RBP26.52■■□□□ 1.84
CIRBP-213ENST00000587323 FCHSD2O94868 740 aa26.51■■□□□ 1.83
CIRBP-213ENST00000587323 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
CIRBP-213ENST00000587323 PRKAR2BP31323 418 aa26.5■■□□□ 1.83
CIRBP-213ENST00000587323 GAS2L2Q8NHY3 880 aa26.5■■□□□ 1.83
CIRBP-213ENST00000587323 PSDA5PKW4 1024 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-213ENST00000587323 HMGB2P26583 209 aaKnown RBP26.49■■□□□ 1.83
CIRBP-213ENST00000587323 CABP4P57796 275 aa26.49■■□□□ 1.83
CIRBP-213ENST00000587323 MTHFSDQ2M296 383 aaKnown RBP26.49■■□□□ 1.83
CIRBP-213ENST00000587323 SMARCC1Q92922 1105 aaPredicted RBP26.49■■□□□ 1.83
CIRBP-213ENST00000587323 ITGB4P16144 1822 aa26.49■■□□□ 1.83
CIRBP-213ENST00000587323 ANP32CO43423 234 aa26.48■■□□□ 1.83
CIRBP-213ENST00000587323 RREB1Q92766 1687 aa26.47■■□□□ 1.83
CIRBP-213ENST00000587323 SLC27A3Q5K4L6 730 aa26.47■■□□□ 1.83
CIRBP-213ENST00000587323 RSPH6AQ9H0K4 717 aa26.47■■□□□ 1.83
CIRBP-213ENST00000587323 PROM2Q8N271 834 aa26.46■■□□□ 1.83
CIRBP-213ENST00000587323 PIGBQ92521 554 aa26.46■■□□□ 1.83
CIRBP-213ENST00000587323 R3HDM1Q15032 1099 aaKnown RBP26.45■■□□□ 1.82
CIRBP-213ENST00000587323 STK32BQ9NY57 414 aa26.45■■□□□ 1.82
CIRBP-213ENST00000587323 NUP188Q5SRE5 1749 aa26.44■■□□□ 1.82
CIRBP-213ENST00000587323 TOGARAM1Q9Y4F4 1720 aa26.43■■□□□ 1.82
CIRBP-213ENST00000587323 WDR43Q15061 677 aaKnown RBP eCLIP26.43■■□□□ 1.82
CIRBP-213ENST00000587323 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
CIRBP-213ENST00000587323 GNAT3A8MTJ3 354 aa26.42■■□□□ 1.82
CIRBP-213ENST00000587323 MAPK8IP3Q9UPT6 1336 aa26.4■■□□□ 1.82
CIRBP-213ENST00000587323 RNMTO43148 476 aaKnown RBP26.4■■□□□ 1.82
CIRBP-213ENST00000587323 NFATC2IPQ8NCF5 419 aa26.4■■□□□ 1.82
CIRBP-213ENST00000587323 RTF1Q92541 710 aaKnown RBP26.4■■□□□ 1.82
CIRBP-213ENST00000587323 PHACTR3Q96KR7 559 aa26.4■■□□□ 1.82
CIRBP-213ENST00000587323 PALLDQ8WX93 1383 aa26.4■■□□□ 1.82
CIRBP-213ENST00000587323 LGR6Q9HBX8 967 aa26.38■■□□□ 1.81
CIRBP-213ENST00000587323 KDM6AO15550 1401 aaPredicted RBP26.38■■□□□ 1.81
CIRBP-213ENST00000587323 SCN11AQ9UI33 1791 aa26.38■■□□□ 1.81
CIRBP-213ENST00000587323 MAP3K5Q99683 1374 aa26.37■■□□□ 1.81
CIRBP-213ENST00000587323 ASAP1Q9ULH1 1129 aa26.37■■□□□ 1.81
CIRBP-213ENST00000587323 LY75O60449 1722 aa26.36■■□□□ 1.81
CIRBP-213ENST00000587323 TEFQ10587 303 aa26.36■■□□□ 1.81
CIRBP-213ENST00000587323 SLC15A2Q16348 729 aa26.36■■□□□ 1.81
CIRBP-213ENST00000587323 LRRC4BQ9NT99 713 aa26.36■■□□□ 1.81
CIRBP-213ENST00000587323 KCNQ4P56696 695 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms