RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
PRKCSH-204ENST00000587290 NSD2O96028 1365 aa21.23■□□□□ 0.99
PRKCSH-204ENST00000587290 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
PRKCSH-204ENST00000587290 NSD3Q9BZ95 1437 aa21.22■□□□□ 0.99
PRKCSH-204ENST00000587290 CARD14Q9BXL6 1004 aa21.22■□□□□ 0.99
PRKCSH-204ENST00000587290 QSER1Q2KHR3 1735 aa21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 YY1P25490 414 aa21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 HSP90AB2PQ58FF8 381 aa21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 PCGF6Q9BYE7 350 aa21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
PRKCSH-204ENST00000587290 SGIP1Q9BQI5 828 aa21.2■□□□□ 0.98
PRKCSH-204ENST00000587290 FHDC1Q9C0D6 1143 aaPredicted RBP21.2■□□□□ 0.98
PRKCSH-204ENST00000587290 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
PRKCSH-204ENST00000587290 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
PRKCSH-204ENST00000587290 MAP2P11137 1827 aaKnown RBP21.18■□□□□ 0.98
PRKCSH-204ENST00000587290 EMILIN1Q9Y6C2 1016 aa21.18■□□□□ 0.98
PRKCSH-204ENST00000587290 ANKRD26Q9UPS8 1709 aa21.18■□□□□ 0.98
PRKCSH-204ENST00000587290 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
PRKCSH-204ENST00000587290 INSRP06213 1382 aa21.17■□□□□ 0.98
PRKCSH-204ENST00000587290 FLT4P35916 1363 aa21.17■□□□□ 0.98
PRKCSH-204ENST00000587290 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
PRKCSH-204ENST00000587290 SYT17Q9BSW7 474 aa21.16■□□□□ 0.98
PRKCSH-204ENST00000587290 ITGB4P16144 1822 aa21.15■□□□□ 0.98
PRKCSH-204ENST00000587290 RAPGEF4Q8WZA2 1011 aa21.15■□□□□ 0.98
PRKCSH-204ENST00000587290 POLR3GLQ9BT43 218 aa21.15■□□□□ 0.98
PRKCSH-204ENST00000587290 PNPLA7Q6ZV29 1317 aa21.14■□□□□ 0.97
PRKCSH-204ENST00000587290 DCAF8L1A6NGE4 600 aa21.14■□□□□ 0.97
PRKCSH-204ENST00000587290 SLC27A3Q5K4L6 730 aa21.14■□□□□ 0.97
PRKCSH-204ENST00000587290 PKD1L3Q7Z443 1732 aa21.14■□□□□ 0.97
PRKCSH-204ENST00000587290 COL24A1Q17RW2 1714 aa21.13■□□□□ 0.97
PRKCSH-204ENST00000587290 C5P01031 1676 aa21.13■□□□□ 0.97
PRKCSH-204ENST00000587290 PPM1GO15355 546 aaPredicted RBP21.13■□□□□ 0.97
PRKCSH-204ENST00000587290 ARXQ96QS3 562 aa21.13■□□□□ 0.97
PRKCSH-204ENST00000587290 TATP17735 454 aaPredicted RBP21.12■□□□□ 0.97
PRKCSH-204ENST00000587290 TAF1LQ8IZX4 1826 aa21.12■□□□□ 0.97
PRKCSH-204ENST00000587290 TFCP2L1Q9NZI6 479 aa21.11■□□□□ 0.97
PRKCSH-204ENST00000587290 CCNL1Q9UK58 526 aaPredicted RBP21.11■□□□□ 0.97
PRKCSH-204ENST00000587290 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
PRKCSH-204ENST00000587290 GOLGB1Q14789 3259 aaKnown RBP21.1■□□□□ 0.97
PRKCSH-204ENST00000587290 CHD4Q14839 1912 aa21.1■□□□□ 0.97
PRKCSH-204ENST00000587290 CGNL1Q0VF96 1302 aa21.09■□□□□ 0.97
PRKCSH-204ENST00000587290 CYP27B1O15528 508 aa21.09■□□□□ 0.97
PRKCSH-204ENST00000587290 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
PRKCSH-204ENST00000587290 PCDH11XQ9BZA7 1347 aa21.08■□□□□ 0.97
PRKCSH-204ENST00000587290 PCDH11YQ9BZA8 1340 aa21.08■□□□□ 0.97
PRKCSH-204ENST00000587290 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
PRKCSH-204ENST00000587290 TNNT2P45379 298 aaPredicted RBP21.06■□□□□ 0.96
PRKCSH-204ENST00000587290 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
PRKCSH-204ENST00000587290 TIMELESSQ9UNS1 1208 aa21.06■□□□□ 0.96
PRKCSH-204ENST00000587290 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
PRKCSH-204ENST00000587290 PALLDQ8WX93 1383 aa21.04■□□□□ 0.96
PRKCSH-204ENST00000587290 MAP3K5Q99683 1374 aa21.03■□□□□ 0.96
PRKCSH-204ENST00000587290 MSH5O43196 834 aa21.03■□□□□ 0.96
PRKCSH-204ENST00000587290 MSL1Q68DK7 614 aa21.03■□□□□ 0.96
PRKCSH-204ENST00000587290 COL23A1Q86Y22 540 aaPredicted RBP21.03■□□□□ 0.96
PRKCSH-204ENST00000587290 C4BP0C0L5 1744 aa21.02■□□□□ 0.96
PRKCSH-204ENST00000587290 HSPA5P11021 654 aaKnown RBP21.02■□□□□ 0.96
PRKCSH-204ENST00000587290 SLC16A10Q8TF71 515 aa21.02■□□□□ 0.96
PRKCSH-204ENST00000587290 EYA1Q99502 592 aa21.02■□□□□ 0.96
PRKCSH-204ENST00000587290 POLKQ9UBT6 870 aa21.02■□□□□ 0.96
PRKCSH-204ENST00000587290 WASHC2AQ641Q2 1341 aa21.02■□□□□ 0.95
PRKCSH-204ENST00000587290 POLD1P28340 1107 aa21.01■□□□□ 0.95
PRKCSH-204ENST00000587290 NLGN2Q8NFZ4 835 aa21.01■□□□□ 0.95
PRKCSH-204ENST00000587290 SMIM5Q71RC9 77 aa21■□□□□ 0.95
PRKCSH-204ENST00000587290 UBR3Q6ZT12 1888 aa21■□□□□ 0.95
PRKCSH-204ENST00000587290 PELP1Q8IZL8 1130 aaKnown RBP20.99■□□□□ 0.95
PRKCSH-204ENST00000587290 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.95
PRKCSH-204ENST00000587290 EIF4A2Q14240 407 aaKnown RBP20.98■□□□□ 0.95
PRKCSH-204ENST00000587290 AMIGO3Q86WK7 504 aa20.98■□□□□ 0.95
PRKCSH-204ENST00000587290 PIGBQ92521 554 aa20.98■□□□□ 0.95
PRKCSH-204ENST00000587290 ZNF784Q8NCA9 323 aaPredicted RBP20.97■□□□□ 0.95
PRKCSH-204ENST00000587290 GPR162Q16538 588 aa20.96■□□□□ 0.95
PRKCSH-204ENST00000587290 CCER1Q8TC90 406 aaPredicted RBP20.96■□□□□ 0.95
PRKCSH-204ENST00000587290 PANK3Q9H999 370 aa20.96■□□□□ 0.95
PRKCSH-204ENST00000587290 SPG7Q9UQ90 795 aa20.95■□□□□ 0.94
PRKCSH-204ENST00000587290 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
PRKCSH-204ENST00000587290 PHF14O94880 888 aa20.93■□□□□ 0.94
PRKCSH-204ENST00000587290 PHKG2P15735 406 aa20.92■□□□□ 0.94
PRKCSH-204ENST00000587290 ASAP1Q9ULH1 1129 aa20.92■□□□□ 0.94
PRKCSH-204ENST00000587290 LINC00116Q8NCU8 138 aa20.91■□□□□ 0.94
PRKCSH-204ENST00000587290 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
PRKCSH-204ENST00000587290 AK7Q96M32 723 aa20.91■□□□□ 0.94
PRKCSH-204ENST00000587290 TMOD3Q9NYL9 352 aa20.9■□□□□ 0.94
PRKCSH-204ENST00000587290 IGSF1Q8N6C5 1336 aa20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 LOC102724428A0A0B4J2F2 783 aa20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 YBX3P16989 372 aaKnown RBP eCLIP20.89■□□□□ 0.938e-10■□□□□ 8.8
PRKCSH-204ENST00000587290 SIK1P57059 783 aa20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 ITPK1Q13572 414 aa20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.89■□□□□ 0.93
PRKCSH-204ENST00000587290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-204ENST00000587290 AEBP1Q8IUX7 1158 aa20.87■□□□□ 0.93
PRKCSH-204ENST00000587290 ATG3Q9NT62 314 aa20.86■□□□□ 0.93
PRKCSH-204ENST00000587290 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
PRKCSH-204ENST00000587290 FLAD1Q8NFF5 587 aa20.85■□□□□ 0.93
PRKCSH-204ENST00000587290 WWC3Q9ULE0 1092 aa20.85■□□□□ 0.93
PRKCSH-204ENST00000587290 KDM6AO15550 1401 aaPredicted RBP20.85■□□□□ 0.93
PRKCSH-204ENST00000587290 COL5A3P25940 1745 aaPredicted RBP20.84■□□□□ 0.93
PRKCSH-204ENST00000587290 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms