RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
H3F3B-205ENST00000587171 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
H3F3B-205ENST00000587171 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
H3F3B-205ENST00000587171 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
H3F3B-205ENST00000587171 CASZ1Q86V15 1759 aa18.19■□□□□ 0.5
H3F3B-205ENST00000587171 NCAPD2Q15021 1401 aa18.18■□□□□ 0.5
H3F3B-205ENST00000587171 PANK3Q9H999 370 aa18.18■□□□□ 0.5
H3F3B-205ENST00000587171 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
H3F3B-205ENST00000587171 RAPGEF4Q8WZA2 1011 aa18.17■□□□□ 0.5
H3F3B-205ENST00000587171 WASHC2AQ641Q2 1341 aa18.17■□□□□ 0.5
H3F3B-205ENST00000587171 PKD1L3Q7Z443 1732 aa18.16■□□□□ 0.5
H3F3B-205ENST00000587171 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
H3F3B-205ENST00000587171 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-205ENST00000587171 TATP17735 454 aaPredicted RBP18.15■□□□□ 0.5
H3F3B-205ENST00000587171 NSD2O96028 1365 aa18.15■□□□□ 0.5
H3F3B-205ENST00000587171 LY75O60449 1722 aa18.14■□□□□ 0.49
H3F3B-205ENST00000587171 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
H3F3B-205ENST00000587171 SPON1Q9HCB6 807 aa18.13■□□□□ 0.49
H3F3B-205ENST00000587171 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
H3F3B-205ENST00000587171 PRIM1P49642 420 aaKnown RBP18.12■□□□□ 0.49
H3F3B-205ENST00000587171 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
H3F3B-205ENST00000587171 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
H3F3B-205ENST00000587171 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
H3F3B-205ENST00000587171 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
H3F3B-205ENST00000587171 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
H3F3B-205ENST00000587171 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
H3F3B-205ENST00000587171 EYA1Q99502 592 aa18.1■□□□□ 0.49
H3F3B-205ENST00000587171 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
H3F3B-205ENST00000587171 ITGB4P16144 1822 aa18.09■□□□□ 0.49
H3F3B-205ENST00000587171 TOGARAM1Q9Y4F4 1720 aa18.09■□□□□ 0.49
H3F3B-205ENST00000587171 SLC27A3Q5K4L6 730 aa18.09■□□□□ 0.49
H3F3B-205ENST00000587171 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
H3F3B-205ENST00000587171 CYP27B1O15528 508 aa18.08■□□□□ 0.48
H3F3B-205ENST00000587171 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
H3F3B-205ENST00000587171 KNSTRNQ9Y448 316 aa18.07■□□□□ 0.48
H3F3B-205ENST00000587171 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
H3F3B-205ENST00000587171 ZNF827Q17R98 1081 aa18.06■□□□□ 0.48
H3F3B-205ENST00000587171 PLEKHG2Q9H7P9 1386 aa18.05■□□□□ 0.48
H3F3B-205ENST00000587171 ZBTB7AO95365 584 aa18.05■□□□□ 0.48
H3F3B-205ENST00000587171 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
H3F3B-205ENST00000587171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.05■□□□□ 0.48
H3F3B-205ENST00000587171 UTRNP46939 3433 aa18.05■□□□□ 0.48
H3F3B-205ENST00000587171 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
H3F3B-205ENST00000587171 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-205ENST00000587171 AKT1S1Q96B36 256 aa18.04■□□□□ 0.48
H3F3B-205ENST00000587171 PPP1R1BQ9UD71 204 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-205ENST00000587171 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
H3F3B-205ENST00000587171 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-205ENST00000587171 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.48
H3F3B-205ENST00000587171 PTGER2P43116 358 aa18.02■□□□□ 0.48
H3F3B-205ENST00000587171 KCNQ4P56696 695 aa18.02■□□□□ 0.48
H3F3B-205ENST00000587171 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
H3F3B-205ENST00000587171 C5P01031 1676 aa18.02■□□□□ 0.47
H3F3B-205ENST00000587171 CCNL1Q9UK58 526 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-205ENST00000587171 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
H3F3B-205ENST00000587171 PER1O15534 1290 aaPredicted RBP18■□□□□ 0.47
H3F3B-205ENST00000587171 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
H3F3B-205ENST00000587171 COL24A1Q17RW2 1714 aa18■□□□□ 0.47
H3F3B-205ENST00000587171 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
H3F3B-205ENST00000587171 PALLDQ8WX93 1383 aa17.99■□□□□ 0.47
H3F3B-205ENST00000587171 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
H3F3B-205ENST00000587171 PHKG2P15735 406 aa17.98■□□□□ 0.47
H3F3B-205ENST00000587171 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
H3F3B-205ENST00000587171 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
H3F3B-205ENST00000587171 PIGBQ92521 554 aa17.97■□□□□ 0.47
H3F3B-205ENST00000587171 TFCP2L1Q9NZI6 479 aa17.97■□□□□ 0.47
H3F3B-205ENST00000587171 SLC16A10Q8TF71 515 aa17.96■□□□□ 0.47
H3F3B-205ENST00000587171 KDRP35968 1356 aa17.95■□□□□ 0.46
H3F3B-205ENST00000587171 SMARCC1Q92922 1105 aaPredicted RBP17.95■□□□□ 0.46
H3F3B-205ENST00000587171 NPC1L1Q9UHC9 1359 aa17.94■□□□□ 0.46
H3F3B-205ENST00000587171 IL13P35225 146 aa17.94■□□□□ 0.46
H3F3B-205ENST00000587171 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
H3F3B-205ENST00000587171 C4BP0C0L5 1744 aa17.93■□□□□ 0.46
H3F3B-205ENST00000587171 HMGB2P26583 209 aaKnown RBP17.93■□□□□ 0.46
H3F3B-205ENST00000587171 TMOD3Q9NYL9 352 aa17.93■□□□□ 0.46
H3F3B-205ENST00000587171 MTHFSP49914 203 aa17.92■□□□□ 0.46
H3F3B-205ENST00000587171 AMOTQ4VCS5 1084 aa17.92■□□□□ 0.46
H3F3B-205ENST00000587171 PLEKHO1Q53GL0 409 aaPredicted RBP17.92■□□□□ 0.46
H3F3B-205ENST00000587171 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
H3F3B-205ENST00000587171 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
H3F3B-205ENST00000587171 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
H3F3B-205ENST00000587171 ARXQ96QS3 562 aa17.91■□□□□ 0.46
H3F3B-205ENST00000587171 FHDC1Q9C0D6 1143 aaPredicted RBP17.91■□□□□ 0.46
H3F3B-205ENST00000587171 HSP90AB1P08238 724 aaKnown RBP17.9■□□□□ 0.46
H3F3B-205ENST00000587171 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
H3F3B-205ENST00000587171 DCAF5Q96JK2 942 aa17.9■□□□□ 0.46
H3F3B-205ENST00000587171 SYT17Q9BSW7 474 aa17.9■□□□□ 0.46
H3F3B-205ENST00000587171 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
H3F3B-205ENST00000587171 KDM6AO15550 1401 aaPredicted RBP17.89■□□□□ 0.46
H3F3B-205ENST00000587171 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 SIK1P57059 783 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 COL23A1Q86Y22 540 aaPredicted RBP17.89■□□□□ 0.45
H3F3B-205ENST00000587171 ASAP1Q9ULH1 1129 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 ZNF831Q5JPB2 1677 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 SCN11AQ9UI33 1791 aa17.89■□□□□ 0.45
H3F3B-205ENST00000587171 VIRMAQ69YN4 1812 aaKnown RBP17.88■□□□□ 0.45
H3F3B-205ENST00000587171 POLD1P28340 1107 aa17.87■□□□□ 0.45
H3F3B-205ENST00000587171 ATG3Q9NT62 314 aa17.87■□□□□ 0.45
H3F3B-205ENST00000587171 COL3A1P02461 1466 aaPredicted RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms