RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 PTF1AQ7RTS3 328 aa32.79■■■□□ 2.84
ERCC2-209ENST00000586856 CAMKK2Q96RR4 588 aa32.79■■■□□ 2.84
ERCC2-209ENST00000586856 BCL11BQ9C0K0 894 aaPredicted RBP32.79■■■□□ 2.84
ERCC2-209ENST00000586856 PKD1L3Q7Z443 1732 aa32.78■■■□□ 2.84
ERCC2-209ENST00000586856 NUP188Q5SRE5 1749 aa32.77■■■□□ 2.84
ERCC2-209ENST00000586856 TATP17735 454 aaPredicted RBP32.77■■■□□ 2.84
ERCC2-209ENST00000586856 ZCRB1Q8TBF4 217 aaKnown RBP32.77■■■□□ 2.84
ERCC2-209ENST00000586856 DDX54Q8TDD1 881 aaKnown RBP32.77■■■□□ 2.84
ERCC2-209ENST00000586856 EYA1Q99502 592 aa32.77■■■□□ 2.84
ERCC2-209ENST00000586856 DOT1LQ8TEK3 1739 aa32.77■■■□□ 2.84
ERCC2-209ENST00000586856 KAT6BQ8WYB5 2073 aa32.73■■■□□ 2.83
ERCC2-209ENST00000586856 ACSBG1Q96GR2 724 aa32.73■■■□□ 2.83
ERCC2-209ENST00000586856 BTAF1O14981 1849 aa32.72■■■□□ 2.83
ERCC2-209ENST00000586856 KCNQ2O43526 872 aa32.71■■■□□ 2.83
ERCC2-209ENST00000586856 CNGB1Q14028 1251 aaPredicted RBP32.7■■■□□ 2.83
ERCC2-209ENST00000586856 IGSF1Q8N6C5 1336 aa32.7■■■□□ 2.82
ERCC2-209ENST00000586856 PCDH11XQ9BZA7 1347 aa32.68■■■□□ 2.82
ERCC2-209ENST00000586856 PCDH11YQ9BZA8 1340 aa32.68■■■□□ 2.82
ERCC2-209ENST00000586856 PLSCR1O15162 318 aa32.66■■■□□ 2.82
ERCC2-209ENST00000586856 MTHFSP49914 203 aa32.65■■■□□ 2.82
ERCC2-209ENST00000586856 PLEKHG2Q9H7P9 1386 aa32.61■■■□□ 2.81
ERCC2-209ENST00000586856 TOGARAM1Q9Y4F4 1720 aa32.61■■■□□ 2.81
ERCC2-209ENST00000586856 PSDA5PKW4 1024 aaPredicted RBP32.6■■■□□ 2.81
ERCC2-209ENST00000586856 CYP27B1O15528 508 aa32.6■■■□□ 2.81
ERCC2-209ENST00000586856 IL13P35225 146 aa32.6■■■□□ 2.81
ERCC2-209ENST00000586856 SPG7Q9UQ90 795 aa32.59■■■□□ 2.81
ERCC2-209ENST00000586856 ZEB1P37275 1124 aaPredicted RBP32.58■■■□□ 2.81
ERCC2-209ENST00000586856 COL3A1P02461 1466 aaPredicted RBP32.58■■■□□ 2.81
ERCC2-209ENST00000586856 SYTL4Q96C24 671 aaPredicted RBP32.57■■■□□ 2.8
ERCC2-209ENST00000586856 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.57■■■□□ 2.8
ERCC2-209ENST00000586856 PRIM1P49642 420 aaKnown RBP32.56■■■□□ 2.8
ERCC2-209ENST00000586856 AEBP1Q8IUX7 1158 aa32.56■■■□□ 2.8
ERCC2-209ENST00000586856 R3HDM1Q15032 1099 aaKnown RBP32.55■■■□□ 2.8
ERCC2-209ENST00000586856 PROM2Q8N271 834 aa32.55■■■□□ 2.8
ERCC2-209ENST00000586856 KDRP35968 1356 aa32.55■■■□□ 2.8
ERCC2-209ENST00000586856 TXNRD1Q16881 649 aa32.54■■■□□ 2.8
ERCC2-209ENST00000586856 ITGB4P16144 1822 aa32.54■■■□□ 2.8
ERCC2-209ENST00000586856 NBPF14Q5TI25 921 aa32.52■■■□□ 2.8
ERCC2-209ENST00000586856 SULT6B1Q6IMI4 303 aa32.52■■■□□ 2.8
ERCC2-209ENST00000586856 LY75O60449 1722 aa32.51■■■□□ 2.79
ERCC2-209ENST00000586856 DIAPH1O60610 1272 aaKnown RBP32.5■■■□□ 2.79
ERCC2-209ENST00000586856 PAPPAQ13219 1627 aa32.49■■■□□ 2.79
ERCC2-209ENST00000586856 NKX1-1Q15270 411 aaPredicted RBP32.49■■■□□ 2.79
ERCC2-209ENST00000586856 PHKG2P15735 406 aa32.48■■■□□ 2.79
ERCC2-209ENST00000586856 ANO8Q9HCE9 1232 aaPredicted RBP32.48■■■□□ 2.79
ERCC2-209ENST00000586856 IFNL2Q8IZJ0 200 aa32.47■■■□□ 2.79
ERCC2-209ENST00000586856 PLEKHO1Q53GL0 409 aaPredicted RBP32.46■■■□□ 2.79
ERCC2-209ENST00000586856 LRP5O75197 1615 aa32.45■■■□□ 2.79
ERCC2-209ENST00000586856 PPP2R1AP30153 589 aa32.45■■■□□ 2.79
ERCC2-209ENST00000586856 AMOTQ4VCS5 1084 aa32.44■■■□□ 2.78
ERCC2-209ENST00000586856 SRCAPQ6ZRS2 3230 aa32.42■■■□□ 2.78
ERCC2-209ENST00000586856 HMOX1P09601 288 aa32.42■■■□□ 2.78
ERCC2-209ENST00000586856 ZNF530Q6P9A1 599 aaPredicted RBP32.42■■■□□ 2.78
ERCC2-209ENST00000586856 MPRIPQ6WCQ1 1025 aa32.41■■■□□ 2.78
ERCC2-209ENST00000586856 CFAP53Q96M91 514 aa32.41■■■□□ 2.78
ERCC2-209ENST00000586856 DDX10Q13206 875 aaKnown RBP32.4■■■□□ 2.78
ERCC2-209ENST00000586856 CASZ1Q86V15 1759 aa32.38■■■□□ 2.77
ERCC2-209ENST00000586856 SLC27A3Q5K4L6 730 aa32.38■■■□□ 2.77
ERCC2-209ENST00000586856 LRRC4BQ9NT99 713 aa32.38■■■□□ 2.77
ERCC2-209ENST00000586856 STK32BQ9NY57 414 aa32.38■■■□□ 2.77
ERCC2-209ENST00000586856 KDM6AO15550 1401 aaPredicted RBP32.37■■■□□ 2.77
ERCC2-209ENST00000586856 U2SURPO15042 1029 aaKnown RBP32.37■■■□□ 2.77
ERCC2-209ENST00000586856 PALLDQ8WX93 1383 aa32.35■■■□□ 2.77
ERCC2-209ENST00000586856 HSP90AB1P08238 724 aaKnown RBP32.35■■■□□ 2.77
ERCC2-209ENST00000586856 PIGBQ92521 554 aa32.35■■■□□ 2.77
ERCC2-209ENST00000586856 C1orf141Q5JVX7 400 aa32.34■■■□□ 2.77
ERCC2-209ENST00000586856 TMOD3Q9NYL9 352 aa32.34■■■□□ 2.77
ERCC2-209ENST00000586856 SLC15A2Q16348 729 aa32.33■■■□□ 2.77
ERCC2-209ENST00000586856 DCAF5Q96JK2 942 aa32.33■■■□□ 2.77
ERCC2-209ENST00000586856 SCN11AQ9UI33 1791 aa32.32■■■□□ 2.77
ERCC2-209ENST00000586856 C5P01031 1676 aa32.32■■■□□ 2.76
ERCC2-209ENST00000586856 KCNQ4P56696 695 aa32.32■■■□□ 2.76
ERCC2-209ENST00000586856 CCNL1Q9UK58 526 aaPredicted RBP32.32■■■□□ 2.76
ERCC2-209ENST00000586856 ZNF827Q17R98 1081 aa32.3■■■□□ 2.76
ERCC2-209ENST00000586856 VIRMAQ69YN4 1812 aaKnown RBP32.3■■■□□ 2.76
ERCC2-209ENST00000586856 TUBGCP6Q96RT7 1819 aa32.3■■■□□ 2.76
ERCC2-209ENST00000586856 QSER1Q2KHR3 1735 aa32.29■■■□□ 2.76
ERCC2-209ENST00000586856 TAF1LQ8IZX4 1826 aa32.29■■■□□ 2.76
ERCC2-209ENST00000586856 SMARCC1Q92922 1105 aaPredicted RBP32.29■■■□□ 2.76
ERCC2-209ENST00000586856 ERVV-2B6SEH9 535 aa32.27■■■□□ 2.76
ERCC2-209ENST00000586856 NUDCQ9Y266 331 aa32.27■■■□□ 2.76
ERCC2-209ENST00000586856 AKAP4Q5JQC9 854 aa32.26■■■□□ 2.75
ERCC2-209ENST00000586856 MTHFSDQ2M296 383 aaKnown RBP32.25■■■□□ 2.75
ERCC2-209ENST00000586856 AKT1S1Q96B36 256 aa32.25■■■□□ 2.75
ERCC2-209ENST00000586856 PDGFDQ9GZP0 370 aaPredicted RBP32.25■■■□□ 2.75
ERCC2-209ENST00000586856 ADAMTS7Q9UKP4 1686 aa32.24■■■□□ 2.75
ERCC2-209ENST00000586856 RALBP1Q15311 655 aa32.24■■■□□ 2.75
ERCC2-209ENST00000586856 ASAP1Q9ULH1 1129 aa32.23■■■□□ 2.75
ERCC2-209ENST00000586856 MRC1P22897 1456 aa32.22■■■□□ 2.75
ERCC2-209ENST00000586856 U2AF1L5P0DN76 240 aaPredicted RBP32.21■■■□□ 2.75
ERCC2-209ENST00000586856 CABP4P57796 275 aa32.21■■■□□ 2.75
ERCC2-209ENST00000586856 U2AF1Q01081 240 aaKnown RBP eCLIP32.21■■■□□ 2.75
ERCC2-209ENST00000586856 RSPH6AQ9H0K4 717 aa32.21■■■□□ 2.75
ERCC2-209ENST00000586856 PRKAR2BP31323 418 aa32.2■■■□□ 2.75
ERCC2-209ENST00000586856 ATG3Q9NT62 314 aa32.2■■■□□ 2.75
ERCC2-209ENST00000586856 C4BP0C0L5 1744 aa32.2■■■□□ 2.74
ERCC2-209ENST00000586856 LOC102724428A0A0B4J2F2 783 aa32.17■■■□□ 2.74
ERCC2-209ENST00000586856 SIK1P57059 783 aa32.17■■■□□ 2.74
ERCC2-209ENST00000586856 ZNF831Q5JPB2 1677 aa32.16■■■□□ 2.74
ERCC2-209ENST00000586856 GAS2L2Q8NHY3 880 aa32.16■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms