RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 PHACTR3Q96KR7 559 aa16.78■□□□□ 0.28
DNMT1-208ENST00000586667 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.28
DNMT1-208ENST00000586667 TOGARAM1Q9Y4F4 1720 aa16.77■□□□□ 0.28
DNMT1-208ENST00000586667 ONECUT3O60422 494 aaPredicted RBP16.77■□□□□ 0.28
DNMT1-208ENST00000586667 IL2RBP14784 551 aa16.77■□□□□ 0.28
DNMT1-208ENST00000586667 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.28
DNMT1-208ENST00000586667 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
DNMT1-208ENST00000586667 DLG5Q8TDM6 1919 aa16.76■□□□□ 0.27
DNMT1-208ENST00000586667 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
DNMT1-208ENST00000586667 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
DNMT1-208ENST00000586667 RAPGEF4Q8WZA2 1011 aa16.75■□□□□ 0.27
DNMT1-208ENST00000586667 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
DNMT1-208ENST00000586667 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
DNMT1-208ENST00000586667 TATP17735 454 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-208ENST00000586667 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
DNMT1-208ENST00000586667 CDCA7Q9BWT1 371 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-208ENST00000586667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.276e-7■■□□□ 12.6
DNMT1-208ENST00000586667 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-208ENST00000586667 EP400Q96L91 3159 aa16.72■□□□□ 0.27
DNMT1-208ENST00000586667 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
DNMT1-208ENST00000586667 VIRMAQ69YN4 1812 aaKnown RBP16.72■□□□□ 0.27
DNMT1-208ENST00000586667 DOT1LQ8TEK3 1739 aa16.71■□□□□ 0.27
DNMT1-208ENST00000586667 CYP27B1O15528 508 aa16.71■□□□□ 0.27
DNMT1-208ENST00000586667 MRC1P22897 1456 aa16.71■□□□□ 0.27
DNMT1-208ENST00000586667 SCN11AQ9UI33 1791 aa16.7■□□□□ 0.26
DNMT1-208ENST00000586667 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
DNMT1-208ENST00000586667 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
DNMT1-208ENST00000586667 MAPK8IP3Q9UPT6 1336 aa16.7■□□□□ 0.26
DNMT1-208ENST00000586667 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
DNMT1-208ENST00000586667 MAP3K5Q99683 1374 aa16.69■□□□□ 0.26
DNMT1-208ENST00000586667 RXRBP28702 533 aa16.69■□□□□ 0.26
DNMT1-208ENST00000586667 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
DNMT1-208ENST00000586667 AMOTQ4VCS5 1084 aa16.69■□□□□ 0.26
DNMT1-208ENST00000586667 SEPT12Q8IYM1 358 aa16.69■□□□□ 0.26
DNMT1-208ENST00000586667 ZCRB1Q8TBF4 217 aaKnown RBP16.69■□□□□ 0.26
DNMT1-208ENST00000586667 APAF1O14727 1248 aa16.68■□□□□ 0.26
DNMT1-208ENST00000586667 PHKG2P15735 406 aa16.68■□□□□ 0.26
DNMT1-208ENST00000586667 TMPOP42166 694 aaKnown RBP16.68■□□□□ 0.26
DNMT1-208ENST00000586667 PLEKHO1Q53GL0 409 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-208ENST00000586667 ZNF530Q6P9A1 599 aaPredicted RBP16.68■□□□□ 0.26
DNMT1-208ENST00000586667 SENP3-EIF4A1A0A087X0R7 540 aa16.67■□□□□ 0.26
DNMT1-208ENST00000586667 DDB1Q16531 1140 aa16.67■□□□□ 0.26
DNMT1-208ENST00000586667 MARCH10Q8NA82 808 aaPredicted RBP16.67■□□□□ 0.26
DNMT1-208ENST00000586667 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
DNMT1-208ENST00000586667 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
DNMT1-208ENST00000586667 SPG7Q9UQ90 795 aa16.67■□□□□ 0.26
DNMT1-208ENST00000586667 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
DNMT1-208ENST00000586667 BCL9O00512 1426 aa16.67■□□□□ 0.26
DNMT1-208ENST00000586667 CEMIPQ8WUJ3 1361 aa16.66■□□□□ 0.26
DNMT1-208ENST00000586667 NHSQ6T4R5 1651 aa16.66■□□□□ 0.26
DNMT1-208ENST00000586667 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
DNMT1-208ENST00000586667 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
DNMT1-208ENST00000586667 PAPPAQ13219 1627 aa16.65■□□□□ 0.26
DNMT1-208ENST00000586667 SBF2Q86WG5 1849 aa16.65■□□□□ 0.26
DNMT1-208ENST00000586667 AKAP4Q5JQC9 854 aa16.64■□□□□ 0.25
DNMT1-208ENST00000586667 ZNF521Q96K83 1311 aa16.64■□□□□ 0.25
DNMT1-208ENST00000586667 ITGB4P16144 1822 aa16.63■□□□□ 0.25
DNMT1-208ENST00000586667 A0A0G2JS52 829 aa16.63■□□□□ 0.25
DNMT1-208ENST00000586667 EXOC5O00471 708 aa16.63■□□□□ 0.25
DNMT1-208ENST00000586667 MYT1Q01538 1121 aa16.63■□□□□ 0.25
DNMT1-208ENST00000586667 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
DNMT1-208ENST00000586667 IFNL2Q8IZJ0 200 aa16.62■□□□□ 0.25
DNMT1-208ENST00000586667 DDX54Q8TDD1 881 aaKnown RBP16.62■□□□□ 0.25
DNMT1-208ENST00000586667 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
DNMT1-208ENST00000586667 RIPK4P57078 832 aa16.61■□□□□ 0.25
DNMT1-208ENST00000586667 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
DNMT1-208ENST00000586667 IL17REQ8NFR9 667 aa16.61■□□□□ 0.25
DNMT1-208ENST00000586667 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
DNMT1-208ENST00000586667 TNS1Q9HBL0 1735 aaKnown RBP16.6■□□□□ 0.25
DNMT1-208ENST00000586667 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 NEFMP07197 916 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 DCTN1Q14203 1278 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 MCM10Q7L590 875 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 KRT27Q7Z3Y8 459 aa16.6■□□□□ 0.25
DNMT1-208ENST00000586667 HTATSF1O43719 755 aaKnown RBP16.59■□□□□ 0.25
DNMT1-208ENST00000586667 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
DNMT1-208ENST00000586667 DCAF5Q96JK2 942 aa16.59■□□□□ 0.25
DNMT1-208ENST00000586667 LGR6Q9HBX8 967 aa16.59■□□□□ 0.25
DNMT1-208ENST00000586667 RNMTO43148 476 aaKnown RBP16.58■□□□□ 0.24
DNMT1-208ENST00000586667 PDE3BQ13370 1112 aa16.58■□□□□ 0.24
DNMT1-208ENST00000586667 WWC1Q8IX03 1113 aa16.58■□□□□ 0.24
DNMT1-208ENST00000586667 UBR2Q8IWV8 1755 aa16.58■□□□□ 0.24
DNMT1-208ENST00000586667 BTAF1O14981 1849 aa16.58■□□□□ 0.24
DNMT1-208ENST00000586667 HSP90AB1P08238 724 aaKnown RBP16.57■□□□□ 0.24
DNMT1-208ENST00000586667 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.24
DNMT1-208ENST00000586667 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
DNMT1-208ENST00000586667 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
DNMT1-208ENST00000586667 NGEFQ8N5V2 710 aa16.56■□□□□ 0.24
DNMT1-208ENST00000586667 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
DNMT1-208ENST00000586667 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
DNMT1-208ENST00000586667 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
DNMT1-208ENST00000586667 SALL2Q9Y467 1007 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-208ENST00000586667 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
DNMT1-208ENST00000586667 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
DNMT1-208ENST00000586667 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
DNMT1-208ENST00000586667 SPINK5Q9NQ38 1064 aaPredicted RBP16.53■□□□□ 0.24
DNMT1-208ENST00000586667 KCNQ2O43526 872 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms