RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 PPM1GO15355 546 aaPredicted RBP28.22■■■□□ 2.11
CIRBP-209ENST00000586555 STK32BQ9NY57 414 aa28.22■■■□□ 2.11
CIRBP-209ENST00000586555 HSP90AB2PQ58FF8 381 aa28.21■■■□□ 2.11
CIRBP-209ENST00000586555 ANKRD26Q9UPS8 1709 aa28.21■■■□□ 2.11
CIRBP-209ENST00000586555 EMILIN1Q9Y6C2 1016 aa28.2■■■□□ 2.1
CIRBP-209ENST00000586555 DDX54Q8TDD1 881 aaKnown RBP28.19■■■□□ 2.1
CIRBP-209ENST00000586555 TNNT2P45379 298 aaPredicted RBP28.18■■■□□ 2.1
CIRBP-209ENST00000586555 MORC1Q86VD1 984 aa28.18■■■□□ 2.1
CIRBP-209ENST00000586555 NBPF6Q5VWK0 638 aa28.17■■■□□ 2.1
CIRBP-209ENST00000586555 NBPF4Q96M43 638 aa28.17■■■□□ 2.1
CIRBP-209ENST00000586555 PPP1R1BQ9UD71 204 aaPredicted RBP28.17■■■□□ 2.1
CIRBP-209ENST00000586555 MAP2P11137 1827 aaKnown RBP28.16■■■□□ 2.1
CIRBP-209ENST00000586555 POLKQ9UBT6 870 aa28.16■■■□□ 2.1
CIRBP-209ENST00000586555 PAPPAQ13219 1627 aa28.16■■■□□ 2.1
CIRBP-209ENST00000586555 WASHC2AQ641Q2 1341 aa28.16■■■□□ 2.1
CIRBP-209ENST00000586555 SHANK3Q9BYB0 1731 aa28.15■■■□□ 2.1
CIRBP-209ENST00000586555 ZCRB1Q8TBF4 217 aaKnown RBP28.15■■■□□ 2.1
CIRBP-209ENST00000586555 MEGF6O75095 1541 aa28.14■■■□□ 2.1
CIRBP-209ENST00000586555 ZBTB7AO95365 584 aa28.14■■■□□ 2.1
CIRBP-209ENST00000586555 PTGER2P43116 358 aa28.14■■■□□ 2.1
CIRBP-209ENST00000586555 RAPGEF4Q8WZA2 1011 aa28.13■■■□□ 2.09
CIRBP-209ENST00000586555 LRRC4BQ9NT99 713 aa28.13■■■□□ 2.09
CIRBP-209ENST00000586555 TATP17735 454 aaPredicted RBP28.09■■■□□ 2.09
CIRBP-209ENST00000586555 PRIM1P49642 420 aaKnown RBP28.09■■■□□ 2.09
CIRBP-209ENST00000586555 SLC27A3Q5K4L6 730 aa28.09■■■□□ 2.09
CIRBP-209ENST00000586555 USHBP1Q8N6Y0 703 aa28.09■■■□□ 2.09
CIRBP-209ENST00000586555 ATF5Q9Y2D1 282 aaPredicted RBP28.09■■■□□ 2.09
CIRBP-209ENST00000586555 MTFR1LQ9H019 292 aa28.08■■■□□ 2.09
CIRBP-209ENST00000586555 DOT1LQ8TEK3 1739 aa28.07■■■□□ 2.08
CIRBP-209ENST00000586555 ZNF827Q17R98 1081 aa28.07■■■□□ 2.08
CIRBP-209ENST00000586555 AMER1Q5JTC6 1135 aaPredicted RBP28.07■■■□□ 2.08
CIRBP-209ENST00000586555 SGIP1Q9BQI5 828 aa28.07■■■□□ 2.08
CIRBP-209ENST00000586555 PER1O15534 1290 aaPredicted RBP28.06■■■□□ 2.08
CIRBP-209ENST00000586555 AKT1S1Q96B36 256 aa28.06■■■□□ 2.08
CIRBP-209ENST00000586555 LY75O60449 1722 aa28.04■■■□□ 2.08
CIRBP-209ENST00000586555 SYTL4Q96C24 671 aaPredicted RBP28.03■■■□□ 2.08
CIRBP-209ENST00000586555 QSER1Q2KHR3 1735 aa28.02■■■□□ 2.08
CIRBP-209ENST00000586555 EYA1Q99502 592 aa28.01■■■□□ 2.07
CIRBP-209ENST00000586555 EIF4A2Q14240 407 aaKnown RBP28■■■□□ 2.07
CIRBP-209ENST00000586555 CC2D1BQ5T0F9 858 aaKnown RBP27.99■■■□□ 2.07
CIRBP-209ENST00000586555 NCAPD2Q15021 1401 aa27.99■■■□□ 2.07
CIRBP-209ENST00000586555 NPC1L1Q9UHC9 1359 aa27.98■■■□□ 2.07
CIRBP-209ENST00000586555 PCDH11XQ9BZA7 1347 aa27.97■■■□□ 2.07
CIRBP-209ENST00000586555 PCDH11YQ9BZA8 1340 aa27.97■■■□□ 2.07
CIRBP-209ENST00000586555 KCNQ4P56696 695 aa27.97■■■□□ 2.07
CIRBP-209ENST00000586555 DCAF8L1A6NGE4 600 aa27.96■■■□□ 2.07
CIRBP-209ENST00000586555 SLC16A10Q8TF71 515 aa27.96■■■□□ 2.07
CIRBP-209ENST00000586555 SYT17Q9BSW7 474 aa27.96■■■□□ 2.07
CIRBP-209ENST00000586555 SPG7Q9UQ90 795 aa27.96■■■□□ 2.07
CIRBP-209ENST00000586555 PNPLA7Q6ZV29 1317 aa27.95■■■□□ 2.07
CIRBP-209ENST00000586555 TUBGCP6Q96RT7 1819 aa27.95■■■□□ 2.07
CIRBP-209ENST00000586555 CYP27B1O15528 508 aa27.95■■■□□ 2.06
CIRBP-209ENST00000586555 FHDC1Q9C0D6 1143 aaPredicted RBP27.95■■■□□ 2.06
CIRBP-209ENST00000586555 COL24A1Q17RW2 1714 aa27.94■■■□□ 2.06
CIRBP-209ENST00000586555 ARXQ96QS3 562 aa27.93■■■□□ 2.06
CIRBP-209ENST00000586555 CCNL1Q9UK58 526 aaPredicted RBP27.93■■■□□ 2.06
CIRBP-209ENST00000586555 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
CIRBP-209ENST00000586555 YY1P25490 414 aa27.92■■■□□ 2.06
CIRBP-209ENST00000586555 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.92■■■□□ 2.06
CIRBP-209ENST00000586555 MTHFSP49914 203 aa27.91■■■□□ 2.06
CIRBP-209ENST00000586555 TFCP2L1Q9NZI6 479 aa27.91■■■□□ 2.06
CIRBP-209ENST00000586555 IGSF1Q8N6C5 1336 aa27.91■■■□□ 2.06
CIRBP-209ENST00000586555 CNGB1Q14028 1251 aaPredicted RBP27.9■■■□□ 2.06
CIRBP-209ENST00000586555 UTRNP46939 3433 aa27.9■■■□□ 2.06
CIRBP-209ENST00000586555 MAP3K5Q99683 1374 aa27.89■■■□□ 2.06
CIRBP-209ENST00000586555 PLEKHG2Q9H7P9 1386 aa27.89■■■□□ 2.06
CIRBP-209ENST00000586555 ITGB4P16144 1822 aa27.89■■■□□ 2.06
CIRBP-209ENST00000586555 NKX1-1Q15270 411 aaPredicted RBP27.88■■■□□ 2.05
CIRBP-209ENST00000586555 TOGARAM1Q9Y4F4 1720 aa27.87■■■□□ 2.05
CIRBP-209ENST00000586555 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
CIRBP-209ENST00000586555 IL13P35225 146 aa27.84■■■□□ 2.05
CIRBP-209ENST00000586555 ZEB1P37275 1124 aaPredicted RBP27.84■■■□□ 2.05
CIRBP-209ENST00000586555 TAF1LQ8IZX4 1826 aa27.83■■■□□ 2.05
CIRBP-209ENST00000586555 PLEKHO1Q53GL0 409 aaPredicted RBP27.83■■■□□ 2.05
CIRBP-209ENST00000586555 IFNL2Q8IZJ0 200 aa27.83■■■□□ 2.05
CIRBP-209ENST00000586555 PALLDQ8WX93 1383 aa27.83■■■□□ 2.05
CIRBP-209ENST00000586555 AMOTQ4VCS5 1084 aa27.82■■■□□ 2.04
CIRBP-209ENST00000586555 C5P01031 1676 aa27.81■■■□□ 2.04
CIRBP-209ENST00000586555 DIAPH1O60610 1272 aaKnown RBP27.81■■■□□ 2.04
CIRBP-209ENST00000586555 HMGB2P26583 209 aaKnown RBP27.81■■■□□ 2.04
CIRBP-209ENST00000586555 SULT6B1Q6IMI4 303 aa27.81■■■□□ 2.04
CIRBP-209ENST00000586555 COL23A1Q86Y22 540 aaPredicted RBP27.81■■■□□ 2.04
CIRBP-209ENST00000586555 PIGBQ92521 554 aa27.81■■■□□ 2.04
CIRBP-209ENST00000586555 POLD1P28340 1107 aa27.8■■■□□ 2.04
CIRBP-209ENST00000586555 SMARCC1Q92922 1105 aaPredicted RBP27.8■■■□□ 2.04
CIRBP-209ENST00000586555 PHKG2P15735 406 aa27.78■■■□□ 2.04
CIRBP-209ENST00000586555 HSP90AB1P08238 724 aaKnown RBP27.77■■■□□ 2.04
CIRBP-209ENST00000586555 CFAP53Q96M91 514 aa27.77■■■□□ 2.04
CIRBP-209ENST00000586555 CHD4Q14839 1912 aa27.77■■■□□ 2.04
CIRBP-209ENST00000586555 KDRP35968 1356 aa27.75■■■□□ 2.03
CIRBP-209ENST00000586555 AEBP1Q8IUX7 1158 aa27.75■■■□□ 2.03
CIRBP-209ENST00000586555 C1orf141Q5JVX7 400 aa27.73■■■□□ 2.03
CIRBP-209ENST00000586555 ZNF530Q6P9A1 599 aaPredicted RBP27.73■■■□□ 2.03
CIRBP-209ENST00000586555 FLAD1Q8NFF5 587 aa27.73■■■□□ 2.03
CIRBP-209ENST00000586555 TMOD3Q9NYL9 352 aa27.72■■■□□ 2.03
CIRBP-209ENST00000586555 C4BP0C0L5 1744 aa27.72■■■□□ 2.03
CIRBP-209ENST00000586555 MSH5O43196 834 aa27.71■■■□□ 2.03
CIRBP-209ENST00000586555 DCAF5Q96JK2 942 aa27.71■■■□□ 2.03
CIRBP-209ENST00000586555 LOC102724428A0A0B4J2F2 783 aa27.69■■■□□ 2.02
CIRBP-209ENST00000586555 U2SURPO15042 1029 aaKnown RBP27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms