RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-209	ENST00000586555	PPM1G	O15355	546 aa	Predicted RBP	28.22	■■■□□ 2.11
CIRBP-209	ENST00000586555	STK32B	Q9NY57	414 aa		28.22	■■■□□ 2.11
CIRBP-209	ENST00000586555	HSP90AB2P	Q58FF8	381 aa		28.21	■■■□□ 2.11
CIRBP-209	ENST00000586555	ANKRD26	Q9UPS8	1709 aa		28.21	■■■□□ 2.11
CIRBP-209	ENST00000586555	EMILIN1	Q9Y6C2	1016 aa		28.2	■■■□□ 2.1
CIRBP-209	ENST00000586555	DDX54	Q8TDD1	881 aa	Known RBP	28.19	■■■□□ 2.1
CIRBP-209	ENST00000586555	TNNT2	P45379	298 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-209	ENST00000586555	MORC1	Q86VD1	984 aa		28.18	■■■□□ 2.1
CIRBP-209	ENST00000586555	NBPF6	Q5VWK0	638 aa		28.17	■■■□□ 2.1
CIRBP-209	ENST00000586555	NBPF4	Q96M43	638 aa		28.17	■■■□□ 2.1
CIRBP-209	ENST00000586555	PPP1R1B	Q9UD71	204 aa	Predicted RBP	28.17	■■■□□ 2.1
CIRBP-209	ENST00000586555	MAP2	P11137	1827 aa	Known RBP	28.16	■■■□□ 2.1
CIRBP-209	ENST00000586555	POLK	Q9UBT6	870 aa		28.16	■■■□□ 2.1
CIRBP-209	ENST00000586555	PAPPA	Q13219	1627 aa		28.16	■■■□□ 2.1
CIRBP-209	ENST00000586555	WASHC2A	Q641Q2	1341 aa		28.16	■■■□□ 2.1
CIRBP-209	ENST00000586555	SHANK3	Q9BYB0	1731 aa		28.15	■■■□□ 2.1
CIRBP-209	ENST00000586555	ZCRB1	Q8TBF4	217 aa	Known RBP	28.15	■■■□□ 2.1
CIRBP-209	ENST00000586555	MEGF6	O75095	1541 aa		28.14	■■■□□ 2.1
CIRBP-209	ENST00000586555	ZBTB7A	O95365	584 aa		28.14	■■■□□ 2.1
CIRBP-209	ENST00000586555	PTGER2	P43116	358 aa		28.14	■■■□□ 2.1
CIRBP-209	ENST00000586555	RAPGEF4	Q8WZA2	1011 aa		28.13	■■■□□ 2.09
CIRBP-209	ENST00000586555	LRRC4B	Q9NT99	713 aa		28.13	■■■□□ 2.09
CIRBP-209	ENST00000586555	TAT	P17735	454 aa	Predicted RBP	28.09	■■■□□ 2.09
CIRBP-209	ENST00000586555	PRIM1	P49642	420 aa	Known RBP	28.09	■■■□□ 2.09
CIRBP-209	ENST00000586555	SLC27A3	Q5K4L6	730 aa		28.09	■■■□□ 2.09
CIRBP-209	ENST00000586555	USHBP1	Q8N6Y0	703 aa		28.09	■■■□□ 2.09
CIRBP-209	ENST00000586555	ATF5	Q9Y2D1	282 aa	Predicted RBP	28.09	■■■□□ 2.09
CIRBP-209	ENST00000586555	MTFR1L	Q9H019	292 aa		28.08	■■■□□ 2.09
CIRBP-209	ENST00000586555	DOT1L	Q8TEK3	1739 aa		28.07	■■■□□ 2.08
CIRBP-209	ENST00000586555	ZNF827	Q17R98	1081 aa		28.07	■■■□□ 2.08
CIRBP-209	ENST00000586555	AMER1	Q5JTC6	1135 aa	Predicted RBP	28.07	■■■□□ 2.08
CIRBP-209	ENST00000586555	SGIP1	Q9BQI5	828 aa		28.07	■■■□□ 2.08
CIRBP-209	ENST00000586555	PER1	O15534	1290 aa	Predicted RBP	28.06	■■■□□ 2.08
CIRBP-209	ENST00000586555	AKT1S1	Q96B36	256 aa		28.06	■■■□□ 2.08
CIRBP-209	ENST00000586555	LY75	O60449	1722 aa		28.04	■■■□□ 2.08
CIRBP-209	ENST00000586555	SYTL4	Q96C24	671 aa	Predicted RBP	28.03	■■■□□ 2.08
CIRBP-209	ENST00000586555	QSER1	Q2KHR3	1735 aa		28.02	■■■□□ 2.08
CIRBP-209	ENST00000586555	EYA1	Q99502	592 aa		28.01	■■■□□ 2.07
CIRBP-209	ENST00000586555	EIF4A2	Q14240	407 aa	Known RBP	28	■■■□□ 2.07
CIRBP-209	ENST00000586555	CC2D1B	Q5T0F9	858 aa	Known RBP	27.99	■■■□□ 2.07
CIRBP-209	ENST00000586555	NCAPD2	Q15021	1401 aa		27.99	■■■□□ 2.07
CIRBP-209	ENST00000586555	NPC1L1	Q9UHC9	1359 aa		27.98	■■■□□ 2.07
CIRBP-209	ENST00000586555	PCDH11X	Q9BZA7	1347 aa		27.97	■■■□□ 2.07
CIRBP-209	ENST00000586555	PCDH11Y	Q9BZA8	1340 aa		27.97	■■■□□ 2.07
CIRBP-209	ENST00000586555	KCNQ4	P56696	695 aa		27.97	■■■□□ 2.07
CIRBP-209	ENST00000586555	DCAF8L1	A6NGE4	600 aa		27.96	■■■□□ 2.07
CIRBP-209	ENST00000586555	SLC16A10	Q8TF71	515 aa		27.96	■■■□□ 2.07
CIRBP-209	ENST00000586555	SYT17	Q9BSW7	474 aa		27.96	■■■□□ 2.07
CIRBP-209	ENST00000586555	SPG7	Q9UQ90	795 aa		27.96	■■■□□ 2.07
CIRBP-209	ENST00000586555	PNPLA7	Q6ZV29	1317 aa		27.95	■■■□□ 2.07
CIRBP-209	ENST00000586555	TUBGCP6	Q96RT7	1819 aa		27.95	■■■□□ 2.07
CIRBP-209	ENST00000586555	CYP27B1	O15528	508 aa		27.95	■■■□□ 2.06
CIRBP-209	ENST00000586555	FHDC1	Q9C0D6	1143 aa	Predicted RBP	27.95	■■■□□ 2.06
CIRBP-209	ENST00000586555	COL24A1	Q17RW2	1714 aa		27.94	■■■□□ 2.06
CIRBP-209	ENST00000586555	ARX	Q96QS3	562 aa		27.93	■■■□□ 2.06
CIRBP-209	ENST00000586555	CCNL1	Q9UK58	526 aa	Predicted RBP	27.93	■■■□□ 2.06
CIRBP-209	ENST00000586555	PKD1L3	Q7Z443	1732 aa		27.92	■■■□□ 2.06
CIRBP-209	ENST00000586555	YY1	P25490	414 aa		27.92	■■■□□ 2.06
CIRBP-209	ENST00000586555	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	27.92	■■■□□ 2.06
CIRBP-209	ENST00000586555	MTHFS	P49914	203 aa		27.91	■■■□□ 2.06
CIRBP-209	ENST00000586555	TFCP2L1	Q9NZI6	479 aa		27.91	■■■□□ 2.06
CIRBP-209	ENST00000586555	IGSF1	Q8N6C5	1336 aa		27.91	■■■□□ 2.06
CIRBP-209	ENST00000586555	CNGB1	Q14028	1251 aa	Predicted RBP	27.9	■■■□□ 2.06
CIRBP-209	ENST00000586555	UTRN	P46939	3433 aa		27.9	■■■□□ 2.06
CIRBP-209	ENST00000586555	MAP3K5	Q99683	1374 aa		27.89	■■■□□ 2.06
CIRBP-209	ENST00000586555	PLEKHG2	Q9H7P9	1386 aa		27.89	■■■□□ 2.06
CIRBP-209	ENST00000586555	ITGB4	P16144	1822 aa		27.89	■■■□□ 2.06
CIRBP-209	ENST00000586555	NKX1-1	Q15270	411 aa	Predicted RBP	27.88	■■■□□ 2.05
CIRBP-209	ENST00000586555	TOGARAM1	Q9Y4F4	1720 aa		27.87	■■■□□ 2.05
CIRBP-209	ENST00000586555	MPRIP	Q6WCQ1	1025 aa		27.85	■■■□□ 2.05
CIRBP-209	ENST00000586555	IL13	P35225	146 aa		27.84	■■■□□ 2.05
CIRBP-209	ENST00000586555	ZEB1	P37275	1124 aa	Predicted RBP	27.84	■■■□□ 2.05
CIRBP-209	ENST00000586555	TAF1L	Q8IZX4	1826 aa		27.83	■■■□□ 2.05
CIRBP-209	ENST00000586555	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.83	■■■□□ 2.05
CIRBP-209	ENST00000586555	IFNL2	Q8IZJ0	200 aa		27.83	■■■□□ 2.05
CIRBP-209	ENST00000586555	PALLD	Q8WX93	1383 aa		27.83	■■■□□ 2.05
CIRBP-209	ENST00000586555	AMOT	Q4VCS5	1084 aa		27.82	■■■□□ 2.04
CIRBP-209	ENST00000586555	C5	P01031	1676 aa		27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	DIAPH1	O60610	1272 aa	Known RBP	27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	HMGB2	P26583	209 aa	Known RBP	27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	SULT6B1	Q6IMI4	303 aa		27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	COL23A1	Q86Y22	540 aa	Predicted RBP	27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	PIGB	Q92521	554 aa		27.81	■■■□□ 2.04
CIRBP-209	ENST00000586555	POLD1	P28340	1107 aa		27.8	■■■□□ 2.04
CIRBP-209	ENST00000586555	SMARCC1	Q92922	1105 aa	Predicted RBP	27.8	■■■□□ 2.04
CIRBP-209	ENST00000586555	PHKG2	P15735	406 aa		27.78	■■■□□ 2.04
CIRBP-209	ENST00000586555	HSP90AB1	P08238	724 aa	Known RBP	27.77	■■■□□ 2.04
CIRBP-209	ENST00000586555	CFAP53	Q96M91	514 aa		27.77	■■■□□ 2.04
CIRBP-209	ENST00000586555	CHD4	Q14839	1912 aa		27.77	■■■□□ 2.04
CIRBP-209	ENST00000586555	KDR	P35968	1356 aa		27.75	■■■□□ 2.03
CIRBP-209	ENST00000586555	AEBP1	Q8IUX7	1158 aa		27.75	■■■□□ 2.03
CIRBP-209	ENST00000586555	C1orf141	Q5JVX7	400 aa		27.73	■■■□□ 2.03
CIRBP-209	ENST00000586555	ZNF530	Q6P9A1	599 aa	Predicted RBP	27.73	■■■□□ 2.03
CIRBP-209	ENST00000586555	FLAD1	Q8NFF5	587 aa		27.73	■■■□□ 2.03
CIRBP-209	ENST00000586555	TMOD3	Q9NYL9	352 aa		27.72	■■■□□ 2.03
CIRBP-209	ENST00000586555	C4B	P0C0L5	1744 aa		27.72	■■■□□ 2.03
CIRBP-209	ENST00000586555	MSH5	O43196	834 aa		27.71	■■■□□ 2.03
CIRBP-209	ENST00000586555	DCAF5	Q96JK2	942 aa		27.71	■■■□□ 2.03
CIRBP-209	ENST00000586555	LOC102724428	A0A0B4J2F2	783 aa		27.69	■■■□□ 2.02
CIRBP-209	ENST00000586555	U2SURP	O15042	1029 aa	Known RBP	27.69	■■■□□ 2.02

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