RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 RRS1Q15050 365 aaKnown RBP16.8■□□□□ 0.28
BRCA1-225ENST00000586385 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
BRCA1-225ENST00000586385 NLGN2Q8NFZ4 835 aa16.8■□□□□ 0.28
BRCA1-225ENST00000586385 ZCRB1Q8TBF4 217 aaKnown RBP16.8■□□□□ 0.28
BRCA1-225ENST00000586385 SYTL4Q96C24 671 aaPredicted RBP16.8■□□□□ 0.28
BRCA1-225ENST00000586385 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
BRCA1-225ENST00000586385 TUBGCP6Q96RT7 1819 aa16.8■□□□□ 0.28
BRCA1-225ENST00000586385 DOT1LQ8TEK3 1739 aa16.79■□□□□ 0.28
BRCA1-225ENST00000586385 TFCP2L1Q9NZI6 479 aa16.79■□□□□ 0.28
BRCA1-225ENST00000586385 FYB1O15117 783 aa16.78■□□□□ 0.28
BRCA1-225ENST00000586385 USHBP1Q8N6Y0 703 aa16.78■□□□□ 0.28
BRCA1-225ENST00000586385 RGPD2P0DJD1 1756 aa16.78■□□□□ 0.28
BRCA1-225ENST00000586385 LY75O60449 1722 aa16.78■□□□□ 0.28
BRCA1-225ENST00000586385 RTL1A6NKG5 1358 aa16.77■□□□□ 0.28
BRCA1-225ENST00000586385 GPR162Q16538 588 aa16.77■□□□□ 0.28
BRCA1-225ENST00000586385 KAT6BQ8WYB5 2073 aa16.77■□□□□ 0.27
BRCA1-225ENST00000586385 COL23A1Q86Y22 540 aaPredicted RBP16.76■□□□□ 0.27
BRCA1-225ENST00000586385 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
BRCA1-225ENST00000586385 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
BRCA1-225ENST00000586385 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
BRCA1-225ENST00000586385 POLD1P28340 1107 aa16.75■□□□□ 0.27
BRCA1-225ENST00000586385 C1QTNF8P60827 252 aa16.75■□□□□ 0.27
BRCA1-225ENST00000586385 CHD4Q14839 1912 aa16.74■□□□□ 0.27
BRCA1-225ENST00000586385 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.277e-6■■■□□ 18.9
BRCA1-225ENST00000586385 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
BRCA1-225ENST00000586385 USP47Q96K76 1375 aa16.72■□□□□ 0.27
BRCA1-225ENST00000586385 CGNL1Q0VF96 1302 aa16.71■□□□□ 0.27
BRCA1-225ENST00000586385 CYP27B1O15528 508 aa16.71■□□□□ 0.27
BRCA1-225ENST00000586385 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
BRCA1-225ENST00000586385 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
BRCA1-225ENST00000586385 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.27
BRCA1-225ENST00000586385 INSRP06213 1382 aa16.71■□□□□ 0.27
BRCA1-225ENST00000586385 SENP3-EIF4A1A0A087X0R7 540 aa16.7■□□□□ 0.26
BRCA1-225ENST00000586385 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
BRCA1-225ENST00000586385 CARD14Q9BXL6 1004 aa16.7■□□□□ 0.26
BRCA1-225ENST00000586385 GOLGB1Q14789 3259 aaKnown RBP16.69■□□□□ 0.26
BRCA1-225ENST00000586385 FLT4P35916 1363 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 PALLDQ8WX93 1383 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 SLC24A1O60721 1099 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
BRCA1-225ENST00000586385 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 PCDH11XQ9BZA7 1347 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 PCDH11YQ9BZA8 1340 aa16.68■□□□□ 0.26
BRCA1-225ENST00000586385 MSH5O43196 834 aa16.67■□□□□ 0.26
BRCA1-225ENST00000586385 TMF1P82094 1093 aa16.67■□□□□ 0.26
BRCA1-225ENST00000586385 SMIM5Q71RC9 77 aa16.67■□□□□ 0.26
BRCA1-225ENST00000586385 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
BRCA1-225ENST00000586385 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
BRCA1-225ENST00000586385 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
BRCA1-225ENST00000586385 KIF24Q5T7B8 1368 aa16.65■□□□□ 0.26
BRCA1-225ENST00000586385 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
BRCA1-225ENST00000586385 C5P01031 1676 aa16.65■□□□□ 0.26
BRCA1-225ENST00000586385 GIGYF1O75420 1035 aaPredicted RBP16.64■□□□□ 0.25
BRCA1-225ENST00000586385 PIGBQ92521 554 aa16.64■□□□□ 0.25
BRCA1-225ENST00000586385 GRIN3BO60391 1043 aa16.63■□□□□ 0.25
BRCA1-225ENST00000586385 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
BRCA1-225ENST00000586385 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
BRCA1-225ENST00000586385 NSD3Q9BZ95 1437 aa16.62■□□□□ 0.25
BRCA1-225ENST00000586385 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
BRCA1-225ENST00000586385 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
BRCA1-225ENST00000586385 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
BRCA1-225ENST00000586385 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
BRCA1-225ENST00000586385 ATP10DQ9P241 1426 aa16.61■□□□□ 0.25
BRCA1-225ENST00000586385 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
BRCA1-225ENST00000586385 FLAD1Q8NFF5 587 aa16.6■□□□□ 0.25
BRCA1-225ENST00000586385 ADCY9O60503 1353 aa16.6■□□□□ 0.25
BRCA1-225ENST00000586385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.59■□□□□ 0.25
BRCA1-225ENST00000586385 SMARCC1Q92922 1105 aaPredicted RBP16.59■□□□□ 0.25
BRCA1-225ENST00000586385 EYA1Q99502 592 aa16.59■□□□□ 0.25
BRCA1-225ENST00000586385 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
BRCA1-225ENST00000586385 PHF14O94880 888 aa16.58■□□□□ 0.24
BRCA1-225ENST00000586385 ITPK1Q13572 414 aa16.58■□□□□ 0.24
BRCA1-225ENST00000586385 AK7Q96M32 723 aa16.58■□□□□ 0.24
BRCA1-225ENST00000586385 WASHC2AQ641Q2 1341 aa16.58■□□□□ 0.24
BRCA1-225ENST00000586385 ITGB4P16144 1822 aa16.58■□□□□ 0.24
BRCA1-225ENST00000586385 ANKRD26Q9UPS8 1709 aa16.57■□□□□ 0.24
BRCA1-225ENST00000586385 LOC102724428A0A0B4J2F2 783 aa16.57■□□□□ 0.24
BRCA1-225ENST00000586385 SIK1P57059 783 aa16.57■□□□□ 0.24
BRCA1-225ENST00000586385 CDCA8Q53HL2 280 aa16.57■□□□□ 0.24
BRCA1-225ENST00000586385 ASAP1Q9ULH1 1129 aa16.57■□□□□ 0.24
BRCA1-225ENST00000586385 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
BRCA1-225ENST00000586385 PPM1GO15355 546 aaPredicted RBP16.56■□□□□ 0.24
BRCA1-225ENST00000586385 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
BRCA1-225ENST00000586385 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
BRCA1-225ENST00000586385 IGSF1Q8N6C5 1336 aa16.55■□□□□ 0.24
BRCA1-225ENST00000586385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.55■□□□□ 0.244e-6■■■■■ 27.4
BRCA1-225ENST00000586385 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
BRCA1-225ENST00000586385 PHKG2P15735 406 aa16.54■□□□□ 0.24
BRCA1-225ENST00000586385 SSFA2P28290 1259 aa16.54■□□□□ 0.24
BRCA1-225ENST00000586385 ATG3Q9NT62 314 aa16.54■□□□□ 0.24
BRCA1-225ENST00000586385 SLC4A9Q96Q91 983 aa16.53■□□□□ 0.24
BRCA1-225ENST00000586385 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
BRCA1-225ENST00000586385 KDRP35968 1356 aa16.52■□□□□ 0.24
BRCA1-225ENST00000586385 HMGB2P26583 209 aaKnown RBP16.52■□□□□ 0.24
BRCA1-225ENST00000586385 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
BRCA1-225ENST00000586385 TMOD3Q9NYL9 352 aa16.52■□□□□ 0.24
BRCA1-225ENST00000586385 GNPATO15228 680 aa16.51■□□□□ 0.23
BRCA1-225ENST00000586385 IFNL2Q8IZJ0 200 aa16.5■□□□□ 0.23
BRCA1-225ENST00000586385 ZNF526Q8TF50 670 aaPredicted RBP16.5■□□□□ 0.23
BRCA1-225ENST00000586385 ATP6V1AP38606 617 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms