RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 RALBP1Q15311 655 aa17.01■□□□□ 0.31
RETREG3-203ENST00000585894 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
RETREG3-203ENST00000585894 HMOX1P09601 288 aa17■□□□□ 0.31
RETREG3-203ENST00000585894 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
RETREG3-203ENST00000585894 U2SURPO15042 1029 aaKnown RBP16.99■□□□□ 0.31
RETREG3-203ENST00000585894 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
RETREG3-203ENST00000585894 CFAP53Q96M91 514 aa16.99■□□□□ 0.31
RETREG3-203ENST00000585894 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
RETREG3-203ENST00000585894 TNS1Q9HBL0 1735 aaKnown RBP16.99■□□□□ 0.31
RETREG3-203ENST00000585894 TRIM37O94972 964 aa16.98■□□□□ 0.31
RETREG3-203ENST00000585894 FAM196AQ6ZSG2 479 aa16.97■□□□□ 0.31
RETREG3-203ENST00000585894 PTF1AQ7RTS3 328 aa16.97■□□□□ 0.31
RETREG3-203ENST00000585894 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
RETREG3-203ENST00000585894 DOT1LQ8TEK3 1739 aa16.97■□□□□ 0.31
RETREG3-203ENST00000585894 KDRP35968 1356 aa16.96■□□□□ 0.31
RETREG3-203ENST00000585894 ACSBG1Q96GR2 724 aa16.95■□□□□ 0.3
RETREG3-203ENST00000585894 CYP27B1O15528 508 aa16.94■□□□□ 0.3
RETREG3-203ENST00000585894 TOGARAM1Q9Y4F4 1720 aa16.94■□□□□ 0.3
RETREG3-203ENST00000585894 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
RETREG3-203ENST00000585894 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
RETREG3-203ENST00000585894 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
RETREG3-203ENST00000585894 KCNQ2O43526 872 aa16.93■□□□□ 0.3
RETREG3-203ENST00000585894 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
RETREG3-203ENST00000585894 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
RETREG3-203ENST00000585894 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
RETREG3-203ENST00000585894 SPG7Q9UQ90 795 aa16.92■□□□□ 0.3
RETREG3-203ENST00000585894 BCL9O00512 1426 aa16.91■□□□□ 0.3
RETREG3-203ENST00000585894 BTAF1O14981 1849 aa16.91■□□□□ 0.3
RETREG3-203ENST00000585894 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
RETREG3-203ENST00000585894 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
RETREG3-203ENST00000585894 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
RETREG3-203ENST00000585894 ITGB4P16144 1822 aa16.9■□□□□ 0.3
RETREG3-203ENST00000585894 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
RETREG3-203ENST00000585894 ANP32CO43423 234 aa16.89■□□□□ 0.29
RETREG3-203ENST00000585894 PHKG2P15735 406 aa16.89■□□□□ 0.29
RETREG3-203ENST00000585894 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
RETREG3-203ENST00000585894 PLEKHO1Q53GL0 409 aaPredicted RBP16.89■□□□□ 0.29
RETREG3-203ENST00000585894 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
RETREG3-203ENST00000585894 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
RETREG3-203ENST00000585894 CCDC125Q86Z20 511 aa16.88■□□□□ 0.29
RETREG3-203ENST00000585894 SYTL4Q96C24 671 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-203ENST00000585894 RSPH6AQ9H0K4 717 aa16.88■□□□□ 0.29
RETREG3-203ENST00000585894 APBA3O96018 575 aa16.87■□□□□ 0.29
RETREG3-203ENST00000585894 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
RETREG3-203ENST00000585894 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
RETREG3-203ENST00000585894 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
RETREG3-203ENST00000585894 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
RETREG3-203ENST00000585894 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
RETREG3-203ENST00000585894 BCL11BQ9C0K0 894 aaPredicted RBP16.87■□□□□ 0.29
RETREG3-203ENST00000585894 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
RETREG3-203ENST00000585894 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
RETREG3-203ENST00000585894 BAG6P46379 1132 aa16.84■□□□□ 0.29
RETREG3-203ENST00000585894 KDM6AO15550 1401 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-203ENST00000585894 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
RETREG3-203ENST00000585894 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
RETREG3-203ENST00000585894 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
RETREG3-203ENST00000585894 MPRIPQ6WCQ1 1025 aa16.84■□□□□ 0.29
RETREG3-203ENST00000585894 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
RETREG3-203ENST00000585894 FCHSD2O94868 740 aa16.82■□□□□ 0.28
RETREG3-203ENST00000585894 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
RETREG3-203ENST00000585894 RREB1Q92766 1687 aa16.82■□□□□ 0.28
RETREG3-203ENST00000585894 RGPD3A6NKT7 1758 aaPredicted RBP16.81■□□□□ 0.28
RETREG3-203ENST00000585894 RGPD4Q7Z3J3 1758 aa16.81■□□□□ 0.28
RETREG3-203ENST00000585894 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
RETREG3-203ENST00000585894 NUP188Q5SRE5 1749 aa16.8■□□□□ 0.28
RETREG3-203ENST00000585894 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
RETREG3-203ENST00000585894 CCDC146Q8IYE0 955 aa16.8■□□□□ 0.28
RETREG3-203ENST00000585894 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
RETREG3-203ENST00000585894 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.28
RETREG3-203ENST00000585894 DCAF5Q96JK2 942 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 LGR6Q9HBX8 967 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 ADAMTS7Q9UKP4 1686 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 PIGBQ92521 554 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
RETREG3-203ENST00000585894 LY75O60449 1722 aa16.78■□□□□ 0.28
RETREG3-203ENST00000585894 HSP90AB1P08238 724 aaKnown RBP16.78■□□□□ 0.28
RETREG3-203ENST00000585894 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
RETREG3-203ENST00000585894 MAP3K5Q99683 1374 aa16.78■□□□□ 0.28
RETREG3-203ENST00000585894 PROM2Q8N271 834 aa16.77■□□□□ 0.28
RETREG3-203ENST00000585894 TMOD3Q9NYL9 352 aa16.77■□□□□ 0.28
RETREG3-203ENST00000585894 PLSCR1O15162 318 aa16.76■□□□□ 0.27
RETREG3-203ENST00000585894 KCNQ4P56696 695 aa16.76■□□□□ 0.27
RETREG3-203ENST00000585894 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
RETREG3-203ENST00000585894 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
RETREG3-203ENST00000585894 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
RETREG3-203ENST00000585894 CABP4P57796 275 aa16.75■□□□□ 0.27
RETREG3-203ENST00000585894 TXNRD1Q16881 649 aa16.75■□□□□ 0.27
RETREG3-203ENST00000585894 DIEXFQ68CQ4 756 aaKnown RBP16.75■□□□□ 0.27
RETREG3-203ENST00000585894 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
RETREG3-203ENST00000585894 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
RETREG3-203ENST00000585894 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
RETREG3-203ENST00000585894 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
RETREG3-203ENST00000585894 ASAP1Q9ULH1 1129 aa16.74■□□□□ 0.27
RETREG3-203ENST00000585894 SIPA1L3O60292 1781 aaPredicted RBP16.74■□□□□ 0.27
RETREG3-203ENST00000585894 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
RETREG3-203ENST00000585894 MCM10Q7L590 875 aa16.73■□□□□ 0.27
RETREG3-203ENST00000585894 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
RETREG3-203ENST00000585894 MRC1P22897 1456 aa16.73■□□□□ 0.27
RETREG3-203ENST00000585894 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms