RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PPP1R12CQ9BZL4 782 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 ATP13A2Q9NQ11 1180 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-203ENST00000585448 SCTRP47872 440 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 TRIM46Q7Z4K8 759 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-203ENST00000585448 CDCA7Q9BWT1 371 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-203ENST00000585448 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
SMAD4-203ENST00000585448 PALM3A6NDB9 673 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-203ENST00000585448 CBLBQ13191 982 aa8.92□□□□□ -0.98
SMAD4-203ENST00000585448 EML3Q32P44 896 aa8.92□□□□□ -0.98
SMAD4-203ENST00000585448 ERICH6BQ5W0A0 696 aa8.92□□□□□ -0.98
SMAD4-203ENST00000585448 MAFBQ9Y5Q3 323 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-203ENST00000585448 SPINT1O43278 529 aa8.91□□□□□ -0.98
SMAD4-203ENST00000585448 UPP2O95045 317 aa8.91□□□□□ -0.98
SMAD4-203ENST00000585448 KIFC2Q96AC6 838 aa8.91□□□□□ -0.98
SMAD4-203ENST00000585448 SENP2Q9HC62 589 aa8.91□□□□□ -0.98
SMAD4-203ENST00000585448 SERPINA10Q9UK55 444 aa8.91□□□□□ -0.98
SMAD4-203ENST00000585448 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-203ENST00000585448 GNRH1P01148 92 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 PTGIRP43119 386 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 NCOA4Q13772 614 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 USP17L2Q6R6M4 530 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 USP17L1Q7RTZ2 530 aa8.9□□□□□ -0.98
SMAD4-203ENST00000585448 TFIP11Q9UBB9 837 aaKnown RBP8.9□□□□□ -0.98
SMAD4-203ENST00000585448 SCARF1Q14162 830 aa8.89□□□□□ -0.99
SMAD4-203ENST00000585448 DACH1Q9UI36 760 aa8.89□□□□□ -0.99
SMAD4-203ENST00000585448 NOD1Q9Y239 953 aa8.89□□□□□ -0.99
SMAD4-203ENST00000585448 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
SMAD4-203ENST00000585448 OXLD1Q5BKU9 147 aa8.88□□□□□ -0.99
SMAD4-203ENST00000585448 CFAP70Q5T0N1 1121 aa8.88□□□□□ -0.99
SMAD4-203ENST00000585448 TRIM50Q86XT4 487 aa8.88□□□□□ -0.99
SMAD4-203ENST00000585448 TRIM47Q96LD4 638 aa8.88□□□□□ -0.99
SMAD4-203ENST00000585448 ESF1Q9H501 851 aaKnown RBP8.88□□□□□ -0.99
SMAD4-203ENST00000585448 BMP1P13497 986 aa8.87□□□□□ -0.99
SMAD4-203ENST00000585448 GPC1P35052 558 aa8.87□□□□□ -0.99
SMAD4-203ENST00000585448 ZFP42Q96MM3 310 aa8.87□□□□□ -0.99
SMAD4-203ENST00000585448 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
SMAD4-203ENST00000585448 PCDHGA11Q9Y5H2 935 aa8.87□□□□□ -0.99
SMAD4-203ENST00000585448 ATP1A2P50993 1020 aa8.86□□□□□ -0.99
SMAD4-203ENST00000585448 CLN3Q13286 438 aa8.86□□□□□ -0.99
SMAD4-203ENST00000585448 CCDC97Q96F63 343 aaPredicted RBP8.86□□□□□ -0.99
SMAD4-203ENST00000585448 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-203ENST00000585448 ESCO1Q5FWF5 840 aa8.85□□□□□ -0.99
SMAD4-203ENST00000585448 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-203ENST00000585448 NISCHQ9Y2I1 1504 aa8.85□□□□□ -0.99
SMAD4-203ENST00000585448 ARID3CA6NKF2 412 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 BMP2P12643 396 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 XAGE2Q96GT9 111 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 AGBL1Q96MI9 1066 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 PURBQ96QR8 312 aaKnown RBP8.84□□□□□ -0.99
SMAD4-203ENST00000585448 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 GMPR2Q9P2T1 348 aaKnown RBP8.84□□□□□ -0.99
SMAD4-203ENST00000585448 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
SMAD4-203ENST00000585448 HRH3Q9Y5N1 445 aa8.84□□□□□ -0.99
SMAD4-203ENST00000585448 A0A1W2PRU2 124 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 FAM196BA6NMK8 535 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
SMAD4-203ENST00000585448 GTF2IP78347 998 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 SRPK2P78362 688 aaKnown RBP8.83□□□□□ -1
SMAD4-203ENST00000585448 RELBQ01201 579 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 DEPDC4Q8N2C3 294 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 LARGE2Q8N3Y3 721 aa8.83□□□□□ -1
SMAD4-203ENST00000585448 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
SMAD4-203ENST00000585448 SCNN1DP51172 638 aa8.82□□□□□ -1
SMAD4-203ENST00000585448 SIX5Q8N196 739 aa8.82□□□□□ -1
SMAD4-203ENST00000585448 ETNK1Q9HBU6 452 aa8.82□□□□□ -1
SMAD4-203ENST00000585448 TTLL8A6PVC2 850 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 M0R2N6 131 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 ZBTB7BO15156 539 aaPredicted RBP8.81□□□□□ -1
SMAD4-203ENST00000585448 INHAP05111 366 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 SLC4A9Q96Q91 983 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
SMAD4-203ENST00000585448 TMEM229AB2RXF0 380 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 DKK1O94907 266 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 IL2RAP01589 272 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 CLDN10P78369 228 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 C6orf118Q5T5N4 469 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 FOXD4L5Q5VV16 416 aaPredicted RBP8.8□□□□□ -1
SMAD4-203ENST00000585448 RNF217Q8TC41 542 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 CNKSR1Q969H4 720 aa8.8□□□□□ -1
SMAD4-203ENST00000585448 ZNF395Q9H8N7 513 aaPredicted RBP8.8□□□□□ -1
SMAD4-203ENST00000585448 CTSOP43234 321 aaPredicted RBP8.79□□□□□ -1
SMAD4-203ENST00000585448 GDF10P55107 478 aa8.79□□□□□ -1
SMAD4-203ENST00000585448 ELOAQ14241 798 aaKnown RBP8.79□□□□□ -1
SMAD4-203ENST00000585448 OGFOD1Q8N543 542 aa8.79□□□□□ -1
SMAD4-203ENST00000585448 INSM2Q96T92 566 aaPredicted RBP8.79□□□□□ -1
SMAD4-203ENST00000585448 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
SMAD4-203ENST00000585448 SPATA31C2B4DYI2 1134 aa8.78□□□□□ -1
SMAD4-203ENST00000585448 C11orf95C9JLR9 678 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms