RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH8-214ENST00000585315 ARHGAP5Q13017 1502 aa8.59□□□□□ -1.03
CDH8-214ENST00000585315 SHTN1A0MZ66 631 aa8.59□□□□□ -1.04
CDH8-214ENST00000585315 ATP2B1P20020 1258 aa8.59□□□□□ -1.04
CDH8-214ENST00000585315 DDX19AQ9NUU7 478 aaKnown RBP8.59□□□□□ -1.04
CDH8-214ENST00000585315 CETN2P41208 172 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 RBM10P98175 930 aaKnown RBP8.58□□□□□ -1.04
CDH8-214ENST00000585315 CFAP100Q494V2 611 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 PHAXQ9H814 394 aaKnown RBP8.58□□□□□ -1.04
CDH8-214ENST00000585315 KIF6Q6ZMV9 814 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 DDX11Q96FC9 970 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 CABP2Q9NPB3 220 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 CCDC141Q6ZP82 1450 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 SRGAP3O43295 1099 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 TROQ12816 1431 aaPredicted RBP8.58□□□□□ -1.04
CDH8-214ENST00000585315 TUBB4BP68371 445 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 VPS36Q86VN1 386 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
CDH8-214ENST00000585315 HECW1Q76N89 1606 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 PRXQ9BXM0 1461 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 KAT6BQ8WYB5 2073 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 PPP1R12BO60237 982 aaPredicted RBP8.58□□□□□ -1.04
CDH8-214ENST00000585315 KIF5CO60282 957 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 DESP17661 470 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 FOSBP53539 338 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 CEP126Q9P2H0 1117 aa8.58□□□□□ -1.04
CDH8-214ENST00000585315 UVSSAQ2YD98 709 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 TAF4BQ92750 862 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 GRIN2BQ13224 1484 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 SYCE3A1L190 88 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 CCDC69A6NI79 296 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 BMP2KLQ5H9B9 411 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 CCDC102AQ96A19 550 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 ATF3P18847 181 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 LRRFIP2Q9Y608 721 aaKnown RBP8.57□□□□□ -1.04
CDH8-214ENST00000585315 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
CDH8-214ENST00000585315 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 KLHL40Q2TBA0 621 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 HSP90AB3PQ58FF7 597 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 MICALCLQ6ZW33 695 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 ZNF287Q9HBT7 754 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 FGFR1OPO95684 399 aaKnown RBP8.57□□□□□ -1.04
CDH8-214ENST00000585315 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
CDH8-214ENST00000585315 UBAC1Q9BSL1 405 aa8.57□□□□□ -1.04
CDH8-214ENST00000585315 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 SOGA3Q5TF21 947 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 PYM1Q9BRP8 204 aaKnown RBP8.56□□□□□ -1.04
CDH8-214ENST00000585315 JAKMIP3Q5VZ66 844 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 TSR2Q969E8 191 aaKnown RBP8.56□□□□□ -1.04
CDH8-214ENST00000585315 PAXBP1Q9Y5B6 917 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 WDR97A6NE52 1622 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 MAP3K1Q13233 1512 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 KIF20AO95235 890 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 CEBPZQ03701 1054 aaKnown RBP8.56□□□□□ -1.04
CDH8-214ENST00000585315 ABTB2Q8N961 1025 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 SLC12A5Q9H2X9 1139 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 SULT6B1Q6IMI4 303 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 SLC26A8Q96RN1 970 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 EIF5P55010 431 aaKnown RBP8.56□□□□□ -1.04
CDH8-214ENST00000585315 HS1BP3Q53T59 392 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 WWC2Q6AWC2 1192 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 SYTL4Q96C24 671 aaPredicted RBP8.56□□□□□ -1.04
CDH8-214ENST00000585315 MX1P20591 662 aa8.56□□□□□ -1.04
CDH8-214ENST00000585315 ENOX2Q16206 610 aaKnown RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 KIAA1328Q86T90 577 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 GOLGA6L10A0A0M3HER8 536 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 GBP2P32456 591 aaPredicted RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 SPA17Q15506 151 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 DYDC1Q8WWB3 177 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 LIMCH1Q9UPQ0 1083 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 RAB34Q9BZG1 259 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 IKQ13123 557 aaPredicted RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 CNNM1Q9NRU3 951 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 TATP17735 454 aaPredicted RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 TMPOP42166 694 aaKnown RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 PAFAH1B1P43034 410 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 AACSQ86V21 672 aa8.55□□□□□ -1.04
CDH8-214ENST00000585315 NAA15Q9BXJ9 866 aaKnown RBP8.55□□□□□ -1.04
CDH8-214ENST00000585315 NBPF8Q3BBV2 869 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 TMEM132EQ6IEE7 984 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 EHBP1Q8NDI1 1231 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 C1orf115Q9H7X2 142 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 TUBBP07437 444 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 CASTP20810 708 aaKnown RBP8.54□□□□□ -1.04
CDH8-214ENST00000585315 NBPF1Q3BBV0 1214 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 NSD2O96028 1365 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 TOP1P11387 765 aaKnown RBP8.54□□□□□ -1.04
CDH8-214ENST00000585315 CLCN1P35523 988 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 LUZP1Q86V48 1076 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 USO1O60763 962 aaKnown RBP8.54□□□□□ -1.04
CDH8-214ENST00000585315 RARSP54136 660 aaKnown RBP8.54□□□□□ -1.04
CDH8-214ENST00000585315 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 CNKSR2Q8WXI2 1034 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 POTEJP0CG39 1038 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 MPHOSPH8Q99549 860 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 AKAP2Q9Y2D5 859 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 NAIPQ13075 1403 aa8.54□□□□□ -1.04
CDH8-214ENST00000585315 BMS1Q14692 1282 aaKnown RBP8.53□□□□□ -1.04
CDH8-214ENST00000585315 FKBP15Q5T1M5 1219 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms