RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.57
MSI2-218ENST00000583821 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
MSI2-218ENST00000583821 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
MSI2-218ENST00000583821 KCNH5Q8NCM2 988 aa11.51□□□□□ -0.57
MSI2-218ENST00000583821 ANO8Q9HCE9 1232 aaPredicted RBP11.51□□□□□ -0.57
MSI2-218ENST00000583821 A0A1W2PP64 1363 aa11.51□□□□□ -0.57
MSI2-218ENST00000583821 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
MSI2-218ENST00000583821 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
MSI2-218ENST00000583821 TMC1Q8TDI8 760 aa11.5□□□□□ -0.57
MSI2-218ENST00000583821 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
MSI2-218ENST00000583821 USP31Q70CQ4 1352 aa11.5□□□□□ -0.57
MSI2-218ENST00000583821 NBPF14Q5TI25 921 aa11.49□□□□□ -0.57
MSI2-218ENST00000583821 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
MSI2-218ENST00000583821 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
MSI2-218ENST00000583821 DOT1LQ8TEK3 1739 aa11.49□□□□□ -0.57
MSI2-218ENST00000583821 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
MSI2-218ENST00000583821 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
MSI2-218ENST00000583821 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
MSI2-218ENST00000583821 FAM212AQ96EL1 285 aa11.48□□□□□ -0.57
MSI2-218ENST00000583821 BCL11BQ9C0K0 894 aaPredicted RBP11.48□□□□□ -0.57
MSI2-218ENST00000583821 PDGFDQ9GZP0 370 aaPredicted RBP11.48□□□□□ -0.57
MSI2-218ENST00000583821 SLC12A5Q9H2X9 1139 aa11.48□□□□□ -0.57
MSI2-218ENST00000583821 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
MSI2-218ENST00000583821 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
MSI2-218ENST00000583821 BCL9O00512 1426 aa11.47□□□□□ -0.57
MSI2-218ENST00000583821 ERBB3P21860 1342 aa11.47□□□□□ -0.57
MSI2-218ENST00000583821 GABBR2O75899 941 aa11.47□□□□□ -0.57
MSI2-218ENST00000583821 KCNQ2O43526 872 aa11.46□□□□□ -0.57
MSI2-218ENST00000583821 HDGFL2Q7Z4V5 671 aaPredicted RBP11.46□□□□□ -0.57
MSI2-218ENST00000583821 CDCA7Q9BWT1 371 aaPredicted RBP11.46□□□□□ -0.57
MSI2-218ENST00000583821 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.57
MSI2-218ENST00000583821 C11orf95C9JLR9 678 aaPredicted RBP11.45□□□□□ -0.58
MSI2-218ENST00000583821 PLSCR1O15162 318 aa11.45□□□□□ -0.58
MSI2-218ENST00000583821 PYGBP11216 843 aa11.45□□□□□ -0.58
MSI2-218ENST00000583821 ANKRD24Q8TF21 1146 aa11.45□□□□□ -0.58
MSI2-218ENST00000583821 ACSBG1Q96GR2 724 aa11.45□□□□□ -0.58
MSI2-218ENST00000583821 EXOC5O00471 708 aa11.44□□□□□ -0.58
MSI2-218ENST00000583821 TESK2Q96S53 571 aa11.44□□□□□ -0.58
MSI2-218ENST00000583821 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 GALR2O43603 387 aaPredicted RBP11.43□□□□□ -0.58
MSI2-218ENST00000583821 ZBTB7AO95365 584 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 TXNRD1Q16881 649 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 SPON1Q9HCB6 807 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 TERF2IPQ9NYB0 399 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 PPP1R1BQ9UD71 204 aaPredicted RBP11.43□□□□□ -0.58
MSI2-218ENST00000583821 UTRNP46939 3433 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 QSER1Q2KHR3 1735 aa11.43□□□□□ -0.58
MSI2-218ENST00000583821 FBLN1P23142 703 aa11.42□□□□□ -0.58
MSI2-218ENST00000583821 KIF12Q96FN5 646 aa11.42□□□□□ -0.58
MSI2-218ENST00000583821 LTV1Q96GA3 475 aaPredicted RBP11.42□□□□□ -0.58
MSI2-218ENST00000583821 LY75O60449 1722 aa11.42□□□□□ -0.58
MSI2-218ENST00000583821 MAP3K13O43283 966 aa11.41□□□□□ -0.58
MSI2-218ENST00000583821 IL2RBP14784 551 aa11.41□□□□□ -0.58
MSI2-218ENST00000583821 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
MSI2-218ENST00000583821 MEGF6O75095 1541 aa11.4□□□□□ -0.58
MSI2-218ENST00000583821 USP47Q96K76 1375 aa11.4□□□□□ -0.59
MSI2-218ENST00000583821 GOLGB1Q14789 3259 aaKnown RBP11.4□□□□□ -0.59
MSI2-218ENST00000583821 MAP3K19Q56UN5 1328 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 IP6K1Q92551 441 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 MS4A3Q96HJ5 214 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 TRPC6Q9Y210 931 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
MSI2-218ENST00000583821 COL24A1Q17RW2 1714 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 TOGARAM1Q9Y4F4 1720 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 PTGER2P43116 358 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 SLC15A2Q16348 729 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 ZNF827Q17R98 1081 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
MSI2-218ENST00000583821 HOXC9P31274 260 aa11.37□□□□□ -0.59
MSI2-218ENST00000583821 GSE1Q14687 1217 aa11.37□□□□□ -0.59
MSI2-218ENST00000583821 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
MSI2-218ENST00000583821 COG3Q96JB2 828 aa11.37□□□□□ -0.59
MSI2-218ENST00000583821 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
MSI2-218ENST00000583821 ITGB4P16144 1822 aa11.37□□□□□ -0.59
MSI2-218ENST00000583821 CHD4Q14839 1912 aa11.37□□□□□ -0.59
MSI2-218ENST00000583821 C5P01031 1676 aa11.36□□□□□ -0.59
MSI2-218ENST00000583821 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
MSI2-218ENST00000583821 USHBP1Q8N6Y0 703 aa11.36□□□□□ -0.59
MSI2-218ENST00000583821 LRRC4BQ9NT99 713 aa11.36□□□□□ -0.59
MSI2-218ENST00000583821 TAF1LQ8IZX4 1826 aa11.36□□□□□ -0.59
MSI2-218ENST00000583821 NSD2O96028 1365 aa11.36□□□□□ -0.59
MSI2-218ENST00000583821 PKD1L3Q7Z443 1732 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 MAP2P11137 1827 aaKnown RBP11.35□□□□□ -0.59
MSI2-218ENST00000583821 YY1P25490 414 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 AMPHP49418 695 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 KCNQ4P56696 695 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
MSI2-218ENST00000583821 FYB1O15117 783 aa11.33□□□□□ -0.6
MSI2-218ENST00000583821 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
MSI2-218ENST00000583821 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
MSI2-218ENST00000583821 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
MSI2-218ENST00000583821 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
MSI2-218ENST00000583821 MTFR1LQ9H019 292 aa11.33□□□□□ -0.6
MSI2-218ENST00000583821 PCDHB8Q9UN66 801 aa11.33□□□□□ -0.6
MSI2-218ENST00000583821 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
MSI2-218ENST00000583821 PRIM1P49642 420 aaKnown RBP11.32□□□□□ -0.6
MSI2-218ENST00000583821 TMF1P82094 1093 aa11.32□□□□□ -0.6
MSI2-218ENST00000583821 NBPF6Q5VWK0 638 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms