RNA–Protein interactions for RNA: ENST00000583499.1

ARHGDIA-213, Transcript of Rho GDP dissociation inhibitor alpha, human

TSL 2

Gene ARHGDIA, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGDIA-213	ENST00000583499	FAM196A	Q6ZSG2	479 aa		32.72	■■■□□ 2.83
ARHGDIA-213	ENST00000583499	TRIM37	O94972	964 aa		32.71	■■■□□ 2.83
ARHGDIA-213	ENST00000583499	EXOC5	O00471	708 aa		32.69	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	MTHFS	P49914	203 aa		32.69	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	ITGB4	P16144	1822 aa		32.67	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	PARD3	Q8TEW0	1356 aa		32.67	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	CCDC125	Q86Z20	511 aa		32.66	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	IL13	P35225	146 aa		32.65	■■■□□ 2.82
ARHGDIA-213	ENST00000583499	VIRMA	Q69YN4	1812 aa	Known RBP	32.63	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	DDX10	Q13206	875 aa	Known RBP	32.63	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	AEBP1	Q8IUX7	1158 aa		32.63	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	KDR	P35968	1356 aa		32.62	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	KAT6B	Q8WYB5	2073 aa		32.61	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	KCNQ2	O43526	872 aa		32.59	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	ZCRB1	Q8TBF4	217 aa	Known RBP	32.59	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	RAPGEF4	Q8WZA2	1011 aa		32.59	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	TAT	P17735	454 aa	Predicted RBP	32.58	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	PPP2R1A	P30153	589 aa		32.58	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	EN1	Q05925	392 aa	Predicted RBP	32.58	■■■□□ 2.81
ARHGDIA-213	ENST00000583499	DDX54	Q8TDD1	881 aa	Known RBP	32.57	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	CYP27B1	O15528	508 aa		32.56	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	ACSBG1	Q96GR2	724 aa		32.56	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	LY75	O60449	1722 aa		32.56	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	CAMKK2	Q96RR4	588 aa		32.54	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	PAPPA	Q13219	1627 aa		32.54	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	SF3B2	Q13435	895 aa	Known RBP	32.53	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	EZH2	Q15910	746 aa	Known RBP	32.53	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	BAG6	P46379	1132 aa		32.52	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	PLEKHG2	Q9H7P9	1386 aa		32.52	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	PCDH11X	Q9BZA7	1347 aa		32.51	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	PCDH11Y	Q9BZA8	1340 aa		32.51	■■■□□ 2.8
ARHGDIA-213	ENST00000583499	APBA3	O96018	575 aa		32.51	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.51	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	SCN11A	Q9UI33	1791 aa		32.5	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	ADAMTS7	Q9UKP4	1686 aa		32.49	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	SULT6B1	Q6IMI4	303 aa		32.48	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	KDM6A	O15550	1401 aa	Predicted RBP	32.46	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	DIAPH1	O60610	1272 aa	Known RBP	32.46	■■■□□ 2.79
ARHGDIA-213	ENST00000583499	HMOX1	P09601	288 aa		32.44	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	TUBGCP6	Q96RT7	1819 aa		32.44	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	PHKG2	P15735	406 aa		32.41	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	PROM2	Q8N271	834 aa		32.4	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	TAF1L	Q8IZX4	1826 aa		32.4	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	PRIM1	P49642	420 aa	Known RBP	32.39	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	NKX1-1	Q15270	411 aa	Predicted RBP	32.39	■■■□□ 2.78
ARHGDIA-213	ENST00000583499	SPG7	Q9UQ90	795 aa		32.38	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	PLSCR1	O15162	318 aa		32.37	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	CASZ1	Q86V15	1759 aa		32.36	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	C5	P01031	1676 aa		32.35	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	SIPA1L3	O60292	1781 aa	Predicted RBP	32.35	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	DLG5	Q8TDM6	1919 aa		32.34	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.34	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	MRC1	P22897	1456 aa		32.34	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	U2SURP	O15042	1029 aa	Known RBP	32.33	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.33	■■■□□ 2.77
ARHGDIA-213	ENST00000583499	SYTL4	Q96C24	671 aa	Predicted RBP	32.32	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	IFNL2	Q8IZJ0	200 aa		32.31	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	RSPH6A	Q9H0K4	717 aa		32.31	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	RALBP1	Q15311	655 aa		32.3	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	CFAP53	Q96M91	514 aa		32.3	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	QSER1	Q2KHR3	1735 aa		32.29	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	TXNRD1	Q16881	649 aa		32.29	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.29	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.28	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.27	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	PSD	A5PKW4	1024 aa	Predicted RBP	32.27	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	LRRC4B	Q9NT99	713 aa		32.27	■■■□□ 2.76
ARHGDIA-213	ENST00000583499	MTHFSD	Q2M296	383 aa	Known RBP	32.26	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	AMOT	Q4VCS5	1084 aa		32.26	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	PIGB	Q92521	554 aa		32.24	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	COL5A3	P25940	1745 aa	Predicted RBP	32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	UBR2	Q8IWV8	1755 aa		32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	KCNQ4	P56696	695 aa		32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	MPRIP	Q6WCQ1	1025 aa		32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	PHACTR3	Q96KR7	559 aa		32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	TJP1	Q07157	1748 aa		32.23	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	CIC	Q96RK0	1608 aa	Predicted RBP	32.22	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	ZNF831	Q5JPB2	1677 aa		32.22	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	PRKAR2B	P31323	418 aa		32.22	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	LRP5	O75197	1615 aa		32.22	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	PALLD	Q8WX93	1383 aa		32.21	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	R3HDM1	Q15032	1099 aa	Known RBP	32.21	■■■□□ 2.75
ARHGDIA-213	ENST00000583499	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.19	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.19	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	DCAF5	Q96JK2	942 aa		32.19	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	C4B	P0C0L5	1744 aa		32.19	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	UBR3	Q6ZT12	1888 aa		32.17	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	ZNF827	Q17R98	1081 aa		32.17	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	AKAP4	Q5JQC9	854 aa		32.17	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	SRCAP	Q6ZRS2	3230 aa		32.16	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	C1orf141	Q5JVX7	400 aa		32.15	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	LGR6	Q9HBX8	967 aa		32.15	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	NUDC	Q9Y266	331 aa		32.15	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	MAP3K5	Q99683	1374 aa		32.15	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	TMOD3	Q9NYL9	352 aa		32.14	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	ASAP1	Q9ULH1	1129 aa		32.14	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	KCP	Q6ZWJ8	1503 aa		32.14	■■■□□ 2.74
ARHGDIA-213	ENST00000583499	HSP90AB1	P08238	724 aa	Known RBP	32.12	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms