RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
SUPT6H-208ENST00000583340 KAT6BQ8WYB5 2073 aa11.54□□□□□ -0.56
SUPT6H-208ENST00000583340 MEGF6O75095 1541 aa11.54□□□□□ -0.56
SUPT6H-208ENST00000583340 PLSCR1O15162 318 aa11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 HMGB2P26583 209 aaKnown RBP11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 EYA1Q99502 592 aa11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.56
SUPT6H-208ENST00000583340 NCAPD2Q15021 1401 aa11.52□□□□□ -0.56
SUPT6H-208ENST00000583340 RGPD2P0DJD1 1756 aa11.52□□□□□ -0.57
SUPT6H-208ENST00000583340 MTHFSP49914 203 aa11.52□□□□□ -0.57
SUPT6H-208ENST00000583340 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
SUPT6H-208ENST00000583340 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.57
SUPT6H-208ENST00000583340 SBF2Q86WG5 1849 aa11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 CNGB1Q14028 1251 aaPredicted RBP11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 RGPD3A6NKT7 1758 aaPredicted RBP11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 RGPD4Q7Z3J3 1758 aa11.51□□□□□ -0.57
SUPT6H-208ENST00000583340 NHSQ6T4R5 1651 aa11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 DIAPH1O60610 1272 aaKnown RBP11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 HSP90AB1P08238 724 aaKnown RBP11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 AMOTQ4VCS5 1084 aa11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 PLEKHO1Q53GL0 409 aaPredicted RBP11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 SYTL4Q96C24 671 aaPredicted RBP11.5□□□□□ -0.57
SUPT6H-208ENST00000583340 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
SUPT6H-208ENST00000583340 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
SUPT6H-208ENST00000583340 CENPBP07199 599 aaPredicted RBP11.48□□□□□ -0.57
SUPT6H-208ENST00000583340 IL13P35225 146 aa11.48□□□□□ -0.57
SUPT6H-208ENST00000583340 PKD1L3Q7Z443 1732 aa11.47□□□□□ -0.57
SUPT6H-208ENST00000583340 KCNQ2O43526 872 aa11.47□□□□□ -0.57
SUPT6H-208ENST00000583340 PRIM1P49642 420 aaKnown RBP11.47□□□□□ -0.57
SUPT6H-208ENST00000583340 C1orf141Q5JVX7 400 aa11.47□□□□□ -0.57
SUPT6H-208ENST00000583340 SULT6B1Q6IMI4 303 aa11.47□□□□□ -0.57
SUPT6H-208ENST00000583340 KDRP35968 1356 aa11.46□□□□□ -0.57
SUPT6H-208ENST00000583340 SLC27A3Q5K4L6 730 aa11.46□□□□□ -0.57
SUPT6H-208ENST00000583340 MIER1Q8N108 512 aa11.46□□□□□ -0.57
SUPT6H-208ENST00000583340 SMARCC1Q92922 1105 aaPredicted RBP11.46□□□□□ -0.57
SUPT6H-208ENST00000583340 RREB1Q92766 1687 aa11.46□□□□□ -0.58
SUPT6H-208ENST00000583340 U2SURPO15042 1029 aaKnown RBP11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 CYP27B1O15528 508 aa11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 NKX1-1Q15270 411 aaPredicted RBP11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 RALBP1Q15311 655 aa11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 ZNF530Q6P9A1 599 aaPredicted RBP11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 SHANK3Q9BYB0 1731 aa11.45□□□□□ -0.58
SUPT6H-208ENST00000583340 BTAF1O14981 1849 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 DOT1LQ8TEK3 1739 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 PHKG2P15735 406 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 DCAF5Q96JK2 942 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 TMOD3Q9NYL9 352 aa11.44□□□□□ -0.58
SUPT6H-208ENST00000583340 NEFMP07197 916 aa11.43□□□□□ -0.58
SUPT6H-208ENST00000583340 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
SUPT6H-208ENST00000583340 PTF1AQ7RTS3 328 aa11.43□□□□□ -0.58
SUPT6H-208ENST00000583340 AEBP1Q8IUX7 1158 aa11.43□□□□□ -0.58
SUPT6H-208ENST00000583340 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
SUPT6H-208ENST00000583340 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
SUPT6H-208ENST00000583340 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
SUPT6H-208ENST00000583340 HMOX1P09601 288 aa11.42□□□□□ -0.58
SUPT6H-208ENST00000583340 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
SUPT6H-208ENST00000583340 AKAP4Q5JQC9 854 aa11.41□□□□□ -0.58
SUPT6H-208ENST00000583340 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
SUPT6H-208ENST00000583340 PNNQ9H307 717 aaKnown RBP11.41□□□□□ -0.58
SUPT6H-208ENST00000583340 CCNL1Q9UK58 526 aaPredicted RBP11.41□□□□□ -0.58
SUPT6H-208ENST00000583340 U2AF1L5P0DN76 240 aaPredicted RBP11.4□□□□□ -0.58
SUPT6H-208ENST00000583340 CABP4P57796 275 aa11.4□□□□□ -0.58
SUPT6H-208ENST00000583340 U2AF1Q01081 240 aaKnown RBP eCLIP11.4□□□□□ -0.58
SUPT6H-208ENST00000583340 PALLDQ8WX93 1383 aa11.4□□□□□ -0.59
SUPT6H-208ENST00000583340 ANP32CO43423 234 aa11.39□□□□□ -0.59
SUPT6H-208ENST00000583340 SLC15A2Q16348 729 aa11.39□□□□□ -0.59
SUPT6H-208ENST00000583340 PROM2Q8N271 834 aa11.39□□□□□ -0.59
SUPT6H-208ENST00000583340 PIGBQ92521 554 aa11.39□□□□□ -0.59
SUPT6H-208ENST00000583340 FCHSD2O94868 740 aa11.38□□□□□ -0.59
SUPT6H-208ENST00000583340 MYBBP1AQ9BQG0 1328 aaKnown RBP11.37□□□□□ -0.59
SUPT6H-208ENST00000583340 SPON1Q9HCB6 807 aa11.37□□□□□ -0.59
SUPT6H-208ENST00000583340 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
SUPT6H-208ENST00000583340 TFCP2L1Q9NZI6 479 aa11.37□□□□□ -0.59
SUPT6H-208ENST00000583340 ITGB4P16144 1822 aa11.37□□□□□ -0.59
SUPT6H-208ENST00000583340 LY75O60449 1722 aa11.36□□□□□ -0.59
SUPT6H-208ENST00000583340 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
SUPT6H-208ENST00000583340 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
SUPT6H-208ENST00000583340 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
SUPT6H-208ENST00000583340 LRP5O75197 1615 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 LOC102724428A0A0B4J2F2 783 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 GNAT3A8MTJ3 354 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 SIK1P57059 783 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 MTHFSDQ2M296 383 aaKnown RBP11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 RTF1Q92541 710 aaKnown RBP11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 AK7Q96M32 723 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 RSPH6AQ9H0K4 717 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 LRRC4BQ9NT99 713 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 MAP3K5Q99683 1374 aa11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
SUPT6H-208ENST00000583340 RNMTO43148 476 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms