RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 IL13P35225 146 aa24.58■■□□□ 1.53
LIMD2-211ENST00000583211 MARCH10Q8NA82 808 aaPredicted RBP24.57■■□□□ 1.52
LIMD2-211ENST00000583211 RALBP1Q15311 655 aa24.56■■□□□ 1.52
LIMD2-211ENST00000583211 DIAPH1O60610 1272 aaKnown RBP24.55■■□□□ 1.52
LIMD2-211ENST00000583211 ZCRB1Q8TBF4 217 aaKnown RBP24.54■■□□□ 1.52
LIMD2-211ENST00000583211 CFAP53Q96M91 514 aa24.54■■□□□ 1.52
LIMD2-211ENST00000583211 KDRP35968 1356 aa24.54■■□□□ 1.52
LIMD2-211ENST00000583211 KAT6BQ8WYB5 2073 aa24.54■■□□□ 1.52
LIMD2-211ENST00000583211 NHSQ6T4R5 1651 aa24.53■■□□□ 1.52
LIMD2-211ENST00000583211 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
LIMD2-211ENST00000583211 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.51■■□□□ 1.51
LIMD2-211ENST00000583211 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
LIMD2-211ENST00000583211 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
LIMD2-211ENST00000583211 DOT1LQ8TEK3 1739 aa24.49■■□□□ 1.51
LIMD2-211ENST00000583211 DDX54Q8TDD1 881 aaKnown RBP24.49■■□□□ 1.51
LIMD2-211ENST00000583211 RGPD3A6NKT7 1758 aaPredicted RBP24.48■■□□□ 1.51
LIMD2-211ENST00000583211 TRIM37O94972 964 aa24.48■■□□□ 1.51
LIMD2-211ENST00000583211 SULT6B1Q6IMI4 303 aa24.48■■□□□ 1.51
LIMD2-211ENST00000583211 RGPD4Q7Z3J3 1758 aa24.48■■□□□ 1.51
LIMD2-211ENST00000583211 SPG7Q9UQ90 795 aa24.48■■□□□ 1.51
LIMD2-211ENST00000583211 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
LIMD2-211ENST00000583211 MYBBP1AQ9BQG0 1328 aaKnown RBP24.44■■□□□ 1.5
LIMD2-211ENST00000583211 BCL11BQ9C0K0 894 aaPredicted RBP24.44■■□□□ 1.5
LIMD2-211ENST00000583211 BTAF1O14981 1849 aa24.44■■□□□ 1.5
LIMD2-211ENST00000583211 ITGB4P16144 1822 aa24.43■■□□□ 1.5
LIMD2-211ENST00000583211 BAG6P46379 1132 aa24.43■■□□□ 1.5
LIMD2-211ENST00000583211 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
LIMD2-211ENST00000583211 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
LIMD2-211ENST00000583211 TOGARAM1Q9Y4F4 1720 aa24.42■■□□□ 1.5
LIMD2-211ENST00000583211 CYP27B1O15528 508 aa24.42■■□□□ 1.5
LIMD2-211ENST00000583211 AMOTQ4VCS5 1084 aa24.42■■□□□ 1.5
LIMD2-211ENST00000583211 PLEKHO1Q53GL0 409 aaPredicted RBP24.42■■□□□ 1.5
LIMD2-211ENST00000583211 VIRMAQ69YN4 1812 aaKnown RBP24.42■■□□□ 1.5
LIMD2-211ENST00000583211 U2SURPO15042 1029 aaKnown RBP24.41■■□□□ 1.5
LIMD2-211ENST00000583211 HMOX1P09601 288 aa24.4■■□□□ 1.5
LIMD2-211ENST00000583211 APBA3O96018 575 aa24.39■■□□□ 1.49
LIMD2-211ENST00000583211 NKX1-1Q15270 411 aaPredicted RBP24.39■■□□□ 1.49
LIMD2-211ENST00000583211 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.49
LIMD2-211ENST00000583211 RREB1Q92766 1687 aa24.39■■□□□ 1.49
LIMD2-211ENST00000583211 DEFB132Q7Z7B7 95 aa24.38■■□□□ 1.49
LIMD2-211ENST00000583211 PHKG2P15735 406 aa24.37■■□□□ 1.49
LIMD2-211ENST00000583211 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
LIMD2-211ENST00000583211 SCN11AQ9UI33 1791 aa24.36■■□□□ 1.49
LIMD2-211ENST00000583211 PLSCR1O15162 318 aa24.35■■□□□ 1.49
LIMD2-211ENST00000583211 KCNQ2O43526 872 aa24.35■■□□□ 1.49
LIMD2-211ENST00000583211 PTF1AQ7RTS3 328 aa24.35■■□□□ 1.49
LIMD2-211ENST00000583211 HSP90AB1P08238 724 aaKnown RBP24.34■■□□□ 1.49
LIMD2-211ENST00000583211 U2AF1L5P0DN76 240 aaPredicted RBP24.34■■□□□ 1.49
LIMD2-211ENST00000583211 U2AF1Q01081 240 aaKnown RBP eCLIP24.34■■□□□ 1.49
LIMD2-211ENST00000583211 EN1Q05925 392 aaPredicted RBP24.34■■□□□ 1.49
LIMD2-211ENST00000583211 NUP188Q5SRE5 1749 aa24.33■■□□□ 1.49
LIMD2-211ENST00000583211 ZNF530Q6P9A1 599 aaPredicted RBP24.33■■□□□ 1.49
LIMD2-211ENST00000583211 CAMKK2Q96RR4 588 aa24.33■■□□□ 1.49
LIMD2-211ENST00000583211 FCHSD2O94868 740 aa24.32■■□□□ 1.48
LIMD2-211ENST00000583211 RSPH6AQ9H0K4 717 aa24.32■■□□□ 1.48
LIMD2-211ENST00000583211 LY75O60449 1722 aa24.32■■□□□ 1.48
LIMD2-211ENST00000583211 PRIM1P49642 420 aaKnown RBP24.31■■□□□ 1.48
LIMD2-211ENST00000583211 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
LIMD2-211ENST00000583211 SYTL4Q96C24 671 aaPredicted RBP24.31■■□□□ 1.48
LIMD2-211ENST00000583211 EZH2Q15910 746 aaKnown RBP24.3■■□□□ 1.48
LIMD2-211ENST00000583211 DCAF5Q96JK2 942 aa24.3■■□□□ 1.48
LIMD2-211ENST00000583211 ADAMTS7Q9UKP4 1686 aa24.3■■□□□ 1.48
LIMD2-211ENST00000583211 ANP32CO43423 234 aa24.29■■□□□ 1.48
LIMD2-211ENST00000583211 PRKAR2BP31323 418 aa24.28■■□□□ 1.48
LIMD2-211ENST00000583211 AKAP4Q5JQC9 854 aa24.28■■□□□ 1.48
LIMD2-211ENST00000583211 KDM6AO15550 1401 aaPredicted RBP24.27■■□□□ 1.48
LIMD2-211ENST00000583211 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
LIMD2-211ENST00000583211 GAS2L2Q8NHY3 880 aa24.26■■□□□ 1.47
LIMD2-211ENST00000583211 DLG5Q8TDM6 1919 aa24.25■■□□□ 1.47
LIMD2-211ENST00000583211 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
LIMD2-211ENST00000583211 PNNQ9H307 717 aaKnown RBP24.25■■□□□ 1.47
LIMD2-211ENST00000583211 MPRIPQ6WCQ1 1025 aa24.24■■□□□ 1.47
LIMD2-211ENST00000583211 PHACTR3Q96KR7 559 aa24.23■■□□□ 1.47
LIMD2-211ENST00000583211 TMOD3Q9NYL9 352 aa24.23■■□□□ 1.47
LIMD2-211ENST00000583211 MRC1P22897 1456 aa24.21■■□□□ 1.47
LIMD2-211ENST00000583211 MAP3K5Q99683 1374 aa24.21■■□□□ 1.47
LIMD2-211ENST00000583211 NEFMP07197 916 aa24.21■■□□□ 1.47
LIMD2-211ENST00000583211 TXNRD1Q16881 649 aa24.21■■□□□ 1.47
LIMD2-211ENST00000583211 PROM2Q8N271 834 aa24.2■■□□□ 1.46
LIMD2-211ENST00000583211 PIGBQ92521 554 aa24.2■■□□□ 1.46
LIMD2-211ENST00000583211 SIPA1L3O60292 1781 aaPredicted RBP24.2■■□□□ 1.46
LIMD2-211ENST00000583211 WDR43Q15061 677 aaKnown RBP eCLIP24.19■■□□□ 1.46
LIMD2-211ENST00000583211 PLEKHF1Q96S99 279 aa24.19■■□□□ 1.46
LIMD2-211ENST00000583211 TAF1LQ8IZX4 1826 aa24.19■■□□□ 1.46
LIMD2-211ENST00000583211 PAPPAQ13219 1627 aa24.18■■□□□ 1.46
LIMD2-211ENST00000583211 GNAT3A8MTJ3 354 aa24.18■■□□□ 1.46
LIMD2-211ENST00000583211 SMARCC1Q92922 1105 aaPredicted RBP24.18■■□□□ 1.46
LIMD2-211ENST00000583211 CABP4P57796 275 aa24.17■■□□□ 1.46
LIMD2-211ENST00000583211 SLC27A3Q5K4L6 730 aa24.17■■□□□ 1.46
LIMD2-211ENST00000583211 PALLDQ8WX93 1383 aa24.16■■□□□ 1.46
LIMD2-211ENST00000583211 C5P01031 1676 aa24.16■■□□□ 1.46
LIMD2-211ENST00000583211 ZNF831Q5JPB2 1677 aa24.16■■□□□ 1.46
LIMD2-211ENST00000583211 RNMTO43148 476 aaKnown RBP24.16■■□□□ 1.46
LIMD2-211ENST00000583211 MAPK8IP3Q9UPT6 1336 aa24.15■■□□□ 1.46
LIMD2-211ENST00000583211 LGR6Q9HBX8 967 aa24.15■■□□□ 1.46
LIMD2-211ENST00000583211 NBPF14Q5TI25 921 aa24.14■■□□□ 1.45
LIMD2-211ENST00000583211 HMGB2P26583 209 aaKnown RBP24.13■■□□□ 1.45
LIMD2-211ENST00000583211 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
LIMD2-211ENST00000583211 SLC52A2Q9HAB3 445 aa24.13■■□□□ 1.45
LIMD2-211ENST00000583211 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms