RNA–Protein interactions for RNA: ENST00000582665.5

NDEL1-214, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-214ENST00000582665 HMOX1P09601 288 aa13.4□□□□□ -0.26
NDEL1-214ENST00000582665 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
NDEL1-214ENST00000582665 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
NDEL1-214ENST00000582665 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
NDEL1-214ENST00000582665 MIER1Q8N108 512 aa13.4□□□□□ -0.26
NDEL1-214ENST00000582665 EXOC5O00471 708 aa13.39□□□□□ -0.27
NDEL1-214ENST00000582665 DDB1Q16531 1140 aa13.39□□□□□ -0.27
NDEL1-214ENST00000582665 MRS2Q9HD23 443 aa13.39□□□□□ -0.27
NDEL1-214ENST00000582665 SHANK3Q9BYB0 1731 aa13.39□□□□□ -0.27
NDEL1-214ENST00000582665 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
NDEL1-214ENST00000582665 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
NDEL1-214ENST00000582665 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
NDEL1-214ENST00000582665 BCL9O00512 1426 aa13.38□□□□□ -0.27
NDEL1-214ENST00000582665 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
NDEL1-214ENST00000582665 ADAMTS8Q9UP79 889 aa13.37□□□□□ -0.27
NDEL1-214ENST00000582665 CYP27B1O15528 508 aa13.36□□□□□ -0.27
NDEL1-214ENST00000582665 PRKAR2BP31323 418 aa13.36□□□□□ -0.27
NDEL1-214ENST00000582665 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
NDEL1-214ENST00000582665 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
NDEL1-214ENST00000582665 MARCH10Q8NA82 808 aaPredicted RBP13.36□□□□□ -0.27
NDEL1-214ENST00000582665 PHACTR3Q96KR7 559 aa13.36□□□□□ -0.27
NDEL1-214ENST00000582665 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
NDEL1-214ENST00000582665 PDE3BQ13370 1112 aa13.35□□□□□ -0.27
NDEL1-214ENST00000582665 WDR43Q15061 677 aaKnown RBP eCLIP13.35□□□□□ -0.27
NDEL1-214ENST00000582665 NKX1-1Q15270 411 aaPredicted RBP13.35□□□□□ -0.27
NDEL1-214ENST00000582665 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
NDEL1-214ENST00000582665 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
NDEL1-214ENST00000582665 A0A0G2JS52 829 aa13.34□□□□□ -0.27
NDEL1-214ENST00000582665 MYT1Q01538 1121 aa13.34□□□□□ -0.27
NDEL1-214ENST00000582665 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
NDEL1-214ENST00000582665 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
NDEL1-214ENST00000582665 PNNQ9H307 717 aaKnown RBP13.34□□□□□ -0.27
NDEL1-214ENST00000582665 PHKG2P15735 406 aa13.33□□□□□ -0.28
NDEL1-214ENST00000582665 EP400Q96L91 3159 aa13.33□□□□□ -0.28
NDEL1-214ENST00000582665 IFNL2Q8IZJ0 200 aa13.32□□□□□ -0.28
NDEL1-214ENST00000582665 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
NDEL1-214ENST00000582665 RUNDC1Q96C34 613 aa13.32□□□□□ -0.28
NDEL1-214ENST00000582665 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
NDEL1-214ENST00000582665 FAM196AQ6ZSG2 479 aa13.31□□□□□ -0.28
NDEL1-214ENST00000582665 DDX54Q8TDD1 881 aaKnown RBP13.31□□□□□ -0.28
NDEL1-214ENST00000582665 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
NDEL1-214ENST00000582665 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
NDEL1-214ENST00000582665 NFE2L2Q16236 605 aa13.29□□□□□ -0.28
NDEL1-214ENST00000582665 FAM182BQ5T319 152 aa13.29□□□□□ -0.28
NDEL1-214ENST00000582665 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
NDEL1-214ENST00000582665 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
NDEL1-214ENST00000582665 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
NDEL1-214ENST00000582665 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
NDEL1-214ENST00000582665 DCAF5Q96JK2 942 aa13.28□□□□□ -0.28
NDEL1-214ENST00000582665 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
NDEL1-214ENST00000582665 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
NDEL1-214ENST00000582665 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
NDEL1-214ENST00000582665 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
NDEL1-214ENST00000582665 NEFMP07197 916 aa13.27□□□□□ -0.29
NDEL1-214ENST00000582665 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
NDEL1-214ENST00000582665 NCBP3Q53F19 620 aaKnown RBP13.27□□□□□ -0.29
NDEL1-214ENST00000582665 C1orf141Q5JVX7 400 aa13.27□□□□□ -0.29
NDEL1-214ENST00000582665 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.29
NDEL1-214ENST00000582665 SBF2Q86WG5 1849 aa13.27□□□□□ -0.29
NDEL1-214ENST00000582665 MRC1P22897 1456 aa13.26□□□□□ -0.29
NDEL1-214ENST00000582665 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
NDEL1-214ENST00000582665 FAM9BQ8IZU0 186 aa13.26□□□□□ -0.29
NDEL1-214ENST00000582665 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
NDEL1-214ENST00000582665 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 APAF1O14727 1248 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 RNMTO43148 476 aaKnown RBP13.25□□□□□ -0.29
NDEL1-214ENST00000582665 MPRIPQ6WCQ1 1025 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 LGR6Q9HBX8 967 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 DOT1LQ8TEK3 1739 aa13.25□□□□□ -0.29
NDEL1-214ENST00000582665 DLG5Q8TDM6 1919 aa13.24□□□□□ -0.29
NDEL1-214ENST00000582665 KCNQ2O43526 872 aa13.24□□□□□ -0.29
NDEL1-214ENST00000582665 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
NDEL1-214ENST00000582665 TRIM35Q9UPQ4 493 aa13.24□□□□□ -0.29
NDEL1-214ENST00000582665 PRIM1P49642 420 aaKnown RBP13.23□□□□□ -0.29
NDEL1-214ENST00000582665 RIPK4P57078 832 aa13.23□□□□□ -0.29
NDEL1-214ENST00000582665 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
NDEL1-214ENST00000582665 TRIM37O94972 964 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 CCDC27Q2M243 656 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 ACSBG1Q96GR2 724 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 RRP7AQ9Y3A4 280 aaKnown RBP13.22□□□□□ -0.29
NDEL1-214ENST00000582665 ITGB4P16144 1822 aa13.22□□□□□ -0.29
NDEL1-214ENST00000582665 TNS1Q9HBL0 1735 aaKnown RBP13.22□□□□□ -0.29
NDEL1-214ENST00000582665 LMOD3Q0VAK6 560 aa13.21□□□□□ -0.29
NDEL1-214ENST00000582665 PIGBQ92521 554 aa13.21□□□□□ -0.29
NDEL1-214ENST00000582665 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
NDEL1-214ENST00000582665 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
NDEL1-214ENST00000582665 SIPA1L3O60292 1781 aaPredicted RBP13.2□□□□□ -0.3
NDEL1-214ENST00000582665 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
NDEL1-214ENST00000582665 MCM10Q7L590 875 aa13.2□□□□□ -0.3
NDEL1-214ENST00000582665 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
NDEL1-214ENST00000582665 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
NDEL1-214ENST00000582665 BTAF1O14981 1849 aa13.19□□□□□ -0.3
NDEL1-214ENST00000582665 CABP4P57796 275 aa13.19□□□□□ -0.3
NDEL1-214ENST00000582665 TMOD3Q9NYL9 352 aa13.19□□□□□ -0.3
NDEL1-214ENST00000582665 PLSCR1O15162 318 aa13.18□□□□□ -0.3
NDEL1-214ENST00000582665 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms