RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
CDK5RAP3-223ENST00000582114 MTFR1LQ9H019 292 aa16.23■□□□□ 0.19
CDK5RAP3-223ENST00000582114 KIF20BQ96Q89 1820 aa16.23■□□□□ 0.19
CDK5RAP3-223ENST00000582114 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
CDK5RAP3-223ENST00000582114 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
CDK5RAP3-223ENST00000582114 HSP90AB2PQ58FF8 381 aa16.21■□□□□ 0.19
CDK5RAP3-223ENST00000582114 FHDC1Q9C0D6 1143 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-223ENST00000582114 SMG6Q86US8 1419 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-223ENST00000582114 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
CDK5RAP3-223ENST00000582114 CARD14Q9BXL6 1004 aa16.2■□□□□ 0.18
CDK5RAP3-223ENST00000582114 NSD2O96028 1365 aa16.19■□□□□ 0.18
CDK5RAP3-223ENST00000582114 RAPGEF4Q8WZA2 1011 aa16.19■□□□□ 0.18
CDK5RAP3-223ENST00000582114 SGIP1Q9BQI5 828 aa16.19■□□□□ 0.18
CDK5RAP3-223ENST00000582114 POLR3GLQ9BT43 218 aa16.19■□□□□ 0.18
CDK5RAP3-223ENST00000582114 SLC27A3Q5K4L6 730 aa16.18■□□□□ 0.18
CDK5RAP3-223ENST00000582114 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
CDK5RAP3-223ENST00000582114 SYT17Q9BSW7 474 aa16.18■□□□□ 0.18
CDK5RAP3-223ENST00000582114 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
CDK5RAP3-223ENST00000582114 FLT4P35916 1363 aa16.17■□□□□ 0.18
CDK5RAP3-223ENST00000582114 PPM1GO15355 546 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-223ENST00000582114 TATP17735 454 aaPredicted RBP16.17■□□□□ 0.18
CDK5RAP3-223ENST00000582114 ARXQ96QS3 562 aa16.17■□□□□ 0.18
CDK5RAP3-223ENST00000582114 INSRP06213 1382 aa16.16■□□□□ 0.18
CDK5RAP3-223ENST00000582114 KLHL34Q8N239 644 aa16.16■□□□□ 0.18
CDK5RAP3-223ENST00000582114 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
CDK5RAP3-223ENST00000582114 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
CDK5RAP3-223ENST00000582114 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
CDK5RAP3-223ENST00000582114 CCNL1Q9UK58 526 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-223ENST00000582114 UTRNP46939 3433 aa16.15■□□□□ 0.18
CDK5RAP3-223ENST00000582114 LY75O60449 1722 aa16.14■□□□□ 0.17
CDK5RAP3-223ENST00000582114 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
CDK5RAP3-223ENST00000582114 MSH5O43196 834 aa16.12■□□□□ 0.17
CDK5RAP3-223ENST00000582114 PCDH11XQ9BZA7 1347 aa16.12■□□□□ 0.17
CDK5RAP3-223ENST00000582114 PCDH11YQ9BZA8 1340 aa16.12■□□□□ 0.17
CDK5RAP3-223ENST00000582114 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 CYP27B1O15528 508 aa16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 TNNT2P45379 298 aaPredicted RBP16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 TIMELESSQ9UNS1 1208 aa16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
CDK5RAP3-223ENST00000582114 POLD1P28340 1107 aa16.1■□□□□ 0.17
CDK5RAP3-223ENST00000582114 TOGARAM1Q9Y4F4 1720 aa16.09■□□□□ 0.17
CDK5RAP3-223ENST00000582114 SLC16A10Q8TF71 515 aa16.09■□□□□ 0.17
CDK5RAP3-223ENST00000582114 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.17
CDK5RAP3-223ENST00000582114 MSL1Q68DK7 614 aa16.08■□□□□ 0.16
CDK5RAP3-223ENST00000582114 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-223ENST00000582114 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-223ENST00000582114 CLSPNQ9HAW4 1339 aa16.08■□□□□ 0.16
CDK5RAP3-223ENST00000582114 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
CDK5RAP3-223ENST00000582114 GPR162Q16538 588 aa16.07■□□□□ 0.16
CDK5RAP3-223ENST00000582114 EYA1Q99502 592 aa16.07■□□□□ 0.16
CDK5RAP3-223ENST00000582114 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
CDK5RAP3-223ENST00000582114 ANKRD26Q9UPS8 1709 aa16.07■□□□□ 0.16
CDK5RAP3-223ENST00000582114 C5P01031 1676 aa16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 MAP3K5Q99683 1374 aa16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 HSPA5P11021 654 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
CDK5RAP3-223ENST00000582114 ITGB4P16144 1822 aa16.05■□□□□ 0.16
CDK5RAP3-223ENST00000582114 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 EIF4G2P78344 907 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 ZNF784Q8NCA9 323 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 PIGBQ92521 554 aa16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 SPG7Q9UQ90 795 aa16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
CDK5RAP3-223ENST00000582114 GOLGB1Q14789 3259 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-223ENST00000582114 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-223ENST00000582114 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-223ENST00000582114 PANK3Q9H999 370 aa16.03■□□□□ 0.16
CDK5RAP3-223ENST00000582114 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
CDK5RAP3-223ENST00000582114 CHD4Q14839 1912 aa16.02■□□□□ 0.15
CDK5RAP3-223ENST00000582114 PHF14O94880 888 aa16.01■□□□□ 0.15
CDK5RAP3-223ENST00000582114 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
CDK5RAP3-223ENST00000582114 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-223ENST00000582114 AK7Q96M32 723 aa16.01■□□□□ 0.15
CDK5RAP3-223ENST00000582114 C4BP0C0L5 1744 aa16■□□□□ 0.15
CDK5RAP3-223ENST00000582114 NKX1-1Q15270 411 aaPredicted RBP16■□□□□ 0.15
CDK5RAP3-223ENST00000582114 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
CDK5RAP3-223ENST00000582114 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
CDK5RAP3-223ENST00000582114 PHKG2P15735 406 aa15.99■□□□□ 0.15
CDK5RAP3-223ENST00000582114 LOC102724428A0A0B4J2F2 783 aa15.98■□□□□ 0.15
CDK5RAP3-223ENST00000582114 SIK1P57059 783 aa15.98■□□□□ 0.15
CDK5RAP3-223ENST00000582114 IFNL2Q8IZJ0 200 aa15.98■□□□□ 0.15
CDK5RAP3-223ENST00000582114 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
CDK5RAP3-223ENST00000582114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.159e-16■■□□□ 12.5
CDK5RAP3-223ENST00000582114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-223ENST00000582114 YBX3P16989 372 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDK5RAP3-223ENST00000582114 MORC1Q86VD1 984 aa15.96■□□□□ 0.15
CDK5RAP3-223ENST00000582114 FLAD1Q8NFF5 587 aa15.96■□□□□ 0.15
CDK5RAP3-223ENST00000582114 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
CDK5RAP3-223ENST00000582114 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
CDK5RAP3-223ENST00000582114 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
CDK5RAP3-223ENST00000582114 ITPK1Q13572 414 aa15.95■□□□□ 0.14
CDK5RAP3-223ENST00000582114 ATG3Q9NT62 314 aa15.95■□□□□ 0.14
CDK5RAP3-223ENST00000582114 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
CDK5RAP3-223ENST00000582114 GNPATO15228 680 aa15.93■□□□□ 0.14
CDK5RAP3-223ENST00000582114 HMGB2P26583 209 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP3-223ENST00000582114 AEBP1Q8IUX7 1158 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms