RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
CSNK1D-212ENST00000580061 SHANK3Q9BYB0 1731 aa21.11■□□□□ 0.97
CSNK1D-212ENST00000580061 CCDC146Q8IYE0 955 aa21.1■□□□□ 0.97
CSNK1D-212ENST00000580061 RUNDC1Q96C34 613 aa21.1■□□□□ 0.97
CSNK1D-212ENST00000580061 CDCA7Q9BWT1 371 aaPredicted RBP21.1■□□□□ 0.97
CSNK1D-212ENST00000580061 LRRC37A3O60309 1634 aa21.1■□□□□ 0.97
CSNK1D-212ENST00000580061 RBM6P78332 1123 aaKnown RBP21.09■□□□□ 0.97
CSNK1D-212ENST00000580061 FAM98CQ17RN3 349 aaKnown RBP21.09■□□□□ 0.97
CSNK1D-212ENST00000580061 PHACTR3Q96KR7 559 aa21.09■□□□□ 0.97
CSNK1D-212ENST00000580061 ONECUT3O60422 494 aaPredicted RBP21.08■□□□□ 0.97
CSNK1D-212ENST00000580061 DLG5Q8TDM6 1919 aa21.08■□□□□ 0.96
CSNK1D-212ENST00000580061 NEFMP07197 916 aa21.07■□□□□ 0.96
CSNK1D-212ENST00000580061 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
CSNK1D-212ENST00000580061 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.07■□□□□ 0.96
CSNK1D-212ENST00000580061 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
CSNK1D-212ENST00000580061 AMOTQ4VCS5 1084 aa21.06■□□□□ 0.96
CSNK1D-212ENST00000580061 PLEKHO1Q53GL0 409 aaPredicted RBP21.06■□□□□ 0.96
CSNK1D-212ENST00000580061 TNS2Q63HR2 1409 aa21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 RXRBP28702 533 aa21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 MTHFSDQ2M296 383 aaKnown RBP21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 ZCRB1Q8TBF4 217 aaKnown RBP21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 SPG7Q9UQ90 795 aa21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 BRWD3Q6RI45 1802 aa21.04■□□□□ 0.96
CSNK1D-212ENST00000580061 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
CSNK1D-212ENST00000580061 EXOC5O00471 708 aa21.02■□□□□ 0.96
CSNK1D-212ENST00000580061 APAF1O14727 1248 aa21.02■□□□□ 0.96
CSNK1D-212ENST00000580061 DDB1Q16531 1140 aa21.02■□□□□ 0.96
CSNK1D-212ENST00000580061 GAS2L2Q8NHY3 880 aa21.02■□□□□ 0.96
CSNK1D-212ENST00000580061 NFE2L2Q16236 605 aa21.01■□□□□ 0.95
CSNK1D-212ENST00000580061 A0A0G2JS52 829 aa21■□□□□ 0.95
CSNK1D-212ENST00000580061 TMPOP42166 694 aaKnown RBP21■□□□□ 0.95
CSNK1D-212ENST00000580061 MYT1Q01538 1121 aa21■□□□□ 0.95
CSNK1D-212ENST00000580061 SEPT12Q8IYM1 358 aa21■□□□□ 0.95
CSNK1D-212ENST00000580061 PCDH11XQ9BZA7 1347 aa21■□□□□ 0.95
CSNK1D-212ENST00000580061 PCDH11YQ9BZA8 1340 aa21■□□□□ 0.95
CSNK1D-212ENST00000580061 ZNF530Q6P9A1 599 aaPredicted RBP20.99■□□□□ 0.95
CSNK1D-212ENST00000580061 CYP27B1O15528 508 aa20.98■□□□□ 0.95
CSNK1D-212ENST00000580061 PHKG2P15735 406 aa20.98■□□□□ 0.95
CSNK1D-212ENST00000580061 AKAP4Q5JQC9 854 aa20.98■□□□□ 0.95
CSNK1D-212ENST00000580061 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
CSNK1D-212ENST00000580061 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
CSNK1D-212ENST00000580061 RGS12O14924 1447 aa20.97■□□□□ 0.95
CSNK1D-212ENST00000580061 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
CSNK1D-212ENST00000580061 SCN11AQ9UI33 1791 aa20.97■□□□□ 0.95
CSNK1D-212ENST00000580061 ADAMTS7Q9UKP4 1686 aa20.96■□□□□ 0.95
CSNK1D-212ENST00000580061 SENP3-EIF4A1A0A087X0R7 540 aa20.96■□□□□ 0.95
CSNK1D-212ENST00000580061 RIPK4P57078 832 aa20.96■□□□□ 0.95
CSNK1D-212ENST00000580061 C1orf141Q5JVX7 400 aa20.96■□□□□ 0.95
CSNK1D-212ENST00000580061 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
CSNK1D-212ENST00000580061 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
CSNK1D-212ENST00000580061 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
CSNK1D-212ENST00000580061 NEUROD2Q15784 382 aa20.95■□□□□ 0.94
CSNK1D-212ENST00000580061 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
CSNK1D-212ENST00000580061 MARCH10Q8NA82 808 aaPredicted RBP20.94■□□□□ 0.94
CSNK1D-212ENST00000580061 NKX1-1Q15270 411 aaPredicted RBP20.93■□□□□ 0.94
CSNK1D-212ENST00000580061 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
CSNK1D-212ENST00000580061 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-212ENST00000580061 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
CSNK1D-212ENST00000580061 NGEFQ8N5V2 710 aa20.92■□□□□ 0.94
CSNK1D-212ENST00000580061 TRIM35Q9UPQ4 493 aa20.92■□□□□ 0.94
CSNK1D-212ENST00000580061 KDM6AO15550 1401 aaPredicted RBP20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 LMOD3Q0VAK6 560 aa20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 CCDC27Q2M243 656 aa20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 DOT1LQ8TEK3 1739 aa20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 SALL2Q9Y467 1007 aaPredicted RBP20.91■□□□□ 0.94
CSNK1D-212ENST00000580061 MPRIPQ6WCQ1 1025 aa20.9■□□□□ 0.94
CSNK1D-212ENST00000580061 KRT27Q7Z3Y8 459 aa20.9■□□□□ 0.94
CSNK1D-212ENST00000580061 RTF1Q92541 710 aaKnown RBP20.9■□□□□ 0.94
CSNK1D-212ENST00000580061 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
CSNK1D-212ENST00000580061 ITGB4P16144 1822 aa20.9■□□□□ 0.94
CSNK1D-212ENST00000580061 IL17REQ8NFR9 667 aa20.89■□□□□ 0.93
CSNK1D-212ENST00000580061 LGR6Q9HBX8 967 aa20.89■□□□□ 0.93
CSNK1D-212ENST00000580061 SBF2Q86WG5 1849 aa20.89■□□□□ 0.93
CSNK1D-212ENST00000580061 SIPA1L3O60292 1781 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-212ENST00000580061 RNMTO43148 476 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-212ENST00000580061 DCTN1Q14203 1278 aa20.88■□□□□ 0.93
CSNK1D-212ENST00000580061 MCM10Q7L590 875 aa20.88■□□□□ 0.93
CSNK1D-212ENST00000580061 KAT6BQ8WYB5 2073 aa20.88■□□□□ 0.93
CSNK1D-212ENST00000580061 BCL9O00512 1426 aa20.87■□□□□ 0.93
CSNK1D-212ENST00000580061 CEMIPQ8WUJ3 1361 aa20.87■□□□□ 0.93
CSNK1D-212ENST00000580061 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
CSNK1D-212ENST00000580061 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
CSNK1D-212ENST00000580061 MRC1P22897 1456 aa20.86■□□□□ 0.93
CSNK1D-212ENST00000580061 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
CSNK1D-212ENST00000580061 THUMPD2Q9BTF0 503 aaKnown RBP20.85■□□□□ 0.93
CSNK1D-212ENST00000580061 NHSQ6T4R5 1651 aa20.84■□□□□ 0.93
CSNK1D-212ENST00000580061 ERVV-2B6SEH9 535 aa20.84■□□□□ 0.93
CSNK1D-212ENST00000580061 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
CSNK1D-212ENST00000580061 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
CSNK1D-212ENST00000580061 EP400Q96L91 3159 aa20.82■□□□□ 0.92
CSNK1D-212ENST00000580061 FAM196AQ6ZSG2 479 aa20.81■□□□□ 0.92
CSNK1D-212ENST00000580061 WDR63Q8IWG1 891 aa20.81■□□□□ 0.92
CSNK1D-212ENST00000580061 SLC52A2Q9HAB3 445 aa20.81■□□□□ 0.92
CSNK1D-212ENST00000580061 CABP4P57796 275 aa20.8■□□□□ 0.92
CSNK1D-212ENST00000580061 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-212ENST00000580061 TEFQ10587 303 aa20.8■□□□□ 0.92
CSNK1D-212ENST00000580061 ACSBG1Q96GR2 724 aa20.8■□□□□ 0.92
CSNK1D-212ENST00000580061 PRIM1P49642 420 aaKnown RBP20.79■□□□□ 0.92
CSNK1D-212ENST00000580061 NFATC2IPQ8NCF5 419 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms