RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 GPBP1L1Q9HC44 474 aaPredicted RBP16.2■□□□□ 0.18
SUPT4H1-203ENST00000579289 CD2APQ9Y5K6 639 aa16.2■□□□□ 0.18
SUPT4H1-203ENST00000579289 KAT6BQ8WYB5 2073 aa16.2■□□□□ 0.18
SUPT4H1-203ENST00000579289 TOGARAM1Q9Y4F4 1720 aa16.19■□□□□ 0.18
SUPT4H1-203ENST00000579289 DDX54Q8TDD1 881 aaKnown RBP16.19■□□□□ 0.18
SUPT4H1-203ENST00000579289 PCNTO95613 3336 aa16.19■□□□□ 0.18
SUPT4H1-203ENST00000579289 MSL1Q68DK7 614 aa16.17■□□□□ 0.18
SUPT4H1-203ENST00000579289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
SUPT4H1-203ENST00000579289 IP6K1Q92551 441 aa16.17■□□□□ 0.18
SUPT4H1-203ENST00000579289 MEGF6O75095 1541 aa16.17■□□□□ 0.18
SUPT4H1-203ENST00000579289 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-203ENST00000579289 RGPD2P0DJD1 1756 aa16.16■□□□□ 0.18
SUPT4H1-203ENST00000579289 L3MBTL2Q969R5 705 aa16.16■□□□□ 0.18
SUPT4H1-203ENST00000579289 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
SUPT4H1-203ENST00000579289 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
SUPT4H1-203ENST00000579289 C5P01031 1676 aa16.15■□□□□ 0.18
SUPT4H1-203ENST00000579289 ZNF526Q8TF50 670 aaPredicted RBP16.14■□□□□ 0.17
SUPT4H1-203ENST00000579289 KIAA1551Q9HCM1 1747 aa16.14■□□□□ 0.17
SUPT4H1-203ENST00000579289 FBLN1P23142 703 aa16.11■□□□□ 0.17
SUPT4H1-203ENST00000579289 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
SUPT4H1-203ENST00000579289 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
SUPT4H1-203ENST00000579289 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
SUPT4H1-203ENST00000579289 EDC4Q6P2E9 1401 aaKnown RBP16.11■□□□□ 0.17
SUPT4H1-203ENST00000579289 UBR3Q6ZT12 1888 aa16.1■□□□□ 0.17
SUPT4H1-203ENST00000579289 ZCRB1Q8TBF4 217 aaKnown RBP16.1■□□□□ 0.17
SUPT4H1-203ENST00000579289 IGSF1Q8N6C5 1336 aa16.1■□□□□ 0.17
SUPT4H1-203ENST00000579289 HOXC9P31274 260 aa16.09■□□□□ 0.17
SUPT4H1-203ENST00000579289 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
SUPT4H1-203ENST00000579289 MAP3K19Q56UN5 1328 aa16.09■□□□□ 0.17
SUPT4H1-203ENST00000579289 A0A1W2PP64 1363 aa16.09■□□□□ 0.17
SUPT4H1-203ENST00000579289 C4BP0C0L5 1744 aa16.08■□□□□ 0.17
SUPT4H1-203ENST00000579289 APLP1P51693 650 aa16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 COL13A1Q5TAT6 717 aaPredicted RBP16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 NBPF6Q5VWK0 638 aa16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 NBPF4Q96M43 638 aa16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 USP47Q96K76 1375 aa16.07■□□□□ 0.16
SUPT4H1-203ENST00000579289 MSH5O43196 834 aa16.06■□□□□ 0.16
SUPT4H1-203ENST00000579289 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
SUPT4H1-203ENST00000579289 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
SUPT4H1-203ENST00000579289 JMYQ8N9B5 988 aa16.05■□□□□ 0.16
SUPT4H1-203ENST00000579289 ROCK2O75116 1388 aaKnown RBP16.04■□□□□ 0.16
SUPT4H1-203ENST00000579289 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
SUPT4H1-203ENST00000579289 TOMM70O94826 608 aa16.04■□□□□ 0.16
SUPT4H1-203ENST00000579289 FLAD1Q8NFF5 587 aa16.04■□□□□ 0.16
SUPT4H1-203ENST00000579289 WDR90Q96KV7 1748 aa16.04■□□□□ 0.16
SUPT4H1-203ENST00000579289 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
SUPT4H1-203ENST00000579289 CYP27B1O15528 508 aa16.02■□□□□ 0.16
SUPT4H1-203ENST00000579289 SIN3AQ96ST3 1273 aa16.02■□□□□ 0.16
SUPT4H1-203ENST00000579289 ITGB4P16144 1822 aa16.02■□□□□ 0.16
SUPT4H1-203ENST00000579289 HTRA3P83110 453 aa16.01■□□□□ 0.15
SUPT4H1-203ENST00000579289 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
SUPT4H1-203ENST00000579289 CGNL1Q0VF96 1302 aa16■□□□□ 0.15
SUPT4H1-203ENST00000579289 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
SUPT4H1-203ENST00000579289 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
SUPT4H1-203ENST00000579289 PUS7Q96PZ0 661 aaKnown RBP16■□□□□ 0.15
SUPT4H1-203ENST00000579289 NSD3Q9BZ95 1437 aa16■□□□□ 0.15
SUPT4H1-203ENST00000579289 BRCA1P38398 1863 aaKnown RBP15.99■□□□□ 0.15
SUPT4H1-203ENST00000579289 HDGFL2Q7Z4V5 671 aaPredicted RBP15.99■□□□□ 0.15
SUPT4H1-203ENST00000579289 LINC00116Q8NCU8 138 aa15.99■□□□□ 0.15
SUPT4H1-203ENST00000579289 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
SUPT4H1-203ENST00000579289 TMC1Q8TDI8 760 aa15.98■□□□□ 0.15
SUPT4H1-203ENST00000579289 KLRG1Q96E93 195 aa15.98■□□□□ 0.15
SUPT4H1-203ENST00000579289 RTL1A6NKG5 1358 aa15.98■□□□□ 0.15
SUPT4H1-203ENST00000579289 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 KCNA3P22001 575 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 SSFA2P28290 1259 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 ITPK1Q13572 414 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 PIGBQ92521 554 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
SUPT4H1-203ENST00000579289 C10orf71Q711Q0 1435 aa15.96■□□□□ 0.15
SUPT4H1-203ENST00000579289 RRS1Q15050 365 aaKnown RBP15.96■□□□□ 0.15
SUPT4H1-203ENST00000579289 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
SUPT4H1-203ENST00000579289 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
SUPT4H1-203ENST00000579289 TERF2IPQ9NYB0 399 aa15.96■□□□□ 0.15
SUPT4H1-203ENST00000579289 PHF14O94880 888 aa15.95■□□□□ 0.14
SUPT4H1-203ENST00000579289 TESK2Q96S53 571 aa15.95■□□□□ 0.14
SUPT4H1-203ENST00000579289 AMPHP49418 695 aa15.94■□□□□ 0.14
SUPT4H1-203ENST00000579289 PCDH11XQ9BZA7 1347 aa15.94■□□□□ 0.14
SUPT4H1-203ENST00000579289 PCDH11YQ9BZA8 1340 aa15.94■□□□□ 0.14
SUPT4H1-203ENST00000579289 PRELPP51888 382 aa15.93■□□□□ 0.14
SUPT4H1-203ENST00000579289 TGFB2P61812 414 aa15.93■□□□□ 0.14
SUPT4H1-203ENST00000579289 HSP90AB2PQ58FF8 381 aa15.93■□□□□ 0.14
SUPT4H1-203ENST00000579289 COG3Q96JB2 828 aa15.93■□□□□ 0.14
SUPT4H1-203ENST00000579289 AK7Q96M32 723 aa15.93■□□□□ 0.14
SUPT4H1-203ENST00000579289 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 FYB1O15117 783 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 MMP10P09238 476 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 SIK1P57059 783 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 SLC4A9Q96Q91 983 aa15.92■□□□□ 0.14
SUPT4H1-203ENST00000579289 INSRP06213 1382 aa15.91■□□□□ 0.14
SUPT4H1-203ENST00000579289 SMARCC1Q92922 1105 aaPredicted RBP15.91■□□□□ 0.14
SUPT4H1-203ENST00000579289 KDRP35968 1356 aa15.9■□□□□ 0.14
SUPT4H1-203ENST00000579289 DPEP1P16444 411 aa15.9■□□□□ 0.14
SUPT4H1-203ENST00000579289 TATP17735 454 aaPredicted RBP15.9■□□□□ 0.14
SUPT4H1-203ENST00000579289 RAPGEF4Q8WZA2 1011 aa15.9■□□□□ 0.14
SUPT4H1-203ENST00000579289 ASAP1Q9ULH1 1129 aa15.9■□□□□ 0.14
SUPT4H1-203ENST00000579289 ARFGEF1Q9Y6D6 1849 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms