RNA–Protein interactions for RNA: ENST00000579146.5

PGAP3-206, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-206ENST00000579146 PHF8Q9UPP1 1060 aa24.01■■□□□ 1.43
PGAP3-206ENST00000579146 C1orf115Q9H7X2 142 aa23.99■■□□□ 1.43
PGAP3-206ENST00000579146 GAS2L2Q8NHY3 880 aa23.98■■□□□ 1.43
PGAP3-206ENST00000579146 RTF1Q92541 710 aaKnown RBP23.98■■□□□ 1.43
PGAP3-206ENST00000579146 NWD1Q149M9 1564 aa23.97■■□□□ 1.43
PGAP3-206ENST00000579146 RTL5Q5HYW3 569 aaPredicted RBP23.97■■□□□ 1.43
PGAP3-206ENST00000579146 RBM33Q96EV2 1170 aaKnown RBP23.97■■□□□ 1.43
PGAP3-206ENST00000579146 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
PGAP3-206ENST00000579146 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
PGAP3-206ENST00000579146 RGS12O14924 1447 aa23.96■■□□□ 1.43
PGAP3-206ENST00000579146 GCC1Q96CN9 775 aa23.96■■□□□ 1.43
PGAP3-206ENST00000579146 CHD1LQ86WJ1 897 aa23.95■■□□□ 1.42
PGAP3-206ENST00000579146 INTS3Q68E01 1043 aaKnown RBP23.95■■□□□ 1.42
PGAP3-206ENST00000579146 SIRT2Q8IXJ6 389 aa23.95■■□□□ 1.42
PGAP3-206ENST00000579146 TBC1D32Q96NH3 1257 aa23.95■■□□□ 1.42
PGAP3-206ENST00000579146 MIS18AQ9NYP9 233 aa23.94■■□□□ 1.42
PGAP3-206ENST00000579146 LNPKQ9C0E8 428 aa23.94■■□□□ 1.42
PGAP3-206ENST00000579146 RTL1A6NKG5 1358 aa23.93■■□□□ 1.42
PGAP3-206ENST00000579146 HTATSF1O43719 755 aaKnown RBP23.93■■□□□ 1.42
PGAP3-206ENST00000579146 C14orf37Q86TY3 774 aa23.93■■□□□ 1.42
PGAP3-206ENST00000579146 NPHP4O75161 1426 aaPredicted RBP23.93■■□□□ 1.42
PGAP3-206ENST00000579146 LRRC37A3O60309 1634 aa23.93■■□□□ 1.42
PGAP3-206ENST00000579146 LTN1O94822 1766 aa23.93■■□□□ 1.42
PGAP3-206ENST00000579146 TSPYL4Q9UJ04 414 aa23.92■■□□□ 1.42
PGAP3-206ENST00000579146 PTPRCP08575 1304 aa23.91■■□□□ 1.42
PGAP3-206ENST00000579146 USP35Q9P2H5 1018 aa23.91■■□□□ 1.42
PGAP3-206ENST00000579146 NFAT5O94916 1531 aa23.9■■□□□ 1.42
PGAP3-206ENST00000579146 ESCO1Q5FWF5 840 aa23.9■■□□□ 1.42
PGAP3-206ENST00000579146 GNAT3A8MTJ3 354 aa23.89■■□□□ 1.41
PGAP3-206ENST00000579146 ANKRD45Q5TZF3 282 aa23.89■■□□□ 1.41
PGAP3-206ENST00000579146 LTV1Q96GA3 475 aaPredicted RBP23.88■■□□□ 1.41
PGAP3-206ENST00000579146 SLC4A2P04920 1241 aa23.88■■□□□ 1.41
PGAP3-206ENST00000579146 PSME1Q06323 249 aa23.87■■□□□ 1.41
PGAP3-206ENST00000579146 BECN1Q14457 450 aa23.86■■□□□ 1.41
PGAP3-206ENST00000579146 IP6K1Q92551 441 aa23.86■■□□□ 1.41
PGAP3-206ENST00000579146 MAP3K5Q99683 1374 aa23.85■■□□□ 1.41
PGAP3-206ENST00000579146 DEKP35659 375 aaKnown RBP23.85■■□□□ 1.41
PGAP3-206ENST00000579146 BMP2KLQ5H9B9 411 aa23.84■■□□□ 1.41
PGAP3-206ENST00000579146 MSH6P52701 1360 aa23.84■■□□□ 1.41
PGAP3-206ENST00000579146 ATP10DQ9P241 1426 aa23.84■■□□□ 1.41
PGAP3-206ENST00000579146 MFAP1P55081 439 aaKnown RBP23.83■■□□□ 1.4
PGAP3-206ENST00000579146 IL17REQ8NFR9 667 aa23.83■■□□□ 1.4
PGAP3-206ENST00000579146 PHRF1Q9P1Y6 1649 aaKnown RBP23.82■■□□□ 1.4
PGAP3-206ENST00000579146 USHBP1Q8N6Y0 703 aa23.82■■□□□ 1.4
PGAP3-206ENST00000579146 KCNH5Q8NCM2 988 aa23.82■■□□□ 1.4
PGAP3-206ENST00000579146 C22orf23Q9BZE7 217 aa23.82■■□□□ 1.4
PGAP3-206ENST00000579146 DCTPP1Q9H773 170 aa23.82■■□□□ 1.4
PGAP3-206ENST00000579146 G2E3Q7L622 706 aa23.81■■□□□ 1.4
PGAP3-206ENST00000579146 ANKRD44Q8N8A2 993 aa23.81■■□□□ 1.4
PGAP3-206ENST00000579146 NFKBIBQ15653 356 aa23.8■■□□□ 1.4
PGAP3-206ENST00000579146 ORAI2Q96SN7 254 aa23.8■■□□□ 1.4
PGAP3-206ENST00000579146 RPAP2Q8IXW5 612 aaPredicted RBP23.8■■□□□ 1.4
PGAP3-206ENST00000579146 BABAM1Q9NWV8 329 aa23.8■■□□□ 1.4
PGAP3-206ENST00000579146 NBPF6Q5VWK0 638 aa23.79■■□□□ 1.4
PGAP3-206ENST00000579146 NBPF4Q96M43 638 aa23.79■■□□□ 1.4
PGAP3-206ENST00000579146 FAM208AQ9UK61 1670 aaKnown RBP23.79■■□□□ 1.4
PGAP3-206ENST00000579146 CEP85Q6P2H3 762 aa23.78■■□□□ 1.4
PGAP3-206ENST00000579146 MEIS3Q99687 375 aa23.78■■□□□ 1.4
PGAP3-206ENST00000579146 PRKCSHP14314 528 aaPredicted RBP23.78■■□□□ 1.4
PGAP3-206ENST00000579146 TAF7Q15545 349 aaPredicted RBP23.78■■□□□ 1.4
PGAP3-206ENST00000579146 STK31Q9BXU1 1019 aa23.78■■□□□ 1.4
PGAP3-206ENST00000579146 SOS1Q07889 1333 aaPredicted RBP23.77■■□□□ 1.4
PGAP3-206ENST00000579146 TBC1D2Q9BYX2 928 aa23.76■■□□□ 1.39
PGAP3-206ENST00000579146 SLIT3O75094 1523 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 F6X3S4 739 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 CCT4P50991 539 aaKnown RBP23.75■■□□□ 1.39
PGAP3-206ENST00000579146 CCDC30Q5VVM6 783 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 CEMIPQ8WUJ3 1361 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 RGPD2P0DJD1 1756 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 CACNA1FO60840 1977 aa23.75■■□□□ 1.39
PGAP3-206ENST00000579146 XPCQ01831 940 aaPredicted RBP23.74■■□□□ 1.39
PGAP3-206ENST00000579146 SLC4A10Q6U841 1118 aa23.74■■□□□ 1.39
PGAP3-206ENST00000579146 ZBTB7CA1YPR0 619 aa23.73■■□□□ 1.39
PGAP3-206ENST00000579146 GCP02774 474 aa23.73■■□□□ 1.39
PGAP3-206ENST00000579146 FLIIQ13045 1269 aa23.72■■□□□ 1.39
PGAP3-206ENST00000579146 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
PGAP3-206ENST00000579146 TRPM3Q9HCF6 1732 aaPredicted RBP23.72■■□□□ 1.39
PGAP3-206ENST00000579146 ARHGEF25Q86VW2 580 aa23.72■■□□□ 1.39
PGAP3-206ENST00000579146 MED1Q15648 1581 aaPredicted RBP23.71■■□□□ 1.39
PGAP3-206ENST00000579146 PLEKHM2Q8IWE5 1019 aa23.71■■□□□ 1.39
PGAP3-206ENST00000579146 RBM25P49756 843 aaKnown RBP23.71■■□□□ 1.39
PGAP3-206ENST00000579146 LRRC59Q96AG4 307 aaKnown RBP23.7■■□□□ 1.38
PGAP3-206ENST00000579146 C1orf167Q5SNV9 1468 aa23.69■■□□□ 1.38
PGAP3-206ENST00000579146 KIF1AQ12756 1690 aa23.69■■□□□ 1.38
PGAP3-206ENST00000579146 FKBP5Q13451 457 aaPredicted RBP23.69■■□□□ 1.38
PGAP3-206ENST00000579146 NECTIN2Q92692 538 aa23.69■■□□□ 1.38
PGAP3-206ENST00000579146 ANTXR1Q9H6X2 564 aa23.69■■□□□ 1.38
PGAP3-206ENST00000579146 LMO7Q8WWI1 1683 aa23.69■■□□□ 1.38
PGAP3-206ENST00000579146 TBC1D9Q6ZT07 1266 aa23.68■■□□□ 1.38
PGAP3-206ENST00000579146 NCAPD2Q15021 1401 aa23.68■■□□□ 1.38
PGAP3-206ENST00000579146 SLKQ9H2G2 1235 aaPredicted RBP23.68■■□□□ 1.38
PGAP3-206ENST00000579146 GSPT1P15170 499 aaKnown RBP23.67■■□□□ 1.38
PGAP3-206ENST00000579146 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
PGAP3-206ENST00000579146 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
PGAP3-206ENST00000579146 KRT28Q7Z3Y7 464 aa23.67■■□□□ 1.38
PGAP3-206ENST00000579146 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
PGAP3-206ENST00000579146 N4BP2Q86UW6 1770 aaPredicted RBP23.66■■□□□ 1.38
PGAP3-206ENST00000579146 HMMRO75330 724 aa23.66■■□□□ 1.38
PGAP3-206ENST00000579146 FRAT2O75474 233 aaPredicted RBP23.66■■□□□ 1.38
PGAP3-206ENST00000579146 C16orf71Q8IYS4 520 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms