RNA–Protein interactions for RNA: ENST00000578307.1

BPTF-211, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 2,121 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-211ENST00000578307 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
BPTF-211ENST00000578307 ELL2O00472 640 aaPredicted RBP12.17□□□□□ -0.46
BPTF-211ENST00000578307 AMPHP49418 695 aa12.17□□□□□ -0.46
BPTF-211ENST00000578307 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
BPTF-211ENST00000578307 DCTN1Q14203 1278 aa12.17□□□□□ -0.46
BPTF-211ENST00000578307 USP54Q70EL1 1684 aa12.17□□□□□ -0.46
BPTF-211ENST00000578307 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
BPTF-211ENST00000578307 NLRP6P59044 892 aa12.16□□□□□ -0.46
BPTF-211ENST00000578307 HSP90AA2PQ14568 343 aaPredicted RBP12.16□□□□□ -0.46
BPTF-211ENST00000578307 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
BPTF-211ENST00000578307 ADAMTSL3P82987 1691 aa12.15□□□□□ -0.46
BPTF-211ENST00000578307 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
BPTF-211ENST00000578307 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.47
BPTF-211ENST00000578307 API5Q9BZZ5 524 aaKnown RBP12.14□□□□□ -0.47
BPTF-211ENST00000578307 SMC5Q8IY18 1101 aa12.14□□□□□ -0.47
BPTF-211ENST00000578307 KDRP35968 1356 aa12.13□□□□□ -0.47
BPTF-211ENST00000578307 MCM10Q7L590 875 aa12.13□□□□□ -0.47
BPTF-211ENST00000578307 ABCC4O15439 1325 aa12.13□□□□□ -0.47
BPTF-211ENST00000578307 CHL1O00533 1208 aa12.13□□□□□ -0.47
BPTF-211ENST00000578307 ABTB2Q8N961 1025 aa12.13□□□□□ -0.47
BPTF-211ENST00000578307 RTF1Q92541 710 aaKnown RBP12.13□□□□□ -0.47
BPTF-211ENST00000578307 IGSF1Q8N6C5 1336 aa12.12□□□□□ -0.47
BPTF-211ENST00000578307 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
BPTF-211ENST00000578307 ZBTB7BO15156 539 aaPredicted RBP12.12□□□□□ -0.47
BPTF-211ENST00000578307 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
BPTF-211ENST00000578307 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
BPTF-211ENST00000578307 GAS2L2Q8NHY3 880 aa12.11□□□□□ -0.47
BPTF-211ENST00000578307 EYA1Q99502 592 aa12.11□□□□□ -0.47
BPTF-211ENST00000578307 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
BPTF-211ENST00000578307 NUTM2GQ5VZR2 741 aa12.11□□□□□ -0.47
BPTF-211ENST00000578307 CRB1P82279 1406 aa12.11□□□□□ -0.47
BPTF-211ENST00000578307 LTN1O94822 1766 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 HOXC9P31274 260 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 ADGRL3Q9HAR2 1447 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 SEC24BO95487 1268 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 TAF7LQ5H9L4 462 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 USP19O94966 1318 aa12.1□□□□□ -0.47
BPTF-211ENST00000578307 GCC1Q96CN9 775 aa12.09□□□□□ -0.47
BPTF-211ENST00000578307 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
BPTF-211ENST00000578307 NPHP4O75161 1426 aaPredicted RBP12.08□□□□□ -0.47
BPTF-211ENST00000578307 FOXO3O43524 673 aa12.08□□□□□ -0.47
BPTF-211ENST00000578307 NUCB1Q02818 461 aa12.08□□□□□ -0.47
BPTF-211ENST00000578307 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
BPTF-211ENST00000578307 HSP90AA1P07900 732 aaKnown RBP12.08□□□□□ -0.48
BPTF-211ENST00000578307 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
BPTF-211ENST00000578307 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
BPTF-211ENST00000578307 PTPRCP08575 1304 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 CHD1LQ86WJ1 897 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 C1orf115Q9H7X2 142 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 PSME1Q06323 249 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 ESCO1Q5FWF5 840 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 RBM33Q96EV2 1170 aaKnown RBP12.07□□□□□ -0.48
BPTF-211ENST00000578307 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
BPTF-211ENST00000578307 INTS3Q68E01 1043 aaKnown RBP12.06□□□□□ -0.48
BPTF-211ENST00000578307 GNAT3A8MTJ3 354 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 BECN1Q14457 450 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
BPTF-211ENST00000578307 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 A0A0U1RQG5 324 aaPredicted RBP12.05□□□□□ -0.48
BPTF-211ENST00000578307 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 TBC1D32Q96NH3 1257 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 MIS18AQ9NYP9 233 aa12.05□□□□□ -0.48
BPTF-211ENST00000578307 NFAT5O94916 1531 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 RGS12O14924 1447 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 MAP3K5Q99683 1374 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 IP6K1Q92551 441 aa12.04□□□□□ -0.48
BPTF-211ENST00000578307 SIRT2Q8IXJ6 389 aa12.03□□□□□ -0.48
BPTF-211ENST00000578307 PHRF1Q9P1Y6 1649 aaKnown RBP12.03□□□□□ -0.48
BPTF-211ENST00000578307 CACNA1FO60840 1977 aa12.03□□□□□ -0.48
BPTF-211ENST00000578307 ARXQ96QS3 562 aa12.02□□□□□ -0.48
BPTF-211ENST00000578307 MAPK8IP2Q13387 824 aaPredicted RBP12.02□□□□□ -0.49
BPTF-211ENST00000578307 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
BPTF-211ENST00000578307 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
BPTF-211ENST00000578307 MSH6P52701 1360 aa12.01□□□□□ -0.49
BPTF-211ENST00000578307 FAM208AQ9UK61 1670 aaKnown RBP12.01□□□□□ -0.49
BPTF-211ENST00000578307 SOS1Q07889 1333 aaPredicted RBP12.01□□□□□ -0.49
BPTF-211ENST00000578307 MFAP1P55081 439 aaKnown RBP12.01□□□□□ -0.49
BPTF-211ENST00000578307 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
BPTF-211ENST00000578307 RPAP2Q8IXW5 612 aaPredicted RBP12.01□□□□□ -0.49
BPTF-211ENST00000578307 C22orf23Q9BZE7 217 aa12.01□□□□□ -0.49
BPTF-211ENST00000578307 ZBTB7CA1YPR0 619 aa12□□□□□ -0.49
BPTF-211ENST00000578307 USHBP1Q8N6Y0 703 aa12□□□□□ -0.49
BPTF-211ENST00000578307 ANKRD44Q8N8A2 993 aa12□□□□□ -0.49
BPTF-211ENST00000578307 KIF1AQ12756 1690 aa12□□□□□ -0.49
BPTF-211ENST00000578307 RGPD2P0DJD1 1756 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 TAF7Q15545 349 aaPredicted RBP11.99□□□□□ -0.49
BPTF-211ENST00000578307 CCDC30Q5VVM6 783 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 IL17REQ8NFR9 667 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 CCT4P50991 539 aaKnown RBP11.99□□□□□ -0.49
BPTF-211ENST00000578307 PROSER2Q86WR7 435 aaPredicted RBP11.99□□□□□ -0.49
BPTF-211ENST00000578307 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
BPTF-211ENST00000578307 SLIT3O75094 1523 aa11.98□□□□□ -0.49
BPTF-211ENST00000578307 G2E3Q7L622 706 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms