RNA–Protein interactions for RNA: ENST00000578259.1

MTMR4-202, Transcript of myotubularin related protein 4, humanhuman

TSL 2

Gene MTMR4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTMR4-202ENST00000578259 PCDHGC3Q9UN70 934 aa4.59□□□□□ -1.67
MTMR4-202ENST00000578259 IQSEC3Q9UPP2 1182 aaPredicted RBP4.59□□□□□ -1.67
MTMR4-202ENST00000578259 ERCC6Q03468 1493 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 MYOM3Q5VTT5 1437 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 RAB3GAP2Q9H2M9 1393 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 USP17L3A6NCW0 530 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 USP17L4A6NCW7 530 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 CENPBP07199 599 aaPredicted RBP4.58□□□□□ -1.68
MTMR4-202ENST00000578259 SOX11P35716 441 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 SEMA3FQ13275 785 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 C6orf132Q5T0Z8 1188 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 USP17L2Q6R6M4 530 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 USP17L1Q7RTZ2 530 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 EXOC8Q8IYI6 725 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 FAM174AQ8TBP5 190 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 PRKAG2Q9UGJ0 569 aa4.58□□□□□ -1.68
MTMR4-202ENST00000578259 TMA7Q9Y2S6 64 aaKnown RBP4.58□□□□□ -1.68
MTMR4-202ENST00000578259 SYNJ2O15056 1496 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 GRIN2AQ12879 1464 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 TCOF1Q13428 1488 aaKnown RBP4.57□□□□□ -1.68
MTMR4-202ENST00000578259 NCOA2Q15596 1464 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 AKNAQ7Z591 1439 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 SCAMP3O14828 347 aaKnown RBP4.57□□□□□ -1.68
MTMR4-202ENST00000578259 GUCA2AQ02747 115 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 FAM50AQ14320 339 aaKnown RBP4.57□□□□□ -1.68
MTMR4-202ENST00000578259 PTPROQ16827 1216 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 JAZF1Q86VZ6 243 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 NUTM1Q86Y26 1132 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 NT5DC4Q86YG4 428 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 HLA-CQ95604 372 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 ASB16Q96NS5 453 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 FAM198AQ9UFP1 575 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 LRRIQ1Q96JM4 1722 aa4.57□□□□□ -1.68
MTMR4-202ENST00000578259 EPRSP07814 1512 aaKnown RBP4.56□□□□□ -1.68
MTMR4-202ENST00000578259 HFM1A2PYH4 1435 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 CARMIL2Q6F5E8 1435 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 RCCD1A6NED2 376 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 USP17L5A8MUK1 530 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 CFAP99D6REC4 459 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 C3orf80F5H4A9 247 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 H3BRB1 525 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 MAPK1P28482 360 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 TNNI2P48788 182 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 PRSS12P56730 875 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 NR6A1Q15406 480 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 SULF1Q8IWU6 871 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 KCNB2Q92953 911 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 EVI5LQ96CN4 794 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 FAM161BQ96MY7 647 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 EYA1Q99502 592 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 TUT1Q9H6E5 874 aaKnown RBP4.56□□□□□ -1.68
MTMR4-202ENST00000578259 KIAA0556O60303 1618 aa4.56□□□□□ -1.68
MTMR4-202ENST00000578259 EIF4G3O43432 1585 aaKnown RBP4.56□□□□□ -1.68
MTMR4-202ENST00000578259 ZNF608Q9ULD9 1512 aaPredicted RBP4.56□□□□□ -1.68
MTMR4-202ENST00000578259 UACAQ9BZF9 1416 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 PTPN23Q9H3S7 1636 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 ICMTO60725 284 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 PEX14O75381 377 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 ABL1P00519 1130 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 P4HBP07237 508 aaKnown RBP4.55□□□□□ -1.68
MTMR4-202ENST00000578259 GTF2F1P35269 517 aaKnown RBP eCLIP4.55□□□□□ -1.68
MTMR4-202ENST00000578259 PBX2P40425 430 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 ARHGAP4P98171 946 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 PLEKHM2Q8IWE5 1019 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 SLC43A3Q8NBI5 491 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 CHMP7Q8WUX9 453 aaPredicted RBP4.55□□□□□ -1.68
MTMR4-202ENST00000578259 CDCA7LQ96GN5 454 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 ACBD3Q9H3P7 528 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 ZBTB3Q9H5J0 574 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 DMGDHQ9UI17 866 aaKnown RBP4.55□□□□□ -1.68
MTMR4-202ENST00000578259 DISP1Q96F81 1524 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 NUP160Q12769 1436 aa4.55□□□□□ -1.68
MTMR4-202ENST00000578259 RAPGEF6Q8TEU7 1601 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 DDX11L8A8MPP1 907 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 SKIP12755 728 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 ITGAEP38570 1179 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 FANCCQ00597 558 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 SLFNL1Q499Z3 407 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 EAPPQ56P03 285 aaPredicted RBP4.54□□□□□ -1.68
MTMR4-202ENST00000578259 ZNF746Q6NUN9 644 aaPredicted RBP4.54□□□□□ -1.68
MTMR4-202ENST00000578259 GPR153Q6NV75 609 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 PPP1R18Q6NYC8 613 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 TAS1R3Q7RTX0 852 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 C1orf216Q8TAB5 229 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 PMFBP1Q8TBY8 1022 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 FAM200AQ8TCP9 573 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 MYH16Q9H6N6 1097 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 CAPN10Q9HC96 672 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 MKRN1Q9UHC7 482 aaKnown RBP4.54□□□□□ -1.68
MTMR4-202ENST00000578259 PCDHGA4Q9Y5G9 962 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 MAPKBP1O60336 1514 aa4.54□□□□□ -1.68
MTMR4-202ENST00000578259 ROCK1Q13464 1354 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 hCG_2014768A0A024R1R8 64 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 HOXA2O43364 376 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 LZTS3O60299 673 aaPredicted RBP4.53□□□□□ -1.68
MTMR4-202ENST00000578259 DKK1O94907 266 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 IGBP1P78318 339 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 RBL2Q08999 1139 aa4.53□□□□□ -1.68
MTMR4-202ENST00000578259 MTMR3Q13615 1198 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms