RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 TMEM132EQ6IEE7 984 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
SEC22B-201ENST00000578049 GOLGA6L9A6NEM1 432 aa12.62□□□□□ -0.39
SEC22B-201ENST00000578049 KIF1BPQ96EK5 621 aa12.62□□□□□ -0.39
SEC22B-201ENST00000578049 DNAJC2Q99543 621 aaKnown RBP12.62□□□□□ -0.39
SEC22B-201ENST00000578049 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
SEC22B-201ENST00000578049 JAKMIP1Q96N16 626 aaKnown RBP12.62□□□□□ -0.39
SEC22B-201ENST00000578049 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
SEC22B-201ENST00000578049 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
SEC22B-201ENST00000578049 TUBB4AP04350 444 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 AIMP1Q12904 312 aaKnown RBP12.61□□□□□ -0.39
SEC22B-201ENST00000578049 HS1BP3Q53T59 392 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 PRDM2Q13029 1718 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
SEC22B-201ENST00000578049 GNL3LQ9NVN8 582 aaKnown RBP12.61□□□□□ -0.39
SEC22B-201ENST00000578049 CEP131Q9UPN4 1083 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 NSD2O96028 1365 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
SEC22B-201ENST00000578049 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
SEC22B-201ENST00000578049 CCDC148Q8NFR7 591 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 TNPO1Q92973 898 aaKnown RBP12.6□□□□□ -0.39
SEC22B-201ENST00000578049 MX1P20591 662 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 CCDC83Q8IWF9 413 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
SEC22B-201ENST00000578049 CCDC57Q2TAC2 916 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 INCENPQ9NQS7 918 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 SRGAP3O43295 1099 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 SYCP1Q15431 976 aa12.6□□□□□ -0.39
SEC22B-201ENST00000578049 IL16Q14005 1332 aa12.59□□□□□ -0.39
SEC22B-201ENST00000578049 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
SEC22B-201ENST00000578049 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
SEC22B-201ENST00000578049 DDX11Q96FC9 970 aa12.58□□□□□ -0.39
SEC22B-201ENST00000578049 PRAM1Q96QH2 718 aa12.58□□□□□ -0.39
SEC22B-201ENST00000578049 NLRP2Q9NX02 1062 aa12.58□□□□□ -0.39
SEC22B-201ENST00000578049 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
SEC22B-201ENST00000578049 CEBPZQ03701 1054 aaKnown RBP12.58□□□□□ -0.4
SEC22B-201ENST00000578049 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 TTC39AQ5SRH9 613 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
SEC22B-201ENST00000578049 ATP2B1P20020 1258 aa12.58□□□□□ -0.4
SEC22B-201ENST00000578049 BMP2KQ9NSY1 1161 aaPredicted RBP12.58□□□□□ -0.4
SEC22B-201ENST00000578049 NSD3Q9BZ95 1437 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 CCDC69A6NI79 296 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 UBE2Q2Q8WVN8 375 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
SEC22B-201ENST00000578049 DUSP27Q5VZP5 1158 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 PHAXQ9H814 394 aaKnown RBP12.57□□□□□ -0.4
SEC22B-201ENST00000578049 AACSQ86V21 672 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 SSH1Q8WYL5 1049 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 KIF5CO60282 957 aa12.57□□□□□ -0.4
SEC22B-201ENST00000578049 KIF6Q6ZMV9 814 aa12.56□□□□□ -0.4
SEC22B-201ENST00000578049 RTEL1-TNFRSF6BF6WH68 1400 aa12.56□□□□□ -0.4
SEC22B-201ENST00000578049 HDAC1Q13547 482 aaPredicted RBP12.56□□□□□ -0.4
SEC22B-201ENST00000578049 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
SEC22B-201ENST00000578049 CEP126Q9P2H0 1117 aa12.56□□□□□ -0.4
SEC22B-201ENST00000578049 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 BMS1Q14692 1282 aaKnown RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 AFAP1Q8N556 730 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 ARHGAP45Q92619 1136 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 TAF4BQ92750 862 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 PTPRCP08575 1304 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 CCDC196A0A1B0GTZ2 297 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 TNNT1P13805 278 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 SNX21Q969T3 373 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 KRT18P05783 430 aaKnown RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 MICALCLQ6ZW33 695 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 TATP17735 454 aaPredicted RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 UBE2HP62256 183 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 JAKMIP3Q5VZ66 844 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 CWC27Q6UX04 472 aaKnown RBP12.55□□□□□ -0.4
SEC22B-201ENST00000578049 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
SEC22B-201ENST00000578049 STK3Q13188 491 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 CCDC171Q6TFL3 1326 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 SSFA2P28290 1259 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 RAD21O60216 631 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 ZFYVE27Q5T4F4 411 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 ABTB2Q8N961 1025 aa12.54□□□□□ -0.4
SEC22B-201ENST00000578049 EPRSP07814 1512 aaKnown RBP12.54□□□□□ -0.4
SEC22B-201ENST00000578049 TOP1P11387 765 aaKnown RBP12.53□□□□□ -0.4
SEC22B-201ENST00000578049 ANAPC15P60006 121 aa12.53□□□□□ -0.4
SEC22B-201ENST00000578049 TUBB4BP68371 445 aa12.53□□□□□ -0.4
SEC22B-201ENST00000578049 CCDC150Q8NCX0 1101 aa12.53□□□□□ -0.4
SEC22B-201ENST00000578049 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
SEC22B-201ENST00000578049 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
SEC22B-201ENST00000578049 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
SEC22B-201ENST00000578049 SOGA3Q5TF21 947 aa12.53□□□□□ -0.4
SEC22B-201ENST00000578049 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
SEC22B-201ENST00000578049 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms